| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 646,765 | 0 | G | T | 39.7% | 152.5 / 35.6 | 78 | Q249K (CAA→AAA) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base G (8/39); new base T (31/0); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAG > NC_000913/646618‑646915 | aGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCaa < 1:759332/151‑1 (MQ=255) gTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCCTTTTTCaa > 1:629978/1‑150 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑TCCCCCCTTTTTCaataa > 1:907186/1‑150 (MQ=255) tAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATg < 2:655138/150‑1 (MQ=255) aataatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGttt < 1:156167/151‑1 (MQ=255) ataatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTTGGAT‑GCCCCCTTTTTTTAATAAAGttt > 2:1026303/1‑150 (MQ=255) ataatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GGCCCCCTTTTTTAATAAAGttt > 1:394153/1‑150 (MQ=255) taatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGCAT‑GCCCCCTTTTTTCAATAATGttt > 1:1288591/1‑149 (MQ=255) tAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGGTTGTGcc > 2:1322189/1‑150 (MQ=255) aaaTCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCt < 2:618267/150‑1 (MQ=255) aaaTCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 2:1075462/151‑1 (MQ=255) aTCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCCGAT‑GCCCCCCTTTTTGTATAATGTTTTCGcc > 1:1170440/1‑147 (MQ=255) tCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTCAATAATttttttgcccc > 2:1187286/1‑141 (MQ=255) tCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GGCCCCCTTTTTTAATTAAGTTTTCGcc > 1:1367574/1‑146 (MQ=255) tgtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAA‑GCCCCCCTTTTTCCATAATGTTTTTGCCCCgcgc > 2:731590/1‑150 (MQ=255) gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTa < 1:307658/151‑1 (MQ=255) cTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTccc > 2:904266/1‑142 (MQ=255) aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GGCCCCTTTTTTCAATAATATTTTCGCCTCCCGCCGTAgt > 1:667664/1‑149 (MQ=255) aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCa < 2:414703/151‑1 (MQ=255) aaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTGGAAT‑TCCCCCCTTTTTTAAAAATTTTTTGGCCTCCCGCTGTAgac > 2:457650/1‑146 (MQ=255) aCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAg‑cg < 1:625993/151‑1 (MQ=255) aGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAg < 2:162912/151‑1 (MQ=255) aGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAg < 2:953525/151‑1 (MQ=255) aGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑TTCCCCTTTTTTTAATAATATTTTTTCCCCGCGCTGTAGcc > 2:27106/1‑144 (MQ=255) aGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATTTTTTTGCCTCGCGCTGTAGCCAg‑cgc > 2:741927/1‑149 (MQ=255) ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAgg < 2:89403/151‑1 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAAG‑CCCCCCTTTTTTTAA‑AATTTTTTTGCCCCCCGCCGTAGcc > 1:760482/1‑141 (MQ=255) aGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCGCGCTGTAGCCAG‑CGCAGGcccc > 1:822227/1‑151 (MQ=255) tCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTCGATG‑GCCCCCTTTTTTTAA‑AATGTTTTTGCCCCCCGCCGTAGCCAG‑CGCAGGcccccccc > 1:1167841/1‑149 (MQ=255) cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGcccccccc > 2:305605/1‑148 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGcc < 1:124735/151‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCa < 2:263580/150‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCCCGCTGTAGCCAG‑CGCAGGgcccccccccccc > 2:1213899/1‑144 (MQ=255) gTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCCATAATATTTGGGCCCCCCCCTGTAGCCAGCCGCGGGccccccccccaccc > 1:831340/1‑143 (MQ=255) cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACcgcg < 2:317457/151‑1 (MQ=255) gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACcgcgcg < 1:383675/151‑1 (MQ=255) gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTTGAAT‑GCCCCCTTTTTTCAATAAATTTTGTGCCTCCCGCTGGAGCCAG‑TGCAGGCCCCCCCCCCCcccgcccgtcgtaa > 2:224270/1‑143 (MQ=255) gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCTTTTTTCCATAATTTTTTCGCCTCCCGCTGTTGCCAG‑CGCCGGCCCCCCCCCCCACcccgc > 2:475408/1‑142 (MQ=255) gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGCGAAA‑GCCCCCTTTTTTTTATAATTTTTGCCCCCCCCGCTGTAGGCAG‑AGCCCGCCCCCCTCcccccccccccttg > 2:720946/1‑138 (MQ=255) ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTg < 1:1309844/150‑1 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGGCCCCCTTTTTTC‑ATAATGTTTTTGCCCCCCGCCGTTGCCAA‑CGCAGGCCCCCCCCCCCCCCCCGCGATGGAAAGTTg > 2:85472/1‑148 (MQ=255) tGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTTAATAAATTTTTTGCCTCCCGCTGTAGCCCG‑CCCAGGGCCCCCCCGCccccccccgctg > 1:1057180/1‑130 (MQ=255) gATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATTTTTTCGCCCCGCGCTGTAGCCAG‑CGCAGGCCCCCCCCCCCCCCCCCCGATGCAAAGGTGGTATCG‑CCGGTGGTCGcc > 2:1068169/1‑151 (MQ=255) tACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATTTTTTCGCCTCGCGCCGTAGCCAG‑CGCCGGCCCCCCCCCCCCCCCCCCGATGCCACCGTGGGATTG‑CCCCTGGTCGcc > 1:897096/1‑149 (MQ=255) cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAg < 1:1085933/150‑1 (MQ=255) cTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAA‑GCCCCCCTTTTTCAATAATGTTTTTGCCCCGCCCTGTAGCCAG‑CGCAGGCCCCCCCCCCCCCCCCCCGGTGCAACGCTGGGGTCG‑CCGTTGATCGcc > 2:685949/1‑141 (MQ=255) tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAGT‑GCCCCCCTTTTTCAATAAAGTTTTGGCCTCCCGCCGTAGCCAG‑CGCCGGCCCCCCCCCCCCCCCCGCGGTGCAACGGTGGGGTCG‑CCGCTGGTCGCCATCAGTAgg > 1:528505/1‑149 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGc < 2:1283035/151‑1 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGc < 2:1147084/151‑1 (MQ=255) cGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCaa < 1:741922/151‑1 (MQ=255) cGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCa < 1:174510/150‑1 (MQ=255) gCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTa < 1:1152274/149‑1 (MQ=255) gCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTa < 1:468327/149‑1 (MQ=255) gCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 1:1288469/150‑1 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc < 1:965453/151‑1 (MQ=255) aTAATCGAGATCGGC‑GGGGGGTCGGAA‑GTCCCCCTTTTTCAAAAAATTTTGCGCCTCGCGCCGTAGCCAG‑CGCAGGCCCCCCCCCCCCCCCCCCGGTGCAAAGTTTGTATTGCCCGTTG‑TCGCCCTCAGTAGGGGGAAGGGATCGAg > 1:242459/1‑147 (MQ=255) cGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCa < 2:113634/150‑1 (MQ=255) aTCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa < 2:792093/151‑1 (MQ=255) cggc‑ggGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAg < 1:732430/150‑1 (MQ=255) ggc‑ggGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGa < 1:1223974/151‑1 (MQ=255) ggc‑ggGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGa < 1:443367/151‑1 (MQ=255) ggggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCt > 2:13578/1‑150 (MQ=255) ggggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTa < 1:238024/151‑1 (MQ=255) ggggTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTa < 2:1125266/151‑1 (MQ=255) gcggtCGAAT‑GCCCCCTTTTTGCAATCATGTCTCCGCCGCGCGCTGCAGCCCG‑CGCAGGCCCCGCTCGCCACCACGCGGTGGTTCGCGGGACCGG‑CCGGTGATCTTGATCCGTAGGACCAAGTGATCGAGCTATCCGAGCTAAGGAtata > 1:991170/5‑150 (MQ=255) cGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAAcccc < 1:970456/150‑1 (MQ=255) cGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCt < 1:492085/151‑1 (MQ=255) gAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTg > 1:806754/1‑151 (MQ=255) aT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGAt > 2:616718/1‑151 (MQ=255) cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATcc > 2:1361847/1‑150 (MQ=255) cccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCca < 2:1025717/151‑1 (MQ=255) ccccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcag < 2:246095/151‑1 (MQ=255) cccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcagc > 1:641287/1‑151 (MQ=255) cccTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcagc > 1:696530/1‑151 (MQ=255) ttttGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcagcag < 1:563988/149‑1 (MQ=255) ttttGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCcagcag > 1:669225/1‑149 (MQ=255) tttGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCagag < 1:1026294/150‑1 (MQ=255) tGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTg < 2:273547/150‑1 (MQ=255) gCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTg > 1:870525/1‑149 (MQ=255) gCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAg < 2:908107/151‑1 (MQ=255) | AGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAG‑CGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCG‑CCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCAGGATCTAACCCCTGATCCAGCAGAGTGAG > NC_000913/646618‑646915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |