| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 44.4% | 85.6 / 52.9 | 81 | intergenic (+139/‑75) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (36/9); new base A (0/36); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.58e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAA > NC_000913/5012‑5308 | catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAAt < 2:1114512/151‑1 (MQ=255)catcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAAt > 2:369277/1‑151 (MQ=255) caGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATaa < 2:1172898/150‑1 (MQ=255) tAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATaacaac > 1:931192/1‑151 (MQ=255) tAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATaacaa > 1:839441/1‑150 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAcc > 1:1124824/1‑151 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAcc < 1:660349/151‑1 (MQ=255) aaaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAcc < 1:873043/151‑1 (MQ=255) aaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAccg > 1:513566/1‑151 (MQ=255) aaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAccgc > 1:358155/1‑151 (MQ=255) tCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAccgccg > 1:395659/1‑151 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAccgcc < 2:749409/147‑1 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAAccgcc < 1:1208231/147‑1 (MQ=255) tCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTtctc > 1:602010/1‑151 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTtctc > 2:9450/1‑150 (MQ=255) aTTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCAt > 1:583292/1‑151 (MQ=255) tctcAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCg > 1:963231/1‑149 (MQ=255) aaTCGGGCGGGTTTTGTTTTTATGCAGCCCGTTTTTTTTATAAAAAAATTAGGGAAAAAAATGACAGGA‑AAAAA‑GGAAAAATTCTCAATAAAGGGGTTAATTT‑AGAGATTAGGTTGGGGGAAAATAACAACCGCCGTTCTCATCg < 1:177808/145‑1 (MQ=255) aTCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAAtc > 1:475502/1‑151 (MQ=255) tCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAAtct > 2:484902/1‑151 (MQ=255) ggCGGGGTTTGTTTTTATGCACCCCGGTTTTTTTAAAAAAAAATTAGGGAAAAAAATGAAAGGA‑AAAAA‑GAAAAAATTCTAAAAAAAGGCGGTAACTT‑AGAAATTAGGATGGCGGAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTcc < 2:884691/150‑1 (MQ=255) gggTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGat > 1:1251786/1‑150 (MQ=255) tttttttttATGCAGCCCGGTTTTTTTATGAAGAAATTATGGAAAAAAATGACAGGA‑AAAAA‑GGAAAAATCCTAAAAAAATGCGGTAACTT‑AGAGTTTAGGATGGGGGAGAATAAAAACCGCCGTTCTCATCGAGTAATCTCCGGatat < 1:945853/144‑1 (MQ=255) ttATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCAt > 2:447396/1‑150 (MQ=255) ttATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTCCTCATCGAGTAATCTCCGGATATCGACCCAt < 1:1202595/150‑1 (MQ=255) tATGCAGCCCGGTTTTTTTAAAAAAAAATTAGGGAAAAAAAGGACAGGA‑AAAAA‑GGAAAAATTCTCAATAAAGGCGTAAATTT‑AGAAATTAGGATTGGGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATa < 1:442460/150‑1 (MQ=255) ccgggtttttttATAAAAAAATTATGGAAAAAAAGGACAGGA‑AAAAA‑GGAAAAATTCTAAAAAAAGGCGGTAATTT‑AGAGATTAGGTTGGGGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCaa < 1:445899/145‑1 (MQ=255) gttttttttATAAAAAAATTAGGGAAAAAAATGACAGGA‑AAAAA‑GGAAAATTTCCAAAAAAATGCGTTAATTA‑AGATATTAGGATTGCGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAAt < 2:813006/146‑1 (MQ=255) gtttttttaATAAAAAAATTAGGAAAAAAAAAGACAGGA‑AAAAA‑GGAAAAATTCTAAAAAAAGGCGTTAACTA‑AGAGATTAGGATGGCGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATg < 2:1258533/147‑1 (MQ=255) tttttttATAAAAAAATTATGAAAAAAAAGGAAAGGA‑AAAAA‑GGAAAAATTCACAAAAAATGCGATAATTT‑AGAAATTGGGATTGGGGAAAAAAACACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGa < 2:281580/148‑1 (MQ=255) ttttttATAAAAAAATAAGGAAAAAAAAGGACAGGA‑AAAAA‑GAAAAATTCCAAAATAAAGGCGGTAACTA‑AGAAATAAGGATTGCGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGa < 2:1127629/148‑1 (MQ=255) tttttATAAAAAAATTATGGAAAAAAAGGACAGGA‑AAAAA‑GGAGAAATTCTAAAAAAAGGCGTTAACTA‑AAAGATTAGGATTGCGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaa < 1:503634/150‑1 (MQ=255) ttttATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa > 1:287309/1‑150 (MQ=255) ttttATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa > 1:996502/1‑150 (MQ=255) tttaaaaaaaaaaTAAGGGAAAAAAATGAAAGGA‑AAAAA‑GGA‑AAATTCTAAAAAAAATGGGTAAATTAAGATTTTAGGATGGGGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaa < 2:501039/140‑1 (MQ=255) ttaaggaagaaTTTTGGAAAAAAAATGCAGGGAAAAAA‑AGAAAAATTCTTAATAATGGCGTTAATTT‑AGAGATTAGGATTGCGGAAAATAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATaaaa < 1:777273/141‑1 (MQ=255) agaaagaaATTATGGAAAAAAATGACAGGA‑AAAAA‑GGAAAAATTCTAAAAAAAGGCGGTAATTA‑AGAAATTAGGATGGGGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGa < 1:550386/147‑1 (MQ=255) aTGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg > 1:1188611/1‑149 (MQ=255) aggaaATTATGAAAAAAAATGACAGGA‑AAAAA‑GAAAAAATCCTAAAAAAATGGGGTAATTT‑AGAGATTAGGATTGCGAAAAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAgg < 1:1182848/144‑1 (MQ=255) aaaaaaTTAGGAAAAAAAATGACAGGA‑AAAAA‑GAAAAAATTCTAAAAAAAGGCGGTAATTA‑AGAAATTAGGATTGCGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGt < 2:669642/146‑1 (MQ=255) gaaATTATGGCGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAAcc > 2:462967/1‑151 (MQ=255) aaTTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 2:1225397/1‑151 (MQ=255) ttATGAAAAAAAAGGAAAGGA‑AAAAA‑GAAAAAATTCTAAAAAAGGGCGTTAATTT‑AGAGATTAGGATTGGGAAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtgt < 1:1047402/150‑1 (MQ=255) taagagaaaaaaaaGACAGAA‑AAAAA‑AGAAAAATTCACAAAAAATGCGAAAATTA‑AGAAATGAGGATGGCGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg < 2:296424/141‑1 (MQ=255) aTGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGa > 1:26393/1‑150 (MQ=255) aaaaaaaTGAAAGAG‑AAAAA‑GGAAAAATTCTCAAAAATTGCGGTAACTT‑AGAGATTAGGATTGGGAAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaaa < 2:1059263/148‑1 (MQ=255) aaaaaggaaCAGGG‑AAAAA‑GAAAAAACTGCAAATAAGTGCTTTAACTG‑ATAAATTGGGATGGAAGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGa < 2:666011/143‑1 (MQ=255) aaaaaTGAAAGGA‑AAAAA‑GAAAAAATCCAAAAAAAAGGCGTTAATTA‑AGAGATTGGGTTGGGGGAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGAt < 1:1202237/151‑1 (MQ=255) gACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc > 1:20249/1‑151 (MQ=255) gACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATc > 1:218612/1‑151 (MQ=255) aggg‑aaaaagggaaaaTTTCACAAAAAGTGCGATAACTT‑AGAATTTGGGATGGCAGAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTa < 2:439082/151‑1 (MQ=255) ggaaaaaa‑GGAAAAATTCTCAAAAAATGGGGAAATTT‑AGAGATTGGGATGGCGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTAt < 1:272640/147‑1 (MQ=255) ggaaaaaa‑GGAAAAATTCTAAAAAAAGGGGGTAATTT‑AGAGATTAGGATTGCGGAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCt < 1:861882/145‑1 (MQ=255) ggaaaaaa‑GGAAAAATTCAAAATAAATGCGTTAACTG‑AGATATTAGGTTTGGGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTa < 2:279736/146‑1 (MQ=255) aaaaaa‑GGAAAAATTCTAAAAAAAGGGGGTAACTT‑AGAAATTAGGTTTGGGGAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCg < 1:1235385/149‑1 (MQ=255) aaaaa‑GGAAAAATTCTCAAAAAGGGCTTTAACTA‑GGATATTGGGATGGGGGAAAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATAAATCg < 1:132352/149‑1 (MQ=255) aaaaa‑GAAAAAATTCAAAAAAAATGCGTAAACTT‑AGAGATGAGGATTGAGAAAAAAAACACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATc < 2:1124810/148‑1 (MQ=255) aaa‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACt > 1:6970/1‑151 (MQ=255) aaa‑GGAAAAATTCAAAATAAATGGGGAAACTA‑AGAATTGGGGATTGCGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACt < 1:933272/151‑1 (MQ=255) aaaaaTTCTAAAAAAATGCGGTAACTT‑AGAGATTAGGATTGGGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCAc < 1:532156/149‑1 (MQ=255) gaAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 1:167648/1‑151 (MQ=255) gaAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 2:1120757/1‑151 (MQ=255) aaaTTCTAAAAAAATGCGTTAACTT‑AAAGATTAGGATGGGGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt < 1:708731/150‑1 (MQ=255) cAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTgg > 1:1234778/1‑151 (MQ=255) aaaaaagggggTAATTA‑AGAGTTTAGGATTGGGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTgg < 1:899924/141‑1 (MQ=255) aaaaaggggtaaattt‑AGAGATTAGGATGGGGGAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt < 1:507967/137‑1 (MQ=255) aTAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 1:329075/1‑151 (MQ=255) tAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTc > 1:1182700/1‑151 (MQ=255) aaCTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc > 1:860912/1‑151 (MQ=255) tt‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCAt > 1:66116/1‑151 (MQ=255) agaTTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgc > 1:224891/1‑150 (MQ=255) aTTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcag > 1:386651/1‑150 (MQ=255) ttAGGTTGGGGGAAAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc < 1:129822/150‑1 (MQ=255) tAGAATTGAGGAAAATACAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagca < 1:1031244/150‑1 (MQ=255) ggATGGCGAAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcaca < 2:1062823/150‑1 (MQ=255) gATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAgg > 2:1021965/1‑151 (MQ=255) gATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAgg > 1:753655/1‑151 (MQ=255) tgggggAAAAAAAAAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGgcagc < 1:786581/140‑1 (MQ=255) gggaagaAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGATGc < 2:358084/147‑1 (MQ=255) gCGGAAAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGc < 1:344479/151‑1 (MQ=255) ggAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg > 1:791935/1‑151 (MQ=255) ggAAAAAAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTg < 1:1168713/148‑1 (MQ=255) gagaATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg > 1:118035/1‑150 (MQ=255) gagaATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCg > 1:908933/1‑149 (MQ=255) gagaAAAAAACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGc < 1:43592/148‑1 (MQ=255) gaATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGaa > 2:1235683/1‑150 (MQ=255) | CATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATGACAGGG‑AAAAA‑GGAGAAATTCTCAATAAATGCGGTAACTT‑AGAGATTAGGATTGCGGAGAATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAA > NC_000913/5012‑5308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |