| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 993,917 | 0 | A | C | 44.3% | 110.5 / 26.0 | 70 | V43G (GTG→GGG) | ssuB | aliphatic sulfonate ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base A (35/4); new base C (0/31); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCAAATG > NC_000913/993770‑994064 | aGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCccacca < 2:931716/151‑1 (MQ=255) aGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCg > 2:521674/1‑151 (MQ=255) gcgcATCCTGAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCcac > 1:345549/1‑151 (MQ=255) gAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGAcc > 2:602068/1‑151 (MQ=255) aaaCATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCt > 1:1009163/1‑151 (MQ=255) accatcatTCGCGTTTCTCCCTAAATTTCAG‑CCGGGGGTGGGGCCCCC‑GCTAACACCCCGCGTGGGGTT‑GGCT‑TTC‑CGAGCCCTG‑CC‑AGCGGGCGCAGCG‑GGGTCTTTTT‑G‑CCCCCCCCGCTGCGGCCCCCCACCGCCACAAACTGACCTg < 2:599729/149‑1 (MQ=255) atcatTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCg > 2:860251/1‑151 (MQ=255) tccgggtgtC‑TCCTGGATTTCCGCCCGGGGGTGGGGCCCCC‑GCAACCACCTCG‑CTGGGGTTGGGCT‑TTC‑CCGGCCCGG‑CC‑AGCGGGCGCGGCA‑GGTTTTTTTC‑G‑CCACCCCCGGTGGGCCCCCCCACCGCCACAAACTGACCTGc < 2:1233351/140‑1 (MQ=255) tccgcgTTTCTTCCTAATTTCCAG‑CCGGGGGTGGGGCCCCC‑GCAAACCCCCCGCCGGGGGTG‑GGCG‑TTC‑CCAGCCCTG‑CC‑AGCGGGCGCAGC‑‑GGGTTCTTTTCC‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCg < 1:848368/145‑1 (MQ=255) cgTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGt > 1:339459/1‑151 (MQ=255) tttCTTCCTGATTTCCAG‑CCAGGGGTGTGGTCCCC‑GCTAAAACGCCGCCTGGGGTG‑GGCT‑TTT‑CCAGCCCTG‑CC‑GGCAGGCGCAGCA‑GGGTTTTTTG‑C‑CCCCCCCCGCTGCGCCCCACCACCGCCACAAACTGACCTGCCGGAata < 1:483015/144‑1 (MQ=255) gtCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTaa > 2:789890/1‑150 (MQ=255) tcttctTGATTTCCAG‑CGGGGGGTGGGGTCCCC‑CCAAACACCCCGCCGGGGTTG‑GGCT‑TTC‑CCACCCCGC‑CC‑AGCGGGCGCAGC‑‑GGGTTCTTTT‑GCCCCCCCCCGCGGCGCCCCCCCCCCGCCACAAACTGACCTGCCGGAATATGt < 2:1075870/147‑1 (MQ=255) ttcgtaattttCGG‑CCAGGGGTTGGGTGCCC‑TTAACCACTCCGCCGGC‑GTT‑GGCC‑TTTCCCGGCCCGG‑CC‑AGAAGGCGAAGAA‑GGGTTCTTTT‑C‑CCCCCCCCGTGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTa < 1:499284/138‑1 (MQ=255) ttCTTGAATTTCAC‑CCGGGGGTGGGGTCCCC‑GAAAACCCACCGCCTGCGGTG‑GCCT‑TTT‑CCACCCCTC‑CC‑GGCGGGCGCAGCA‑GGTTATTTTC‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGaa < 1:1258189/140‑1 (MQ=255) ctgaaaTTCCAC‑CCGGGGGGGTGGCCCCC‑GCAAACCCACCGCCGGGGTTG‑GGCT‑TTC‑CCAGCCCTG‑CC‑AGCAGGCGCGGCG‑GGGTATTTTT‑C‑CCCCCCCCGCTGCGCCCCACCACCGCCACAAACTGACCTGCCGGAatat < 1:769547/137‑1 (MQ=255) cctaattctCAG‑CCGGGGGTGTGGCCCCC‑CCAAACCCGCCGCCTG‑GGGT‑GGCC‑TTT‑CCCACCCCG‑CCAAGCAGGCGCAGCA‑GGGTCTTTTT‑C‑CCCCCCCCGATGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCa < 2:852230/142‑1 (MQ=255) ccTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATcc > 1:966108/1‑149 (MQ=255) cTGAATTTCAG‑CCAGC‑GTTTTGTGCCCGGCTACCCCAACCCCGCCGGTT‑GCGG‑TCA‑CGAGGCCAA‑CC‑AGCCGGC‑CAACAGGGGTCTTTTT‑G‑CCCCCCCGGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTaaa < 1:256008/145‑1 (MQ=255) aTTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGt > 2:188410/1‑151 (MQ=255) tttCAC‑CCAGGGGTGTGGTGCCC‑GCTAACACATCGCCTGGGGTT‑GGCT‑TTC‑CCAGCCCTG‑CC‑AGCGGGCGCAGCA‑GGGTTTTTTT‑G‑CCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGt < 1:1086737/150‑1 (MQ=255) ttCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTc > 1:621418/1‑151 (MQ=255) cag‑ccggcGGTGGGGGGCCC‑G‑TAACCACCCCCCCGGGGTT‑GGGGTTTT‑CCGGCCCGC‑CC‑GGCAGGCGCAGC‑‑GGGTTTTTTT‑GCCCCCCGCCGCGGCGGCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAg < 1:865070/151‑1 (MQ=255) cagcGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACTGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACg < 1:94501/151‑1 (MQ=255) gggggggggcgCCC‑GCAAACACCCCCCCTGGGGTG‑GGCT‑TTC‑CCGGCCCGC‑CC‑AGCGGGCGCGGAA‑GTTTTTTTTT‑C‑CCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGat < 2:1114200/141‑1 (MQ=255) ggTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGatat > 2:300428/1‑151 (MQ=255) ggTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGatat > 1:606542/1‑151 (MQ=255) ggTGGGGTCCCC‑GTAAACCCCCCGCCTGGGTTT‑GGTT‑TTC‑CCAGCCCTG‑CC‑AGGGGGCGCAGCA‑GGTTTTTTTT‑C‑CCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACg < 1:1178042/147‑1 (MQ=255) tgtgGTCCCC‑GCTACCACACCGCCTGGGTTT‑GGTT‑TTC‑CCAGCCCGC‑CC‑AGCAGGCGCAGCG‑GGTTTTTTTT‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATAtt < 1:1174164/150‑1 (MQ=255) ggccccc‑GATACCACACCGCCGGCGGTG‑GGCG‑TTC‑CCACCCCCC‑CC‑AGCGGGCGCAGCA‑GTGTTCTTTT‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTcc < 2:1123415/147‑1 (MQ=255) gCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCcgcg > 1:1129388/1‑151 (MQ=255) cc‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGt > 1:627894/1‑150 (MQ=255) cTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATg > 2:786649/1‑151 (MQ=255) tAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGt > 1:1126745/1‑151 (MQ=255) aaccacgccgcgtgggTT‑GGCC‑TTT‑CCCAACCCCCCC‑ACCAGGCGCAGC‑‑GGGTTCTTTTCC‑CCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTaa < 2:26508/134‑1 (MQ=255) accgcgccgcTGGGGGT‑GGCC‑TTT‑CCAAGCCTGCCC‑AGGGGGCGCAGCG‑GGTTACTTTG‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGt < 2:136513/141‑1 (MQ=255) acaTCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGc > 1:219852/1‑151 (MQ=255) acccccggggttt‑GGCT‑TTC‑CCGGCCCGG‑CC‑GGCGGGCGCAGGA‑GGGTATTTTT‑C‑CCCCCCCCGGTGGGGCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATg < 1:371128/133‑1 (MQ=255) cGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTAc > 1:671072/1‑151 (MQ=255) cGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTAc > 2:668587/1‑151 (MQ=255) cGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTAc > 1:875137/1‑151 (MQ=255) gCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACt > 2:120911/1‑151 (MQ=255) cTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGc > 1:926518/1‑151 (MQ=255) ggggTG‑GGCT‑TTC‑CCACCCCGG‑CC‑GGCGGGCGCAGCG‑GGTTTTTTTC‑C‑CCCCCCCCGTTGCGCCCCCCCGCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCAt < 2:663639/149‑1 (MQ=255) ggTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTg > 1:262694/1‑151 (MQ=255) ggCT‑TTC‑CCAGCCCTG‑CC‑AGCAGGCGCAGCA‑GGTTTCTTTC‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGc < 1:938761/150‑1 (MQ=255) gCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGca > 2:658567/1‑150 (MQ=255) g‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGcaac > 1:299262/1‑150 (MQ=255) ttt‑CCAGCCCCC‑CC‑AGCGGGCGCAGCG‑GGGTTCTTTT‑C‑CCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGcaa < 2:854437/148‑1 (MQ=255) tt‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAAt > 2:651694/1‑151 (MQ=255) cccaccccgccc‑AGCGGGCGCAGGG‑GGTTTTTTTT‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATg < 2:929515/141‑1 (MQ=255) cAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGc > 2:768445/1‑151 (MQ=255) ccaccccgcccggcgggCGCAGCA‑GGGTTTTTTT‑G‑CCCCCCCCGCGGCGGCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATgg < 2:780292/136‑1 (MQ=255) cc‑AGCAGGCGCAGCG‑GGTTTCTTTC‑C‑CCCCCCCCGCGGCCCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCt < 2:560489/150‑1 (MQ=255) cc‑AGCAGGCGCAGCA‑GGTTTCTTTC‑C‑CCCCCCCCGCGGCGGCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGccc < 2:1126731/149‑1 (MQ=255) agcagGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGt > 1:649962/1‑151 (MQ=255) cagGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTc > 1:1267407/1‑151 (MQ=255) agGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTc > 2:976294/1‑150 (MQ=255) ggCGCAGCG‑GGTTTTTTTT‑C‑CCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTc < 1:1264362/149‑1 (MQ=255) agca‑gGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACg > 2:862594/1‑149 (MQ=255) aCTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTc > 2:170884/1‑151 (MQ=255) cTTTC‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGCTCAGACGAGCAGTATTc > 2:216185/1‑150 (MQ=255) tccccccccccGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATa < 1:352460/141‑1 (MQ=255) ccccccccccccgcgcCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCg < 2:621416/139‑1 (MQ=255) ccccccccGCTGCGCCCCCCCCCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGt < 1:305224/145‑1 (MQ=255) ccccccccGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGt < 1:1118786/145‑1 (MQ=255) ccccccccGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATAc < 1:105955/142‑1 (MQ=255) cccccGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTgg < 1:521676/147‑1 (MQ=255) cgcggttGCGCCCCCCCTCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCAt < 1:1265311/136‑1 (MQ=255) tGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTc > 1:1244670/1‑151 (MQ=255) ccccccccCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCaaa < 2:219851/149‑1 (MQ=255) ccccccGCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCaaa < 1:941582/149‑1 (MQ=255) ccccccACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTc < 1:528612/146‑1 (MQ=255) ccccccACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCaaa < 1:897370/149‑1 (MQ=255) cccACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCAAATg > 2:88377/1‑151 (MQ=255) | AGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTTCAG‑CCAGCGGTGTGGTGCCC‑GCTAACACATCGCCTGCGGTT‑GGCG‑TTT‑CCAGACCTG‑CC‑AGCAGGCGCAGCA‑GGGTACTTTT‑G‑CCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGGCCTCCTTCAAATG > NC_000913/993770‑994064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |