| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,440,937 | (CGCTCT)1→2 | coding (93/990 nt) | rpoA ← | RNA polymerase, alpha subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3440931 | 1 (0.010) | 99 (1.190) +CGCTCT |
88/274 | 0.0 | 99.0% | coding (99/990 nt) | rpoA | RNA polymerase, alpha subunit |
| ? | NC_000913 | 3440932 = | 1 (0.010) | coding (98/990 nt) | rpoA | RNA polymerase, alpha subunit | |||||
Only 100 of 105 total aligned reads displayed.
GAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATC > NC_000913/3440781‑3441079 | gAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCa < 2:1080376/151‑1 (MQ=255) aGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgc < 2:582394‑M1/150‑4 (MQ=255) ggATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctc < 1:6399‑M1/151‑6 (MQ=255) gATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctct > 1:440421‑M1/1‑145 (MQ=255) gATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctct > 1:1292084‑M1/1‑145 (MQ=255) aTTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctc > 2:806442‑M1/1‑144 (MQ=255) aTTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctc < 1:1210982‑M1/151‑8 (MQ=255) aTTTCCAAGATAACTTCCTGAACGCCTTCTGTGGTGCTGTACACATGTAGTACACCAACAATCTCAGCCCCGTTCTCCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGGATGGCCCAAGCCTCGctct < 2:1298092/150‑1 (MQ=255) tttCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcg > 1:945707‑M1/1‑143 (MQ=255) ccAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgct < 1:926599‑M1/150‑11 (MQ=255) cAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCACCCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCACAGCCAcgctctcgctct < 2:50879‑M1/151‑13 (MQ=255) atatCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaa > 2:218247‑M1/1‑135 (MQ=255) atCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaagg < 1:720587‑M1/150‑18 (MQ=255) tCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggc < 1:199215‑M1/147‑19 (MQ=255) ccTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctca > 1:771622‑M1/1‑128 (MQ=255) ccTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGATACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaa < 2:86341‑M1/150‑23 (MQ=255) gAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggt < 2:1298739‑M1/151‑27 (MQ=255) aCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtc > 1:607179‑M1/1‑123 (MQ=255) aCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctaaagggtca < 2:1062021‑M1/151‑29 (MQ=255) ccTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcacct > 2:298020‑M1/1‑120 (MQ=255) cttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggc > 2:1076465‑M1/1‑116 (MQ=255) tttGGTGCTGTACTCATGTAGTACACCATCAATTTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcg > 1:889365‑M1/1‑115 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgt > 1:243541‑M1/1‑114 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggc < 1:802959‑M1/149‑36 (MQ=255) ggTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGCTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgc < 1:16584‑M1/151‑40 (MQ=255) tGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcg > 2:15593‑M1/1‑107 (MQ=255) aCTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaac < 2:221389‑M1/150‑47 (MQ=255) cTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactc > 1:965128‑M1/1‑103 (MQ=255) aTGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcact > 2:222747‑M1/1‑100 (MQ=255) tGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcactt > 2:307733‑M1/1‑99 (MQ=255) gtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctc < 1:696476‑M1/151‑57 (MQ=255) taCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcg > 1:89779‑M1/1‑94 (MQ=255) acacCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcg > 2:136192‑M1/1‑93 (MQ=255) acacCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcg < 1:127764‑M1/150‑58 (MQ=255) cacCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgat > 1:30986‑M1/1‑92 (MQ=255) acCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgat > 1:371588‑M1/1‑91 (MQ=255) cATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatc > 2:1158543‑M1/1‑89 (MQ=255) aTCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatca < 1:927399‑M1/151‑64 (MQ=255) aTCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatc > 1:1332333‑M1/1‑88 (MQ=255) aTCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatc > 1:1111266‑M1/1‑88 (MQ=255) cAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaa < 1:625944‑M1/150‑65 (MQ=255) aaTCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacc > 2:1244361‑M1/1‑85 (MQ=255) ctcAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccagg > 2:164161‑M1/1‑82 (MQ=255) tcAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacca > 2:1224684‑M1/1‑81 (MQ=255) cAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggc < 2:204618‑M1/150‑71 (MQ=255) cAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccag < 1:431252‑M1/148‑69 (MQ=255) aaCCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgc > 2:236551‑M1/1‑79 (MQ=255) ccTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcgg > 2:565201‑M1/1‑77 (MQ=255) cTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggt > 2:365719‑M1/1‑76 (MQ=255) cGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttt < 2:457483‑M1/151‑78 (MQ=255) cGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttt < 1:1101125‑M1/151‑78 (MQ=255) cGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttt > 1:519668‑M1/1‑74 (MQ=255) cGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttt < 1:576559‑M1/151‑78 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 1:1076487‑M1/151‑79 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 1:1283365‑M1/151‑79 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt > 2:912410‑M1/1‑73 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 2:1292056‑M1/151‑79 (MQ=255) aCCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaa < 2:769008‑M1/151‑83 (MQ=255) aCCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttaga > 1:1111116‑M1/1‑69 (MQ=255) gcgcAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaact > 2:92295‑M1/1‑66 (MQ=255) cgcAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactc > 2:187994‑M1/1‑65 (MQ=255) cGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcac > 1:396494‑M1/1‑58 (MQ=255) aTCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaac < 1:966669‑M1/151‑98 (MQ=255) aTCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaac > 2:915872‑M1/1‑54 (MQ=255) tCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaacc > 2:1327480‑M1/1‑53 (MQ=255) cGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccc < 1:600027‑M1/151‑100 (MQ=255) cGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccc > 2:14569‑M1/1‑52 (MQ=255) cGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaacc < 1:478193‑M1/150‑99 (MQ=255) gATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccct < 1:774216‑M1/151‑101 (MQ=255) aTGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctg < 1:829160‑M1/151‑102 (MQ=255) tGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgc > 2:354137‑M1/1‑49 (MQ=255) agagCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcat > 1:1293248‑M1/1‑47 (MQ=255) gCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgt > 1:64113‑M1/1‑44 (MQ=255) cAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtg < 1:715680‑M1/151‑109 (MQ=255) gAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactctcttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtc < 1:368575‑M1/151‑111 (MQ=255) tACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctc > 2:489225‑M1/1‑38 (MQ=255) tACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctc > 2:1331775‑M1/1‑38 (MQ=255) gcAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttg < 1:475613‑M1/151‑120 (MQ=255) cAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttgg < 2:1000655‑M1/151‑121 (MQ=255) aGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggt < 2:622012‑M1/151‑122 (MQ=255) gCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtact > 2:436015‑M1/1‑27 (MQ=255) gTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaa < 1:480962‑M1/151‑127 (MQ=255) gTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaa < 2:30485‑M1/151‑127 (MQ=255) tACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagc > 2:1000652‑M1/1‑23 (MQ=255) aCCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgatctcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagct < 2:1193954‑M1/151‑130 (MQ=255) aCCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagc < 1:1348777‑M1/150‑129 (MQ=255) cccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctt < 1:1236804‑M1/151‑131 (MQ=255) cccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctt < 1:398172‑M1/151‑131 (MQ=255) cAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagcttt > 2:960813‑M1/1‑19 (MQ=255) agagTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttac > 1:852375‑M1/1‑18 (MQ=255) agTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttactt > 2:149699‑M1/1‑16 (MQ=255) tGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttgg > 2:196662‑M1/1‑12 (MQ=255) ggCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagt < 1:157927‑M1/151‑141 (MQ=255) gCCAAAGCCAcgctctcgctctaaaggctcaagggtctccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcatcgtgtcctctctttggtactaagctttacttggagta < 2:1312101‑M1/151‑142 (MQ=255) cAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaa > 1:1350972‑M1/1‑8 (MQ=255) cAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaa > 2:1264939‑M1/1‑8 (MQ=255) aaaGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaa > 1:158345‑M1/1‑7 (MQ=255) aaGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagc > 1:196020‑M1/1‑6 (MQ=255) aGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagct > 1:1104102‑M1/1‑5 (MQ=255) ccAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagctcg > 2:503567‑M1/1‑3 (MQ=255) | GAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATC > NC_000913/3440781‑3441079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |