Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,483,268	0	T	A	43.4%	88.3 / 40.6	76	L24F (TTA→TTT)	emrK	multidrug resistance efflux pump membrane fusion protein
Reads supporting (aligned to +/- strand):  ref base T (24/19);  new base A (0/33);  total (24/52)
Fisher's exact test for biased strand distribution p-value = 2.60e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGC  >  NC_000913/2483121‑2483417                                                                                                                                                    |                                                                                                                                                      cGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAataaataa                                                                                                                                                     <  2:59481/150‑1 (MQ=255) cGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAataaataa                                                                                                                                                     <  2:901920/150‑1 (MQ=255) cGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAataaataa                                                                                                                                                     <  2:919566/150‑1 (MQ=255)    aTCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAAc                                                                                                                                                  <  2:746636/150‑1 (MQ=255)    aTCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACt                                                                                                                                                 >  1:362452/1‑151 (MQ=255)      cTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTAc                                                                                                                                               >  2:233356/1‑151 (MQ=255)        ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTAcc                                                                                                                                              <  1:520597/150‑1 (MQ=255)            gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCaa                                                                                                                                         <  1:1103006/151‑1 (MQ=255)            gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCaa                                                                                                                                         <  2:1188714/151‑1 (MQ=255)            gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCa                                                                                                                                          <  1:1106195/150‑1 (MQ=255)            gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCa                                                                                                                                          <  2:846164/150‑1 (MQ=255)                  cGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATaa                                                                                                                                      >  2:453913/1‑148 (MQ=255)                       gTGACACTCCCGGAGACTTGTGAAAAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCAAATCCCATTGACAAAAAGGAAAAGACACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAg                                                                                                                               <  2:103942/150‑1 (MQ=255)                          acacTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTTTTCTAATTCCATTGACCAATAGGCATAGGCCCCTGAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTAtt                                                                                                                           <  1:1080894/151‑1 (MQ=255)                          acacTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTAtt                                                                                                                           >  1:383176/1‑151 (MQ=255)                           cacTCCCTGAGTCTTGTGCAAAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACAAATCATTTCTTCTAATCCAATTGCCAAAAAGGAAAAGGCACCTGAAAACGCAATAAATAAACCTACCGCCAATAAAGAAAAGTAt                                                                                                                            <  2:262267/149‑1 (MQ=255)                           cacTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTAttt                                                                                                                          >  2:529365/1‑151 (MQ=255)                            acTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTAtttt                                                                                                                         >  1:352743/1‑151 (MQ=255)                             cTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTttc                                                                                                                        >  2:510781/1‑151 (MQ=255)                                  tGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg                                                                                                                   >  2:28771/1‑151 (MQ=255)                                   gagaCTTGTGAAAAAATTGGATCTGCATTCCCCGTGAAATAGGGGTCTTTTGTACTAATCATTTCTTTTAATTCCATTGACAAATAGGCATAGGCCCCTGAAAACGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg                                                                                                                   <  1:327277/150‑1 (MQ=255)                                     ggcTTGTGCAGAAATGGGTTCTGCATACCCCGTGACATGGGCGTCATCTGTACTAACAATTTTTTCAATTTCCATGCACAAAAAGGCATGGGCCCCAAAAACCACAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg                                                                                                                   <  1:385186/146‑1 (MQ=255)                                        ttGTGCAAAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCAAATTCCATTGCCAAATAGGAATAGGCACCTAAAACCGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTa                                                                                                                <  2:421990/148‑1 (MQ=255)                                              aaaaaTTGGATCTGCTTTCCCCGTAACATAGGCGTAATTTGTAAAAATAATGTCTTCAAATCCCATTGCCAAATAGGAATAGGCACTTAAAAACGAAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttt                                                                                                       <  2:419442/149‑1 (MQ=255)                                                aaaTTGGATCTGCATCCCCCGTGACATAGGCGTCATTTATACTAATCATGTCTTCTAATACCATTGACAAAAAGGCATAGGCCCCTGAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGt                                                                                                          <  2:77665/146‑1 (MQ=255)                                                  aTTGGATCTGCATTCCCCGTGACATGGGCGTCATTTGTACAAATCATGTCTTAAAATCCCATTGACCAAAAGGCATAGCCCCCTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTa                                                                                                    <  2:196551/150‑1 (MQ=255)                                                     ggATCTGCATCCCCCGTGACATAGGCGTCATTTTTACTAATAATGTCTTCTAATTCCATTGACCAATAGGCATAGCCCCCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTAtt                                                                                                  <  1:978188/149‑1 (MQ=255)                                                       aTCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGa                                                                                               >  1:15124/1‑150 (MQ=255)                                                        tctcCATCCCCCGGAACGTGGGCGTCATCTGTACAAAACATGTTTTTTAATCCAATAGACAAATAGGCAAAGGCACCAGAAAACGAAAAAAAAAAAACAACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTAt                                                                                                   <  1:375260/145‑1 (MQ=255)                                                           gCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTa                                                                                           <  1:759589/150‑1 (MQ=255)                                                              ttCCCCGTGACATAGGCGTCATCTGTACTAATCATTTCTTCTAATCCCATTGACAAATAGGCATAGGCCCCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAtt                                                                                            <  2:694208/146‑1 (MQ=255)                                                              ttCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCt                                                                                       >  2:373600/1‑151 (MQ=255)                                                              ttCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAAt                                                                                         <  1:309204/149‑1 (MQ=255)                                                              ttCCCCGTGACATAGGAGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCt                                                                                       >  1:81025/1‑151 (MQ=255)                                                                 cccGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGtt                                                                                    >  1:15764/1‑151 (MQ=255)                                                                  cctgaaCAAAGGCGTCATTTTTACTAATCATATTTTTAAATACCATTGCCAAATAGGAAAAGGCTCTAAAAACCGCAATAAAAAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATG‑TTTTTATTTGAATTAATCTGTTc                                                                                   <  2:499245/145‑1 (MQ=255)                                                                    gtaaaaaaGGCGTCATCTGAACTAATCATGTTTTCAAATTCAATGGCCCAAAAGGAATAGGCACATTAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCa                                                                                 <  2:352741/144‑1 (MQ=255)                                                                     tGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCAc                                                                                >  2:684627/1‑151 (MQ=255)                                                                       aCATAGGGCTCATCTGTACAAATAATGTTTTCAAATACCATTGACAAATAGACATAGGCCCATAAAAACGCAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACta                                                                              <  2:191162/151‑1 (MQ=255)                                                                       aCATAGGCGTCATCTGTACTAATCATGTTTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt                                                                               <  1:1150156/150‑1 (MQ=255)                                                                           aGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatta                                                                           <  2:139391/150‑1 (MQ=255)                                                                           aGGCGGCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatta                                                                           <  1:526424/150‑1 (MQ=255)                                                                            ggCGTCATCTGTACTAATCATGTTTTCTAATTCCATTAACCAATAGGAATAGGCACCTGAAAACGCAATAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat                                                                          <  2:547824/150‑1 (MQ=255)                                                                            ggCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat                                                                          <  1:507124/150‑1 (MQ=255)                                                                             gCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtct                                                                        >  2:404716/1‑151 (MQ=255)                                                                              cGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctc                                                                       >  2:915204/1‑151 (MQ=255)                                                                                     tGTACTAATCATGTCTTCTAATCCCATTAACAAATAGGAATAGGCACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTCATTTGAATTAATCTGTTCCACTATTATCTCTCAttt                                                                 <  2:1159164/150‑1 (MQ=255)                                                                                      gTACTAATCATGTCTTCTAATCCCATTGACAAATAGGCATAGGCACCTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAttt                                                                 <  1:738060/149‑1 (MQ=255)                                                                                       tACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTtct                                                               >  2:132766/1‑150 (MQ=255)                                                                                           aaTCATGTCTTCAAATCCCATTAACCAAAAGGCATAGGCACCTGAAAACGAAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAg                                                          <  2:974382/151‑1 (MQ=255)                                                                                                tGTCTTCTAATACCATCCACAAATAAGCAAAGGCCGTTAAAACCACAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGAt                                                        <  2:153124/148‑1 (MQ=255)                                                                                                  tcttctAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAt                                                   >  2:677536/1‑151 (MQ=255)                                                                                                    ttctAATTCCATTGCCCAATAGGCATAGGCACCTAAAAACGAAAAAAAAAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAtt                                                  <  2:1001509/150‑1 (MQ=255)                                                                                                          tcccATTGACCAATAGGCATAGGCCCCTAAAAACGAAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaa                                            <  2:174333/148‑1 (MQ=255)                                                                                                           tCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaatt                                          >  1:417989/1‑151 (MQ=255)                                                                                                            ccATTGACCAATAGGCATAGGCACCTAAAAACGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaatt                                          <  1:570223/150‑1 (MQ=255)                                                                                                             cattaccaaaTAGGAATAGCCCCCGAAAAACCAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattga                                        <  1:1249865/143‑1 (MQ=255)                                                                                                             cATTGCCAAAAAGGCAGAGGCCCCTAAAACCGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaat                                           <  2:999782/148‑1 (MQ=255)                                                                                                             cATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg                                         >  1:238568/1‑150 (MQ=255)                                                                                                              aTTGCCCAATAGGCATAGGCACCTAAAAACGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg                                         <  1:1258017/149‑1 (MQ=255)                                                                                                              aTTGACCAATAGGAATAGGCACCTGAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg                                         <  2:409343/149‑1 (MQ=255)                                                                                                               ttGCCCAATAGGCATAGGCACCTAAAAACGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattgaa                                       <  2:15124/150‑1 (MQ=255)                                                                                                               ttGACAAATGGACATAGGCACCAAAAAACGCAAAAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattgaa                                       <  1:776213/150‑1 (MQ=255)                                                                                                                tgcccAAAAGGAAAAGGCGCCGGAAAGCACAATAAATAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaat                                           <  1:111823/142‑1 (MQ=255)                                                                                                                 gACAAAAAGGAATAGGCCCCTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATtgaatg                                     <  2:540371/150‑1 (MQ=255)                                                                                                                 acccAATAGCAATGGGCACTTGAAACCGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATtgaatg                                     <  1:416451/148‑1 (MQ=255)                                                                                                                  aCCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATtgaatga                                    >  1:1101303/1‑150 (MQ=255)                                                                                                                     aataggaacggcccccTAAAAACGCAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAag                                <  1:25061/137‑1 (MQ=255)                                                                                                                     aaTAGGCAAAGCCCCCTGAAACCGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattga                                        <  2:763772/143‑1 (MQ=255)                                                                                                                        aggcataggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGc                             >  2:8931/1‑151 (MQ=255)                                                                                                                               ggcaCCAGAAAACGAAATAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcatt                          <  1:518420/147‑1 (MQ=255)                                                                                                                                 caCCTAAAAACGCAATAAAAAAAACTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattcat                       <  2:383174/148‑1 (MQ=255)                                                                                                                                   ccTGAAAACGAAAAAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc                  <  1:512620/151‑1 (MQ=255)                                                                                                                                    cTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc                  >  1:458080/1‑150 (MQ=255)                                                                                                                                      gAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCat                >  2:489325/1‑150 (MQ=255)                                                                                                                                       aaacCGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCa                 <  1:916027/148‑1 (MQ=255)                                                                                                                                       aaaaCGAAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttctt                   <  1:926027/146‑1 (MQ=255)                                                                                                                                       aaaaCGAAAAAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttctt                   <  2:940413/146‑1 (MQ=255)                                                                                                                                        aaaCGCAATAAATAAAACTACCGCCAATAAAGAAAAGAATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATc             >  2:141719/1‑151 (MQ=255)                                                                                                                                                aaaaaaaaCCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAg     <  1:50035/150‑1 (MQ=255)                                                                                                                                                 aaataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAg     >  1:1072957/1‑150 (MQ=255)                                                                                                                                                 aaataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGt    <  1:1057764/151‑1 (MQ=255)                                                                                                                                                    taaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc  >  2:1115201/1‑150 (MQ=255)                                                                                                                                                    taaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc  >  1:484695/1‑150 (MQ=255)                                                                                                                                                    taaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc  >  1:177723/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGC  >  NC_000913/2483121‑2483417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑