Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 993,904 | 0 | A | C | 47.6% | 96.1 / 12.8 | 63 | G47G (GGT→GGG) | ssuB | aliphatic sulfonate ABC transporter ATPase |
Reads supporting (aligned to +/- strand): ref base A (24/9); new base C (0/30); total (24/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.50e-10 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CACCGATTTCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGG > NC_000913/993754‑994051 | caCCGATTTCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑Gccacca < 2:486584/151‑1 (MQ=255) ccGATTTCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCaccacc < 1:254822/151‑1 (MQ=255) cGATTTCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCg > 2:455754/1‑151 (MQ=255) tCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGc < 2:631430/150‑1 (MQ=255) cctcGGGAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACTCATCGCCTGCGGTT‑GGCGTTGCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCg < 2:796457/147‑1 (MQ=255) ccACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAGCACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACGACCGCTGCg < 2:163696/150‑1 (MQ=255) cACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑CCCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGc < 2:813994/151‑1 (MQ=255) gCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GACGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCcaccac < 1:429508/151‑1 (MQ=255) cAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCaccacc > 2:637550/1‑151 (MQ=255) cgcgCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCca < 1:1142149/151‑1 (MQ=255) aTCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAAc > 2:905525/1‑151 (MQ=255) tGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGAc > 1:62863/1‑151 (MQ=255) aaaaATCTTTGGCGTTTTTTCTTTAATTC‑CACCCG‑GGGGGGGGGTCCCCCCAAACAGCCCGCTTGGGGTG‑GGCTTTCCC‑AC‑CCCGCCCAGCGGCCGCAGAAGGGTTC‑TTTC‑GCCCCCACCGCGGCCCCCCACCACCGCCACAAACTGAc < 2:298473/149‑1 (MQ=255) aaaCATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCt > 1:555274/1‑151 (MQ=255) aaCATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTg > 1:413895/1‑151 (MQ=255) catcatTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGcc > 2:1083206/1‑151 (MQ=255) catTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCgg > 1:417386/1‑150 (MQ=255) cgcgTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAatat > 2:1099747/1‑151 (MQ=255) gcgTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATg > 2:790467/1‑151 (MQ=255) gcgTGTCTCCCTAATTTC‑CGGCCG‑GGGGTGTGGCCCCCGCTAACACCCCGCCGGGGGTG‑GGCTTTCCC‑AG‑CCCTGCCAGCAGGCGCAGCGGGTTCT‑TTTT‑CCCACCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGaa < 2:31305/147‑1 (MQ=255) gctttCTTTCTGAATTTCCAGCCG‑GGGGTGGGGCCCCCCCAAACCCACCGCCGGGGGTG‑GGCTTTCCC‑GG‑CCCGGCGGGCAGGCGCAGCGGGTTTT‑TTTT‑CCCACCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGaa < 2:1201537/143‑1 (MQ=255) cgTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGCAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGt > 1:321105/1‑151 (MQ=255) tgtCTTCCTGATTTC‑CACCCG‑GGGGTGGGGTCCCCGCAAACCCATCGCCGGCGTTT‑GGCTTTCCC‑AG‑CCCGCCCGGCGGGCGCAGCGGGGTCT‑TTTC‑CCCACCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAata < 2:640757/146‑1 (MQ=255) tCTTCCTAATTTT‑CAGCCG‑GGGGGGTGGTCCCCCCAAACCCACCGCCGGCGGTT‑GGCTTTCCC‑AG‑CCCTGCCAGCAGGCGCAGCGGGGTAC‑TTTG‑CCCCCCCCCGCTGCGCCCCACCACCGCCACAAACTGACCTGCCgg < 1:1256929/140‑1 (MQ=255) tCTTCCTAATTTC‑CACCCG‑GGGGTGTGGTCCCCGCAAACACCCCCCCTGGGTTT‑GGCTTTCCC‑AG‑CCCCCCCGGCAGGCGCAGCGGGTTAT‑TTTT‑CCCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTaa < 1:507165/149‑1 (MQ=255) tCTTCCTAAATTT‑CAGCCG‑GGGGTGGGGCGCCCGCAACCACATCGCTGGGGGTT‑GGCTTTCCC‑AG‑CCCTGCCAGCGGGCGCAGCGGGGTTC‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAatat < 1:1244218/145‑1 (MQ=255) ttCCTAATTTC‑CAGCCG‑GGGGTGGGGTCCCCGCAAACACATCG‑CTGGGGTTGGGCTTTCCC‑AG‑CCCTGCCGGCGGGCGCAGGGGGGTTT‑TTTT‑CCCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAatat < 1:1246879/143‑1 (MQ=255) cctaatttt‑CAGCCG‑GCGGTGGGGTCCCCGCAACCCCACCGCCTGGGGTG‑GGCTTTCCC‑AG‑CCCGCCCAGCGGGCGCAGCGGGTTAT‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAAt < 1:497100/141‑1 (MQ=255) ccTGATTTT‑CACCAG‑GGGGGGGGGGGCCCCCAAACACACCGCCGGCGGTG‑GGCTTTCCC‑AG‑CCCTGCCAGCAGGCGCAGAAGGGTTT‑TTTT‑CCCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAAt < 1:552634/147‑1 (MQ=255) ccTGAATTT‑CGCCCG‑GGGGTGTGGCCCCCGCAAACACATCGCCGGGGGTG‑GGTGTTCCC‑AC‑CCCTGCCAGCAGGCGCAGCGGGGTAC‑TTTC‑CCCACCACCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATcc < 2:814263/149‑1 (MQ=255) cgtgatttccgccca‑ggGGTGGGGTCCCCCCAAGCCCACCGCCGGGGGTT‑GGCGTCCCC‑CG‑CCCGGCAAGCGGGGGCCGCAGGTTCT‑TTTC‑GCCACCCCCGCTGCGCCCCCCAACCGCCACAAACTGACCTGCCGGAATATGTAAATcc < 2:296742/137‑1 (MQ=255) taaTTT‑CCGCCCGGCGGTGTGGTGCCCGCAAACACACCGCCGGGGGTT‑GGCTTTCCC‑AG‑CCCGGCCGGCGGGCGCAGCAGGGTAC‑TTTT‑GCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCa < 1:956291/147‑1 (MQ=255) atttt‑CAGCCG‑GGGGTGTGGCGCCCGCTACCACACCGCCGGGGGTG‑GGC‑TTTCC‑AGCCCCGGCCAGCGGGCGCAGGAGGGTCT‑TTTC‑CCCCCCACCTCGCCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATcc < 2:785106/143‑1 (MQ=255) ca‑gcGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACg > 1:812567/1‑151 (MQ=255) ggTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGatat > 2:652567/1‑151 (MQ=255) tggggtcCCCGCTAACCCCCCGCCGGGGGTG‑GGCTTTCCC‑AC‑CCCGCCCAGCGGGCGCAGCGGGGTCT‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGa < 1:928044/143‑1 (MQ=255) gtggcccccccaaaCACACCGCTTGGGTTT‑GGCTTTCCC‑AG‑CCCTGCCAGGGGGCGCAG‑AGGGTTCTTTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATAttt < 2:555269/138‑1 (MQ=255) ggtgCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTcc > 1:86690/1‑151 (MQ=255) ggtcCCCGCAAACACACCCCCGGGGGTG‑GGCTTTCCC‑AG‑CCCTGCCAGCGGGCGCAGCGGGGTAC‑TTTT‑GCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATAtt < 1:241517/147‑1 (MQ=255) gtgCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCcg > 2:837903/1‑151 (MQ=255) ccccctacccctccGCCGGCGTTT‑GGCTTTCCC‑AG‑CCCTGCCAGCGGCCGCAGCGGGTTTT‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGt < 1:277276/138‑1 (MQ=255) cccGCAACCACACCG‑CTGGGGTT‑GGGCTTTCCAAG‑CCCTGCCAGCAGGCGAAGCAGGGTAT‑TTTC‑CCCCCCCCCGCGGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCcgc < 2:1169075/149‑1 (MQ=255) accaccgcgcgTGCGTTG‑GGCGTCCCA‑AC‑ACCCGCCAGCGGGCGCAGAGGGTTTT‑TTTT‑CCCCCCCCCGCGGGGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATg < 2:896152/142‑1 (MQ=255) aaCACACCGCCTGGGTTG‑GGCTTTCCC‑AG‑CCCTGCCAGCGGGCGCAGCGGGGTTT‑TTTT‑CCCCCCCCCGCTGCGGCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATg < 1:828786/149‑1 (MQ=255) acaTCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGc > 1:866660/1‑151 (MQ=255) caTCGCGGGGGGTG‑GGCTTTCCC‑AG‑CCCTCCCGGCGGGCGCAGGGGGGTTT‑TTTT‑CCCCCCCCCGCGGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTg < 1:61755/149‑1 (MQ=255) caTCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCt > 2:334152/1‑151 (MQ=255) cGCCTGCGGTC‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTAc > 1:897215/1‑151 (MQ=255) ccggggttt‑GGCTTTCCC‑AC‑CCCGGCCGGCAGGCGAAGC‑GGGTTC‑TTTTCCCCCCCCCCGCGGCGCCCCACAACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCtt < 1:553624/140‑1 (MQ=255) ccTGGGGTG‑GGCTTTCCC‑AG‑CCCGGCCAGCGGGCGCAGCAGGGTTC‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCtt < 1:765000/147‑1 (MQ=255) gCGTTT‑GGCTTTCCC‑AG‑CCCTGCCAGCGGGCGCAGCGGGGTAT‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTg < 2:353131/141‑1 (MQ=255) gggttgggCGTTTCC‑AG‑CCCGCCGAGCAGGCGCAGCGGGTTTT‑TTTT‑CCCCCCCCCGCGGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTAc < 1:775023/140‑1 (MQ=255) tt‑GGCGTTCCC‑AG‑CCCGGCCAGCAGGCGCAGAAGGTTAT‑TTTT‑CCCCCCCCCGCTGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGc < 1:745403/145‑1 (MQ=255) gCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGca > 1:287107/1‑150 (MQ=255) tttCC‑AG‑CCCTGCCAGCAGGCGCAGCAGGGTTT‑TTTT‑CCCCCCCCCGCTGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGcaaca < 1:418902/150‑1 (MQ=255) ttccc‑AG‑CCCTGCCAGCAGGCGCAGCGGGTTTT‑TTTC‑CCCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGcaa < 1:1265661/145‑1 (MQ=255) ttcccaccccTGCCAGCGGGCGCAGCGGGTTTT‑TTTC‑CCCCCCCCCGCGGCGCCCCCCCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGcaaca < 2:771749/142‑1 (MQ=255) cccgcccAGCGGGCGCAGCGGGTTAC‑TTTC‑GCCCCCCCCGCGGCGCCCCCCCCCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGc < 2:379866/143‑1 (MQ=255) cccggcgggCGCAGCGGGTTCC‑TTTT‑CCCCCCCCCGCGGCGCCCCCCCCCCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCt < 2:491947/144‑1 (MQ=255) cgggCGCAGC‑GGGTTC‑TTTTCCCCCCCCCCGCGGCGCCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCt < 1:1011544/144‑1 (MQ=255) cagGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGc > 1:1220623/1‑150 (MQ=255) cagGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGc > 2:308685/1‑150 (MQ=255) agGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGc > 1:15964/1‑149 (MQ=255) ggctcttttccccacccCCGCGGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCa < 1:1070358/138‑1 (MQ=255) tttt‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCAt > 1:1131684/1‑151 (MQ=255) tt‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATAc > 2:800566/1‑151 (MQ=255) caccacCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTg > 1:68876/1‑151 (MQ=255) caccacCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTg > 2:176674/1‑151 (MQ=255) accaccGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTgg > 1:37547/1‑151 (MQ=255) accaccGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTgg > 1:152215/1‑151 (MQ=255) | CACCGATTTCCACGGTAGCAGACGCGCATCCTGAAACATCATTCGCGTGTCTTCCTGAATTT‑CAGCCA‑GCGGTGTGGTGCCCGCTAACACATCGCCTGCGGTT‑GGCGTTTCC‑AG‑ACCTGCCAGCAGGCGCAGCAGGGTAC‑TTTT‑GCCACCACCGCTGCGGCCCACCACCGCCACAAACTGACCTGCCGGAATATGTAAATCCAGTTGGTTCAGGACGATATTTTCCGCGTAATGTTTGCTTACTGCATTGAGCAACAATGGCGTGCCCTGGTTCAGACGAGCAGTATTCATACCGTGG > NC_000913/993754‑994051 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |