Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,743,880 IS1 (–) +9 bp coding (424‑432/1374 nt) mdtK → multidrug efflux system transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)65 (0.800) 58/298 0.7 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 1743880 = 0 (0.000)coding (424/1374 nt) mdtK multidrug efflux system transporter
* ? NC_000913 = 17438880 (0.000)70 (0.860) 58/298 0.7 100% coding (432/1374 nt) mdtK multidrug efflux system transporter
?NC_000913 1978503 = NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 131 total aligned reads displayed.

TTCTGGCTGGCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTT  >  NC_000913/1743730‑1744029
                                                                                                                                                      |                                                                                                                                                     
cagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc                                                                                                                                                       >  1:966526‑M2/151‑151 (MQ=255)
cagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc                                                                                                                                                       >  1:823988‑M2/151‑151 (MQ=255)
 tCTGGCTGGCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCt                                                                                                                                                      >  1:480893/1‑151 (MQ=255)
    ggctggcAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGt                                                                                                                                                    <  2:146333/150‑1 (MQ=255)
     atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGttc                                                                                                                                                  >  2:1072515‑M2/146‑151 (MQ=255)
      tagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGttct                                                                                                                                                 >  1:61594‑M2/145‑151 (MQ=255)
      ctggcAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGttct                                                                                                                                                 >  2:1248346/1‑151 (MQ=255)
      ctggcAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGttct                                                                                                                                                 >  2:668948/1‑151 (MQ=255)
       tggcAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGttctt                                                                                                                                                >  2:135726/1‑151 (MQ=255)
       agcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGttctt                                                                                                                                                <  2:555548‑M2/8‑1 (MQ=255)
       agcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGttct                                                                                                                                                 <  2:231454‑M2/7‑1 (MQ=255)
         gCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCg                                                                                                                                              <  2:896981‑M1/151‑2 (MQ=255)
          cAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCgg                                                                                                                                             <  1:308625‑M1/151‑3 (MQ=255)
           aGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggt                                                                                                                                            <  2:598613‑M1/151‑4 (MQ=255)
            ggTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggt                                                                                                                                            >  1:737368‑M1/1‑147 (MQ=255)
              ttttGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaat                                                                                                                                         >  1:859928‑M1/1‑145 (MQ=255)
                     gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTa                                                                                                                                  <  2:570326‑M2/22‑1 (MQ=255)
                      ccGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactcca                                                                                                                                  <  2:614700‑M1/150‑14 (MQ=255)
                       cGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaac                                                                                                                                <  1:1149776‑M1/151‑16 (MQ=255)
                        gTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaact                                                                                                                               >  1:571860‑M1/1‑135 (MQ=255)
                        gTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaact                                                                                                                               <  2:1166679‑M1/151‑17 (MQ=255)
                          gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAAcc                                                                                                                               >  2:599899‑M2/125‑149 (MQ=255)
                            ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAgtg                                                                                                                           >  1:199882‑M2/123‑151 (MQ=255)
                             cATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttat                                                                                                                            <  2:529293‑M1/149‑20 (MQ=255)
                                 ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGa                                                                                                                        >  2:505029‑M2/118‑149 (MQ=255)
                                 ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAg                                                                                                                      <  2:96859‑M2/34‑1 (MQ=255)
                                 aTGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgat                                                                                                                        >  2:836033‑M1/1‑126 (MQ=255)
                                    cTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgt                                                                                                                   >  1:184538‑M1/1‑123 (MQ=255)
                                       gTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgtttt                                                                                                                <  1:399991‑M1/151‑32 (MQ=255)
                                        gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGc                                                                                                               <  1:542466‑M2/41‑1 (MQ=255)
                                         gCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttat                                                                                                              <  2:120466‑M1/151‑34 (MQ=255)
                                               gAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttc                                                                                                          >  1:21133‑M1/1‑112 (MQ=255)
                                               cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAAcc                                                                                                        <  1:967831‑M2/48‑1 (MQ=255)
                                                aaTGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                       <  2:1008040‑M1/151‑41 (MQ=255)
                                                      ggTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                      >  2:649777‑M1/1‑105 (MQ=255)
                                                          aCATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                              <  2:901584‑M1/150‑50 (MQ=255)
                                                          aCATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                              >  1:659845‑M1/1‑101 (MQ=255)
                                                             aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGt                                                                                          <  2:762723‑M2/62‑1 (MQ=255)
                                                                  cGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                     <  2:951948‑M1/151‑59 (MQ=255)
                                                                   gCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                    >  1:1201164‑M1/1‑92 (MQ=255)
                                                                   agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATggg                                                                                    >  1:696972‑M2/84‑151 (MQ=255)
                                                                     tCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                                   >  1:860892‑M1/1‑90 (MQ=255)
                                                                         agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTAt                                                                              <  1:473931‑M2/74‑1 (MQ=255)
                                                                           gAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                            >  1:450058‑M1/1‑84 (MQ=255)
                                                                             gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCg                                                                            <  2:1208520‑M2/76‑1 (MQ=255)
                                                                             gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCg                                                                            <  2:623930‑M2/76‑1 (MQ=255)
                                                                               aCATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                         >  1:1132737‑M1/1‑80 (MQ=255)
                                                                                cATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       <  2:677975‑M1/151‑73 (MQ=255)
                                                                                 aTCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                      <  2:151544‑M1/151‑74 (MQ=255)
                                                                                    gATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                   >  2:108223‑M1/1‑75 (MQ=255)
                                                                                     cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGt                                                                  >  2:857010‑M2/66‑151 (MQ=255)
                                                                                       ccGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                                 <  1:330141‑M1/150‑79 (MQ=255)
                                                                                        aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGa                                                                >  2:824713‑M2/63‑150 (MQ=255)
                                                                                         agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGaa                                                               >  2:541380‑M2/62‑150 (MQ=255)
                                                                                         agcTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                               >  1:164903‑M1/2‑70 (MQ=255)
                                                                                                ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCg                                                        <  1:1161343‑M2/96‑1 (MQ=255)
                                                                                                gCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                       <  1:1210766‑M1/151‑89 (MQ=255)
                                                                                                  agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTg                                                     <  1:1046367‑M2/99‑1 (MQ=255)
                                                                                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACt                                                 <  2:905344‑M2/103‑1 (MQ=255)
                                                                                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACt                                                 >  1:655966‑M2/49‑151 (MQ=255)
                                                                                                       aaGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                <  1:539803‑M1/151‑96 (MQ=255)
                                                                                                        tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACtat                                               >  1:1073571‑M2/47‑151 (MQ=255)
                                                                                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACtat                                               >  2:195987‑M2/46‑150 (MQ=255)
                                                                                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACta                                                <  1:552383‑M2/104‑1 (MQ=255)
                                                                                                           cGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                            >  1:880422‑M1/1‑52 (MQ=255)
                                                                                                             aacaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCtt                                          >  1:902024‑M2/42‑151 (MQ=255)
                                                                                                              gggTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                          <  1:297804‑M1/150‑102 (MQ=255)
                                                                                                              acaccatcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCttt                                         <  2:744375‑M2/111‑1 (MQ=255)
                                                                                                               ggTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                        <  2:293904‑M1/151‑104 (MQ=255)
                                                                                                                 ttATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                                       <  1:902475‑M1/150‑105 (MQ=255)
                                                                                                                 ttATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                        >  1:1017604‑M1/1‑46 (MQ=255)
                                                                                                                    tcatacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTttatttat                                   >  1:612426‑M2/35‑151 (MQ=255)
                                                                                                                    tCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccg                                   >  2:1120894‑M1/1‑43 (MQ=255)
                                                                                                                     catacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCTGGTGAACTATATCTttatttat                                   <  1:121258‑M2/117‑1 (MQ=255)
                                                                                                                     catacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTttatttat                                   <  2:319505‑M2/117‑1 (MQ=255)
                                                                                                                     catacactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTttatttat                                   <  2:22670‑M2/117‑1 (MQ=255)
                                                                                                                        cgtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                               <  2:970660‑M1/151‑113 (MQ=255)
                                                                                                                        acactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGt                                <  1:893983‑M2/120‑1 (MQ=255)
                                                                                                                         gtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                              <  1:381506‑M1/151‑114 (MQ=255)
                                                                                                                         gtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                              <  2:340230‑M1/151‑114 (MQ=255)
                                                                                                                         gtgcgtTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                               >  2:452111‑M1/1‑38 (MQ=255)
                                                                                                                         cactaaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCa                              <  2:627189‑M2/122‑1 (MQ=255)
                                                                                                                            taaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGCGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCAttt                           >  2:336616‑M2/27‑151 (MQ=255)
                                                                                                                             aaatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCAttt                           <  2:673316‑M2/125‑1 (MQ=255)
                                                                                                                              aatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCg                         >  2:293219‑M2/25‑151 (MQ=255)
                                                                                                                              aatcagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCg                         <  1:411252‑M2/127‑1 (MQ=255)
                                                                                                                               tgttgtGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                         <  2:451945‑M1/150‑119 (MQ=255)
                                                                                                                                gttgtGGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                        <  2:592547‑M1/150‑120 (MQ=255)
                                                                                                                                 cagtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGt                       >  2:1205465‑M2/22‑150 (MQ=255)
                                                                                                                                  agtaagttggcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTAt                     <  1:950977‑M2/131‑1 (MQ=255)
                                                                                                                                   gtgGGGCGCGCCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                    <  1:1073121‑M1/151‑124 (MQ=255)
                                                                                                                                           gcagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACAAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGc             >  1:788212‑M2/12‑150 (MQ=255)
                                                                                                                                            gcCGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc             >  1:90194‑M1/1‑19 (MQ=255)
                                                                                                                                            cagcatcaccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTc           <  2:1011839‑M2/141‑1 (MQ=255)
                                                                                                                                             ccGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg          >  2:801350‑M1/1‑18 (MQ=255)
                                                                                                                                             ccGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg          >  1:543402‑M1/1‑18 (MQ=255)
                                                                                                                                              cGGGATATCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt         >  1:178136‑M1/1‑17 (MQ=255)
                                                                                                                                                  caccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGc     <  1:243452‑M2/147‑1 (MQ=255)
                                                                                                                                                  caccCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGc     >  1:171231‑M2/5‑151 (MQ=255)
                                                                                                                                                     tCTGTTCTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg  >  2:397175‑M1/1‑10 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TTCTGGCTGGCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTT  >  NC_000913/1743730‑1744029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.