| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,001,918 | 0 | A | C | 44.3% | 97.3 / 19.7 | 61 | intergenic (‑129/+192) | fliA/fliC | RNA polymerase, sigma 28 (sigma F) factor/flagellar filament structural protein (flagellin) |
| Reads supporting (aligned to +/- strand): ref base A (29/5); new base C (0/27); total (29/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.02e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGC > NC_000913/2001769‑2002066 | aGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAAc > 2:679450/1‑151 (MQ=255) gCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAAcc < 2:1013116/151‑1 (MQ=255) ggTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAAcccc > 1:383473/1‑151 (MQ=255) taGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCccgccg > 1:1056767/1‑151 (MQ=255) gAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCg > 1:593707/1‑151 (MQ=255) cACGATAAACAGCCCTGCGTTATAGGAGTTATCGGCATGATTATCCGTTTCTGCAGGTTTTTTAACCGGACGATTAGGGGGTAAAATGAGGGGTTATTG‑GGGGG‑TAACAGGT‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGaa < 1:27149/151‑1 (MQ=255) cACGAAAACCAGCCTTGGTTTATAGGTGTTATCGGCATGATTATCCGTTTTTGCAGGTTTTTAAATCGGACGATTAGTGGGTAAAAGGGGGGGTTTTTT‑GGGGG‑TGAAAGGT‑AAATTCCAGGCAGAAAAAACCCCCGCCGGTGGCGGGGaa < 2:366865/151‑1 (MQ=255) aaaaaCAGCCCTGCTTTATATGAGTTATCGGCATGTTTATCCGTTTCTGCGGGGTTTTAAAGCGGACGATTAGTGGGAAAAAGGGGGGTTTATTG‑GGGGG‑TTAAAGGA‑AAATCCCAGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCAc < 1:662296/149‑1 (MQ=255) aTAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGT‑AAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACg > 2:620188/1‑151 (MQ=255) aaCAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGtt > 1:776543/1‑151 (MQ=255) accgCCCTGTTTTATAAGGTTTATCGGCATAATTATCCGTTTAGGCAGGTTTTTTAATGGGACAATAAGGGGGTGAAAGGAGGGTTTATTG‑GGGGT‑TTACAGGA‑AATCTCCAGCAAAAAAAAACCCCCGCCGGTGGCGGGGAAg < 1:687780/141‑1 (MQ=255) aCAGCCCTGCTTTATATGAGTTAGCGGCATGATTATCCGTTTCTGCGGGTTTTTAAACCGGACGATTGGGGGGTAAAAGGGGGGTTTTTTG‑GGGGG‑TTACAGAA‑AAATCCCAGGAAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGtt < 1:1020642/150‑1 (MQ=255) cccTGCTTTATATGAGTTATCGGCATGATTATCCGTTTCTGCGGGTTTTTTAATCGGACGATTAGGGGGTAAAATGAGGGTTTATTG‑GGGGT‑TTACAGTT‑AAATTCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGa < 2:891235/151‑1 (MQ=255) cTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGAc > 2:572170/1‑150 (MQ=255) tttATATGGTTAATGGGAATGTTTATCCGTTTCGGGAGGTTTTTAAAGCGGAGTTTTAGTGGTTAAAATGGGGGTTTATTG‑GGGGT‑TTACAGTA‑AAATCCCGGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAAt < 2:699408/149‑1 (MQ=255) ttATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGTTTAGTGGGTGAAATGGGGGTTTTTTT‑GGGGG‑TTACGGGT‑AAATTCCAGGCAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAAtt < 2:890071/150‑1 (MQ=255) tataTGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTg > 2:167909/1‑150 (MQ=255) gatttATGGGCATGATTATCCGTTTCTGCAGGGTTTTTAATGGGAGGATTAGTGGGTAAAAGGGGGGGTTATTG‑GGGGG‑TAAAAGGA‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCtt < 1:347122/147‑1 (MQ=255) ttATCGGCATGATTATCCGTTTCTGCAGGTTTTTAAATCGGACGATTAGGGGGTAAAAGGGGGGGTTATTG‑GGGGG‑TTACAGGA‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTgcg < 1:20301/144‑1 (MQ=255) ggCATGATTATCCTTTTCTGCAGGTTTTTTAATCGGACGATTGGGGGGAAAAAGGGGGGGTTATTG‑GGGGG‑TAACAGGA‑AAATTCCAGGAAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTg < 2:963076/149‑1 (MQ=255) gCAGGATTATCCGTTTCTGCGGGTTTTTTAAGCGGACGATGAGTGGGTGAAATGAGGGTTTTTTT‑GGGGG‑TTACAGAT‑AAATTCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGcc < 1:617565/150‑1 (MQ=255) cATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCgg > 1:420250/1‑151 (MQ=255) gATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATg > 1:228404/1‑151 (MQ=255) aTTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgc > 2:1108746/1‑151 (MQ=255) tATCCGTTTCTGCAGGGTTTTTAATCGGACGATTGGGGGGTGAAATGAGGGTTTTTTG‑GGGGG‑TTACAGGT‑AAATTCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcg < 1:325642/150‑1 (MQ=255) tATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAAgcgg > 1:1146230/1‑151 (MQ=255) ccGTTTCGGAGGGTTTTTTAATCGGACGATGAGGGGGAAAAAGGA‑GGGTTTTTT‑GGGGG‑TTAAAAGTAAAATCCCAGAAAAAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGAt < 1:1136189/144‑1 (MQ=255) cGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcggcg > 1:91636/1‑149 (MQ=255) tttCTGCGGGTTTTTTAATCGGACGATTAGTGGGTGAAATGGGGGTTTTTTT‑GGGGG‑TTACAGGT‑AATTTCAAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTaa < 1:13598/150‑1 (MQ=255) tttCTGCAGGTTTTTTAATCGGACGATTGGGGGGTAAAATGGGGGTTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATgcgg < 2:876993/145‑1 (MQ=255) ttcggtgggttttttAAGCGGACTATTAGTGGGAAAAAGGGGGGTTTTTTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAAAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTaaa < 1:936260/140‑1 (MQ=255) tCTGCGGGTTTTTTAATCGGACTATTAGTGGGTGAAAGGGGGGTTTTTTT‑GGGGG‑TTACAGTA‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAAc < 2:650968/150‑1 (MQ=255) gggTTTTTAATGGGACGATTAGGGGGTGAAATGGGGGGTTATTT‑GGGGG‑TTACGGGA‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACg < 2:184019/145‑1 (MQ=255) gttttttAATCGGACGATTAGGGGGTGAAATGGGGGGTTTTTG‑GGGGG‑TTACAGTT‑AAATTCCAGGAAAAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATc < 2:808479/149‑1 (MQ=255) gTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATcc > 1:313971/1‑151 (MQ=255) ttttAATGGGCGGATTAGGGGGTAAAAGGAGGTTTTATTG‑GGGGG‑TTAAAGGT‑AAATCCCAGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCg < 2:671938/150‑1 (MQ=37) tttAATCGGACGATTAGGGGGT‑AAAAGGGGGGTTTTTT‑GGGGGTTTACGGGT‑AATTCCCAGGCAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCgg < 2:542709/150‑1 (MQ=37) aggATTGGGGGGTAAAATGGGGGTTTATTG‑GGGGG‑TTAAAGGT‑AATTCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa < 1:115843/148‑1 (MQ=25) aCGATTAGTGGGTAAAATGGGGGTTTATTT‑GGGGT‑TTACAGGA‑AAATCCCGGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa < 2:689257/150‑1 (MQ=37) cGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAt > 1:361614/1‑151 (MQ=255) ttAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAAtgtg > 1:1123641/1‑151 (MQ=255) gggggTAAAATG‑GGGGTTTTTT‑GGGGGTTTACAGGT‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc < 1:870164/147‑1 (MQ=37) gggTAAAATGGGGGGTTATTG‑GGGGG‑TTAAAGGA‑AAATCCCAGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGc < 1:227681/147‑1 (MQ=37) aaagggggtgttttt‑GGGGTTTTACAGGT‑AAATCCCAGACAGAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAAt < 1:984608/139‑1 (MQ=25) aaaggggggTTTTTTGGGGGG‑TTAAAGTA‑AAATCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCa < 1:832586/144‑1 (MQ=25) gggggtTTATTT‑GGGGT‑TTACAGGA‑AAATTCCAGGCAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATaaa < 2:585191/148‑1 (MQ=37) gAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAAt > 2:219297/1‑151 (MQ=255) gggtTTATTG‑GGGGG‑TTACAGGA‑AAATTCCAGAAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTg < 1:974368/151‑1 (MQ=37) ggTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGc > 2:112353/1‑150 (MQ=255) tATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAtt > 2:363039/1‑151 (MQ=255) tATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAAtt > 2:1032061/1‑151 (MQ=255) gggg‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACtt > 2:305836/1‑151 (MQ=255) gggg‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACtt > 2:1041776/1‑151 (MQ=255) ggT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCt > 1:320492/1‑150 (MQ=255) ggT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTg > 2:291792/1‑151 (MQ=255) aaTCCCAGGAAAAAAAAACCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATaa < 1:809183/151‑1 (MQ=255) ccAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgc > 1:963792/1‑151 (MQ=255) cAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgc > 2:866043/1‑150 (MQ=255) ggaaaaaaaaacCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgca < 1:963800/144‑1 (MQ=255) cAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc > 2:104222/1‑151 (MQ=255) cAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc > 1:699339/1‑151 (MQ=255) aaaaaaaacCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc < 2:1070179/148‑1 (MQ=255) aGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc > 2:1168781/1‑150 (MQ=255) aaaaaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCAt < 2:383474/150‑1 (MQ=255) aaaaaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATc > 1:348908/1‑149 (MQ=255) aaacCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAgg < 1:519721/151‑1 (MQ=255) aaCCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGc > 2:98717/1‑150 (MQ=255) | AGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGGACGATTAGTGGGTGAAATGAGGGGTTATTT‑GGGGG‑TTACAGGT‑AAATTCCAGGCAGAAAAAAACCCCGCCGGTGGCGGGGAAGCACGTTGCTGACAAATTGCGCTTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGC > NC_000913/2001769‑2002066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |