Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 3,440,937 (CGCTCT)1→2 coding (93/990 nt) rpoA ← RNA polymerase, alpha subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 34409310 (0.000)65 (1.090)
+CGCTCT
64/274 0.0 100% coding (99/990 nt) rpoA RNA polymerase, alpha subunit
?NC_000913 3440932 = 0 (0.000)coding (98/990 nt) rpoA RNA polymerase, alpha subunit

AGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAGG  >  NC_000913/3440782‑3441082
                                                                                                                                                      |                                                                                                                                                      
atttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctc                                                                                                                                                        >  1:743656‑M2/151‑151 (MQ=255)
    ccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctc                                                                                                                                                    >  1:138628‑M2/147‑151 (MQ=255)
    ccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctc                                                                                                                                                    <  1:47447‑M2/5‑1 (MQ=255)
     caggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctct                                                                                                                                                   <  2:596708‑M2/6‑1 (MQ=255)
      aggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTa                                                                                                                                                  <  1:553540‑M2/7‑1 (MQ=255)
        gatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTaaa                                                                                                                                                <  2:142698‑M2/9‑1 (MQ=255)
         atatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTaa                                                                                                                                                 >  2:157746‑M2/142‑149 (MQ=255)
         atatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAg                                                                                                                                               <  1:125420‑M2/10‑1 (MQ=255)
               tcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCa                                                                                                                                          <  1:609616‑M2/15‑1 (MQ=255)
                cctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCaa                                                                                                                                         <  2:104624‑M2/16‑1 (MQ=255)
                   gaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAggg                                                                                                                                      >  2:710488‑M2/132‑150 (MQ=255)
                    aacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    >  2:743742‑M2/131‑151 (MQ=255)
                    aacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    <  2:477963‑M2/21‑1 (MQ=255)
                     acgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    >  2:387953‑M2/130‑150 (MQ=255)
                      cgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCAc                                                                                                                                  >  2:968719‑M2/129‑151 (MQ=255)
                         cttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCt                                                                                                                                <  1:27238‑M2/25‑1 (MQ=255)
                           tctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCtt                                                                                                                               <  1:339641‑M2/26‑1 (MQ=255)
                           tctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTgg                                                                                                                             >  1:706093‑M2/124‑151 (MQ=255)
                            ctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            >  2:154214‑M2/123‑151 (MQ=255)
                             tttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            >  2:630221‑M2/122‑150 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            <  1:243183‑M2/29‑1 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            <  1:771553‑M2/29‑1 (MQ=255)
                                      gtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCg                                                                                                                    <  1:356125‑M2/37‑1 (MQ=255)
                                      gtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCg                                                                                                                    <  2:845080‑M2/37‑1 (MQ=255)
                                           catgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTc                                                                                                               <  1:814965‑M2/42‑1 (MQ=255)
                                            atgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACt                                                                                                            >  1:921808‑M2/107‑151 (MQ=255)
                                             tgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACtt                                                                                                           >  2:57785‑M2/106‑151 (MQ=255)
                                                   acaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCg                                                                                                      >  2:878‑M2/100‑150 (MQ=255)
                                                   acaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCg                                                                                                      <  1:964358‑M2/51‑1 (MQ=255)
                                                     accatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGata                                                                                                   <  1:876626‑M2/54‑1 (MQ=255)
                                                      ccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGatat                                                                                                  >  1:495386‑M2/97‑151 (MQ=255)
                                                       catcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATc                                                                                                 <  1:80424‑M2/56‑1 (MQ=255)
                                                          caatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAAc                                                                                              <  2:589341‑M2/59‑1 (MQ=255)
                                                           aatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAAcc                                                                                             >  1:242591‑M2/92‑151 (MQ=255)
                                                                caacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCa                                                                                            <  2:121644‑M2/61‑1 (MQ=255)
                                                                 aacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGgcgc                                                                                       >  1:422065‑M2/86‑151 (MQ=255)
                                                                        gtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTa                                                                                <  2:328407‑M2/73‑1 (MQ=255)
                                                                         tcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGtttt                                                                                 >  1:247766‑M2/78‑149 (MQ=255)
                                                                          caccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAg                                                                               <  2:848630‑M2/74‑1 (MQ=255)
                                                                            ccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCATGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGaa                                                                             <  2:138630‑M2/76‑1 (MQ=255)
                                                                              gcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAAct                                                                          <  2:931923‑M2/79‑1 (MQ=255)
                                                                                   acccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTc                                                                     >  1:546718‑M2/68‑151 (MQ=255)
                                                                                     ccgtcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTca                                                                    >  2:655925‑M2/66‑150 (MQ=255)
                                                                                      cggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTcaca                                                                  <  2:314539‑M2/87‑1 (MQ=255)
                                                                                           tcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAAcc                                                             >  2:258633‑M2/60‑151 (MQ=255)
                                                                                             gatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCt                                                           >  1:308257‑M2/58‑151 (MQ=255)
                                                                                                  gagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCAtt                                                      >  1:309971‑M2/53‑151 (MQ=255)
                                                                                                   agcagaatacggcgcagtgcgttacccagagtatggccaaagccacgccctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtg                                                     <  2:567045‑M2/100‑1 (MQ=255)
                                                                                                     cagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtgtg                                                   >  1:121851‑M2/50‑151 (MQ=255)
                                                                                                              gcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCtt                                          <  2:829371‑M2/111‑1 (MQ=255)
                                                                                                                   gtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTa                                     <  2:667013‑M2/116‑1 (MQ=255)
                                                                                                                     gcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACt                                   <  1:352081‑M2/118‑1 (MQ=255)
                                                                                                                      cgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACt                                   >  1:453823‑M2/33‑150 (MQ=255)
                                                                                                                      cgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTa                                  <  2:226239‑M2/119‑1 (MQ=255)
                                                                                                                       gttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTaa                                 <  2:511482‑M2/120‑1 (MQ=255)
                                                                                                                       gttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTaa                                 <  2:222176‑M2/120‑1 (MQ=255)
                                                                                                                       gttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTaa                                 <  2:817812‑M2/120‑1 (MQ=255)
                                                                                                                        ttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTa                                  >  1:23577‑M2/31‑149 (MQ=255)
                                                                                                                             cagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTa                           <  1:628888‑M2/126‑1 (MQ=255)
                                                                                                                                agtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACtt                        <  1:340810‑M2/129‑1 (MQ=255)
                                                                                                                                 gtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACtt                        >  1:561615‑M2/22‑150 (MQ=255)
                                                                                                                                        caaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTaaa                <  2:338896‑M2/137‑1 (MQ=255)
                                                                                                                                        caaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTaaa                <  2:951098‑M2/137‑1 (MQ=255)
                                                                                                                                         aaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAg               <  2:507623‑M2/138‑1 (MQ=255)
                                                                                                                                          aagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGc              <  2:576568‑M2/139‑1 (MQ=255)
                                                                                                                                           agccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCt             <  2:901585‑M2/140‑1 (MQ=255)
                                                                                                                                            gccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTc            <  1:743734‑M2/141‑1 (MQ=255)
                                                                                                                                             ccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTcg           <  2:459345‑M2/142‑1 (MQ=255)
                                                                                                                                              cacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTcg           >  2:458461‑M2/9‑150 (MQ=255)
                                                                                                                                                 gctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTcgacg        >  1:461376‑M2/6‑150 (MQ=255)
                                                                                                                                                  ctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGAt      >  1:646557‑M2/5‑151 (MQ=255)
                                                                                                                                                    ctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATc     >  1:933630‑M2/3‑150 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCa    >  2:49535/1‑149 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAgg  >  2:867266/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
AGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAGG  >  NC_000913/3440782‑3441082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.