Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,196 IS5 (+) +4 bp intergenic (‑274/‑328) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293196 =0 (0.000)77 (0.970) 59/298 0.5 100% intergenic (‑274/‑331) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1300693 NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 12931990 (0.000)66 (0.830) 58/298 0.5 100% intergenic (‑277/‑328) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 1299499 = NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 139 total aligned reads displayed.

CTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGC  >  NC_000913/1293051‑1293347
                                                                                                                                                    |                                                                                                                                                    
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTtagcc                                                                                                                                                    >  2:1071772‑M1/146‑149 (MQ=255)
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGtt                                                                                                                                                    >  2:944494‑M1/146‑151 (MQ=255)
    tCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaag                                                                                                                                                 <  1:119249‑M1/150‑6 (MQ=255)
    ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTtgt                                                                                                                                                  >  1:368845‑M1/142‑149 (MQ=255)
      ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGttt                                                                                                                                              <  2:655140‑M1/12‑1 (MQ=255)
        ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTAc                                                                                                                                            >  1:860181‑M1/138‑151 (MQ=255)
        aaaaTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgc                                                                                                                                             <  1:149872‑M1/150‑10 (MQ=255)
         aacttAGCTAGAAAACACGCGGCCTATCGCCCTACTTACACCGATGATTTCGCAGCACATGAGGTTAAAACGTCGTGTTTCGTGGCACATTTTATGGGGCGATTATCGTAGGCTGACGACCTTTAAGACTTCTGTATTAgggaagatgcg                                                                                                                                            >  2:519582/4‑140 (MQ=255)
            ttAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaac                                                                                                                                         >  1:399466‑M1/1‑137 (MQ=255)
            cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttagccgaagtgctcgcc                                                                                                                                        <  2:801507‑M1/18‑15 (MQ=255)
             tAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaaca                                                                                                                                        >  1:13338‑M1/1‑136 (MQ=255)
             gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttagccgaagtgctcgcc                                                                                                                                        <  1:1033528‑M1/18‑15 (MQ=255)
               gCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagt                                                                                                                                     >  1:739201‑M1/1‑134 (MQ=255)
                 taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAAtt                                                                                                                                     >  1:348075‑M1/129‑149 (MQ=255)
                   aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCt                                                                                                                                 <  1:151146‑M1/25‑1 (MQ=255)
                   aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCt                                                                                                                                 <  1:659881‑M1/25‑1 (MQ=255)
                     tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTAt                                                                                                                               <  2:1222067‑M1/27‑1 (MQ=255)
                     aaaGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGCTTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctg                                                                                                                                >  2:722309‑M1/1‑128 (MQ=255)
                      ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTAtt                                                                                                                              >  2:1142211‑M1/124‑151 (MQ=255)
                         gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTa                                                                                                                             <  1:130159‑M1/29‑1 (MQ=255)
                         aCGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatg                                                                                                                           <  2:872165‑M1/151‑28 (MQ=255)
                             ggCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagat                                                                                                                       <  1:603752‑M1/151‑32 (MQ=255)
                             aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGa                                                                                                                        <  2:57046‑M1/34‑1 (MQ=255)
                              gCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatc                                                                                                                      <  1:745795‑M1/151‑33 (MQ=255)
                               cATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatc                                                                                                                      >  2:1231051‑M1/1‑118 (MQ=255)
                               acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAatg                                                                                                                     <  2:1038241‑M1/37‑1 (MQ=255)
                               acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAatg                                                                                                                     >  2:1184895‑M1/115‑151 (MQ=255)
                                 tataGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                                   >  1:38228‑M1/1‑116 (MQ=255)
                                  gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAatgatg                                                                                                                  <  1:1114982‑M1/40‑1 (MQ=255)
                                    ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAAtgatga                                                                                                                 <  1:289916‑M1/41‑1 (MQ=255)
                                      aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAAtgatga                                                                                                                 >  1:449488‑M1/108‑148 (MQ=255)
                                      aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGaaa                                                                                                               <  2:57739‑M1/43‑1 (MQ=255)
                                            ttACCCCCATGATTTCGCAGCACGTGAAGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCCGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                            <  2:890372‑M1/147‑43 (MQ=255)
                                             tACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                        <  2:323441‑M1/150‑47 (MQ=255)
                                              acacCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                       >  1:1009425‑M1/1‑103 (MQ=255)
                                               gattcaagggatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcgccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGaa                                                                                                        >  2:501763‑M1/99‑148 (MQ=255)
                                                    aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGc                                                                                                 >  2:610848‑M1/94‑150 (MQ=255)
                                                     aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCa                                                                                                <  1:619381‑M1/58‑1 (MQ=255)
                                                      gatTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                                                                              <  1:176591‑M1/151‑57 (MQ=255)
                                                        catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATaa                                                                                            >  1:1087956‑M1/90‑151 (MQ=255)
                                                        catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATaa                                                                                            >  1:66840‑M1/90‑151 (MQ=255)
                                                         atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATa                                                                                             <  1:524182‑M1/61‑1 (MQ=255)
                                                         atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAag                                                                                           >  1:697609‑M1/89‑151 (MQ=255)
                                                         atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAag                                                                                           >  1:910535‑M1/89‑151 (MQ=255)
                                                          tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATa                                                                                             <  1:947014‑M1/61‑1 (MQ=255)
                                                           ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAag                                                                                           <  2:899382‑M1/63‑1 (MQ=255)
                                                             cagcaCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                                                                       <  1:934031‑M1/151‑64 (MQ=255)
                                                               gcaCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                     <  2:1115718‑M1/151‑66 (MQ=255)
                                                                    aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACtt                                                                                <  1:835184‑M1/74‑1 (MQ=255)
                                                                     aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTa                                                                               >  2:676409‑M1/77‑151 (MQ=255)
                                                                      aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACtt                                                                                <  2:361022‑M1/74‑1 (MQ=255)
                                                                          tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTAtt                                                                          <  1:627149‑M1/80‑1 (MQ=255)
                                                                           aaaaCTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                         <  1:1180577‑M1/151‑78 (MQ=255)
                                                                           aaaaCTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                          <  1:973330‑M1/150‑77 (MQ=255)
                                                                            ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTg                                                                         >  1:700006‑M1/70‑150 (MQ=255)
                                                                                caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACt                                                                     >  2:290198‑M1/66‑150 (MQ=255)
                                                                                  ccTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtcccttatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcagctta                                                                  <  2:1193698‑M1/151‑85 (MQ=255)
                                                                                  ccTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                  <  1:510825‑M1/151‑85 (MQ=255)
                                                                                    catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTAtctc                                                                <  1:1015528‑M1/90‑1 (MQ=255)
                                                                                         cATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                           <  1:1215903‑M1/151‑92 (MQ=255)
                                                                                         cATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                           >  2:746971‑M1/1‑60 (MQ=255)
                                                                                         cATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                            <  2:82017‑M1/150‑91 (MQ=255)
                                                                                           tGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                         >  1:663551‑M1/1‑58 (MQ=255)
                                                                                              cacaTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                                       <  2:1047042‑M1/150‑96 (MQ=255)
                                                                                                aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAAc                                                    <  1:558937‑M1/102‑1 (MQ=255)
                                                                                                 aTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                   <  1:1075907‑M1/151‑100 (MQ=255)
                                                                                                 aTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                   >  2:730211‑M1/1‑52 (MQ=255)
                                                                                                 aTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                   >  2:23716‑M1/1‑52 (MQ=255)
                                                                                                  ttttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                   >  2:516561‑M1/1‑51 (MQ=255)
                                                                                                    ttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                                >  2:1153133‑M1/1‑49 (MQ=255)
                                                                                                    ttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                                >  1:470702‑M1/1‑49 (MQ=255)
                                                                                                     actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAgg                                               >  1:608183‑M1/45‑151 (MQ=255)
                                                                                                       tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGc                                             <  1:632080‑M1/109‑1 (MQ=255)
                                                                                                        gagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCt                                            <  2:1082712‑M1/110‑1 (MQ=255)
                                                                                                            agaTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                        >  1:1072599‑M1/1‑41 (MQ=255)
                                                                                                             gaTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta                                       <  2:291455‑M1/151‑112 (MQ=255)
                                                                                                             agccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTAc                                       <  1:750957‑M1/115‑1 (MQ=255)
                                                                                                              aTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                      <  2:865598‑M1/151‑113 (MQ=255)
                                                                                                               ccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACtt                                     >  2:716936‑M1/35‑151 (MQ=255)
                                                                                                                 gagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTgc                                   >  2:771602‑M1/33‑151 (MQ=255)
                                                                                                                 aTCGTAGGCTGACGGTCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactttccttcgccgacagtgaattcagcagtaagc                                    <  2:439223‑M1/150‑115 (MQ=255)
                                                                                                                 aTCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                                   <  2:1094203‑M1/151‑116 (MQ=255)
                                                                                                                   gaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTgcgc                                 <  1:355540‑M1/121‑1 (MQ=255)
                                                                                                                    aagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCa                                >  2:1085533‑M1/30‑151 (MQ=255)
                                                                                                                     tAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcataagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                               >  2:611095‑M1/1‑32 (MQ=255)
                                                                                                                     agaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCaa                               >  2:750944‑M1/29‑151 (MQ=255)
                                                                                                                      aGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                              <  1:259657‑M1/151‑121 (MQ=255)
                                                                                                                        gCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                              >  2:855462‑M1/1‑29 (MQ=255)
                                                                                                                         cTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                              >  2:1154423‑M1/1‑28 (MQ=255)
                                                                                                                           tccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGt                          >  1:1123777‑M1/23‑150 (MQ=255)
                                                                                                                             cgacCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag                       <  1:980627‑M1/151‑128 (MQ=255)
                                                                                                                             cgacCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                         >  2:608993‑M1/1‑24 (MQ=255)
                                                                                                                             cgacCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                         >  2:325537‑M1/1‑24 (MQ=255)
                                                                                                                              ccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTaa                       <  2:947658‑M1/131‑1 (MQ=255)
                                                                                                                                ccTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                    <  1:872340‑M1/151‑131 (MQ=255)
                                                                                                                                ccTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                     >  2:1245193‑M1/1‑21 (MQ=255)
                                                                                                                                     tacgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATtgt                >  2:557911‑M1/13‑150 (MQ=255)
                                                                                                                                        gcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAAt            >  1:201971‑M1/10‑151 (MQ=255)
                                                                                                                                            cttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGtt        <  1:213091‑M1/146‑1 (MQ=255)
                                                                                                                                             ttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGtt        <  1:249536‑M1/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGC  >  NC_000913/1293051‑1293347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.