Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,744,675	Δ1 bp	coding (1219/1374 nt)	mdtK →	multidrug efflux system transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,744,674	0	G	.	100.0%	475.2 / NA	96	coding (1218/1374 nt)	mdtK	multidrug efflux system transporter
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (56/40);  total (56/40)

GATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAG  >  NC_000913/1744527‑1744819                                                                                                                                                    |                                                                                                                                                  gATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTgca                                                                                                                                                 <  2:955115/150‑3 (MQ=255)     ttGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTg                                                                                                                                             >  1:1220236/1‑149 (MQ=255)     ttGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTg                                                                                                                                             <  2:1220211/149‑1 (MQ=255)          ggcggcGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGa                                                                                                                                        <  2:317445/149‑1 (MQ=255)          ggcggcGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATc                                                                                                                                      >  1:801563/1‑151 (MQ=255)               cggTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTc                                                                                                                                 <  1:703957/151‑1 (MQ=255)                 gTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGt                                                                                                                               >  1:413760/1‑151 (MQ=255)                     atCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGa                                                                                                                            <  2:1206221/150‑1 (MQ=255)                      tCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAAc                                                                                                                          >  1:805811/1‑151 (MQ=255)                       cAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAAcc                                                                                                                         <  1:775614/151‑1 (MQ=255)                           tttCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATg                                                                                                                     >  1:138463/1‑151 (MQ=255)                             tCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATggg                                                                                                                   >  1:69853/1‑151 (MQ=255)                               tGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GTACTGACCGATCTGGTCGTTGAACCTATGGGGc                                                                                                                 >  2:328031/1‑151 (MQ=255)                               tGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGc                                                                                                                 >  2:185975/1‑151 (MQ=255)                                gACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATggg                                                                                                                   <  1:1047664/148‑1 (MQ=255)                                    cAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCcagca                                                                                                            <  1:914086/151‑1 (MQ=255)                                    cAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCcagca                                                                                                            <  2:551119/151‑1 (MQ=255)                                     aaTCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCcagca                                                                                                            <  2:374946/150‑1 (MQ=255)                                      aTCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAgg                                                                                                          >  1:1182125/1‑151 (MQ=255)                                      aTCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAgg                                                                                                          >  1:1343064/1‑151 (MQ=255)                                         cAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCtt                                                                                                       >  1:183320/1‑151 (MQ=255)                                         cAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCtt                                                                                                       <  1:1346156/151‑1 (MQ=255)                                         cAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCtt                                                                                                       <  2:1236617/151‑1 (MQ=255)                                            gTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTg                                                                                                    >  1:713582/1‑151 (MQ=255)                                             tGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTgg                                                                                                   >  1:1115352/1‑151 (MQ=255)                                               aTTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGa                                                                                                  >  1:3237/1‑150 (MQ=255)                                               aTTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGAt                                                                                                 <  1:642253/151‑1 (MQ=255)                                                  ggCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAgg                                                                                              <  2:122197/151‑1 (MQ=255)                                                     aGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCtt                                                                                           >  1:965223/1‑151 (MQ=255)                                                     aGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCtt                                                                                           >  1:741121/1‑151 (MQ=255)                                                     aGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCt                                                                                            <  1:912518/150‑1 (MQ=255)                                                      gTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCttt                                                                                          <  2:674236/151‑1 (MQ=255)                                                      gTGGGATTTTGCGAGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGCGCCAGCAGGCTTCTGGATAGGCttt                                                                                          >  2:911535/1‑151 (MQ=255)                                                       tGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCttt                                                                                          >  2:242491/1‑150 (MQ=255)                                                         ggATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttatt                                                                                       >  1:316183/1‑151 (MQ=255)                                                          gATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTttatta                                                                                      <  2:1224060/151‑1 (MQ=255)                                                           aTTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTtattat                                                                                     >  1:1000349/1‑151 (MQ=255)                                                              ttGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTg                                                                                   <  1:1196520/150‑1 (MQ=255)                                                               tGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGc                                                                                 >  1:223114/1‑151 (MQ=255)                                                                gCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGcc                                                                                <  1:740744/151‑1 (MQ=255)                                                                   tGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTg                                                                              >  1:796881/1‑150 (MQ=255)                                                                   tGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTg                                                                              >  2:778022/1‑150 (MQ=255)                                                                     gTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACg                                                                           <  1:287953/151‑1 (MQ=255)                                                                        ataAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCg                                                                        >  2:705817/1‑151 (MQ=255)                                                                         taAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCgg                                                                       >  1:978278/1‑151 (MQ=255)                                                                          aaaGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGc                                                                      >  2:124998/1‑151 (MQ=255)                                                                          aaaGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGc                                                                      >  2:1034206/1‑151 (MQ=255)                                                                          aaaGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGc                                                                      <  1:287142/151‑1 (MQ=255)                                                                           aaGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGc                                                                      >  1:85450/1‑150 (MQ=255)                                                                            aGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGc                                                                      >  1:694678/1‑149 (MQ=255)                                                                            aGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAg                                                                    <  1:185990/151‑1 (MQ=255)                                                                             gATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGc                                                                   <  1:52044/151‑1 (MQ=255)                                                                                aCGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCAt                                                                <  2:49793/151‑1 (MQ=255)                                                                                 cgcgTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCAtt                                                               <  1:429044/151‑1 (MQ=255)                                                                                   cgTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTat                                                             >  2:145050/1‑151 (MQ=255)                                                                                    gTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTatg                                                            >  1:464356/1‑151 (MQ=255)                                                                                    gTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTat                                                             >  2:567391/1‑150 (MQ=255)                                                                                      tCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTatga                                                           <  1:300852/150‑1 (MQ=255)                                                                                       ccATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTatgatg                                                         >  1:199264/1‑151 (MQ=255)                                                                                        cATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTatgatg                                                         >  2:419039/1‑150 (MQ=255)                                                                                             tCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGtt                                                    <  1:1351693/150‑1 (MQ=255)                                                                                             tCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTg                                                   >  1:183249/1‑151 (MQ=255)                                                                                               tataTTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCg                                                 >  2:1075355/1‑151 (MQ=255)                                                                                                atatTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGt                                                <  2:958755/151‑1 (MQ=255)                                                                                                atatTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGt                                                <  1:108557/151‑1 (MQ=255)                                                                                                  atTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTAt                                              >  1:118516/1‑151 (MQ=255)                                                                                                   ttACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATg                                             >  1:203406/1‑151 (MQ=255)                                                                                                   ttACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATg                                             >  1:958464/1‑151 (MQ=255)                                                                                                     aCCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATgag                                           <  1:96523/151‑3 (MQ=255)                                                                                                     aCCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCg                                           >  1:1082954/1‑151 (MQ=255)                                                                                                       cTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGt                                         >  2:708161/1‑151 (MQ=255)                                                                                                         ttACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGtt                                        <  2:577019/150‑1 (MQ=255)                                                                                                          tACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTcc                                      >  2:501639/1‑151 (MQ=255)                                                                                                          tACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTcc                                      >  2:176395/1‑151 (MQ=255)                                                                                                             ggCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGc                                   >  1:628142/1‑151 (MQ=255)                                                                                                                ttACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAAc                                >  2:553336/1‑151 (MQ=255)                                                                                                                ttACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAAc                                >  1:1236584/1‑151 (MQ=255)                                                                                                                 tACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAAc                                <  2:183245/150‑1 (MQ=255)                                                                                                                     gggTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTc                             <  2:1270341/149‑1 (MQ=255)                                                                                                                     gggTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCt                            <  2:1067464/150‑1 (MQ=255)                                                                                                                     gggTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCt                            <  1:1214997/150‑1 (MQ=255)                                                                                                                     gggTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTg                           >  1:890568/1‑151 (MQ=255)                                                                                                                     gggTGCTAGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCt                            <  2:1241772/150‑1 (MQ=255)                                                                                                                      ggTGCTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGc                          <  2:694667/151‑1 (MQ=255)                                                                                                                          cTGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTc                      >  2:1269370/1‑151 (MQ=255)                                                                                                                           tGGGCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTc                      >  1:925925/1‑150 (MQ=255)                                                                                                                            gggCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTc                      >  1:902056/1‑149 (MQ=255)                                                                                                                            gggCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTc                      >  1:1285158/1‑149 (MQ=255)                                                                                                                            gggCTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAg                    <  1:962951/151‑1 (MQ=255)                                                                                                                               cTTGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGcc                  >  1:1037188/1‑150 (MQ=255)                                                                                                                                 tGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTGTGGGGCCGGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTTCAGCGTCTGCCGTCAGCca                 <  2:291709/149‑1 (MQ=255)                                                                                                                                 tGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcatc               >  2:861149/1‑151 (MQ=255)                                                                                                                                 tGCCAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCca                 <  2:487748/149‑1 (MQ=255)                                                                                                                                   ccAAGCGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcatcat             >  2:1163076/1‑151 (MQ=255)                                                                                                                                   ccAAGCGGCTATATTCT‑GAACTGACCGATCTGGTCGTTGAGCCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCcatcat             >  2:430204/1‑151 (MQ=255)                                                                                                                                        cGGCTATATTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGc        >  1:580618/1‑151 (MQ=255)                                                                                                                                               atTCT‑GCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAg  <  2:1346795/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAG  >  NC_000913/1744527‑1744819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑