Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,556,207	0	T	C	47.6%	76.1 / 22.6	64	S215G (AGT→GGT)	rtcA	RNA 3'‑terminal phosphate cyclase
Reads supporting (aligned to +/- strand):  ref base T (28/5);  new base C (0/30);  total (29/35)
Fisher's exact test for biased strand distribution p-value = 5.91e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACC  >  NC_000913/3556059‑3556357                                                                                                                                                        |                                                                                                                                                       gCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTcc                                                                                                                                                      <  2:131783/151‑1 (MQ=255)   cGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTcccc                                                                                                                                                    <  1:828272/151‑1 (MQ=255)   cGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTcccc                                                                                                                                                    >  2:400060/1‑151 (MQ=255)    gCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCg                                                                                                                                                   >  2:664566/1‑151 (MQ=255)       accaccTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGcc                                                                                                                                                 >  1:304267/1‑150 (MQ=255)         caccTCGGCCCTGTCGCGCTTGTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCCCTTTCAACTTCAAGCGAGACGGTATTCCCC‑GGCCCC‑TGGTCCCGCGGCAGTTTATGAATATTCTGTTCATGCAGGAAAAAACCCCCCGCCa                                                                                                                                                <  1:148441/149‑1 (MQ=255)              cGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGc                                                                                                                                         >  1:930207/1‑151 (MQ=255)               ggCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCg                                                                                                                                        >  2:532503/1‑151 (MQ=255)                    tGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGAttt                                                                                                                                    >  1:142359/1‑150 (MQ=255)                     gACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTc                                                                                                                                   >  2:575024/1‑150 (MQ=255)                          gcTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTc                                                                                                                             >  2:269086/1‑151 (MQ=255)                            tttcccccGACAAAAAAAAAGCGTTG‑GGTGATTTTTCCACTTTCGACTAAAAGGGAGACGTTATCCCCC‑GCCCCC‑GGGTCGCGCGGCGGTTTATAAATTTTCTGTTAAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGc                                                                                                                               <  1:47282/141‑1 (MQ=255)                                cgccGAGGAAAAAAAAGCGTTG‑GTTTATATTTTCGCTTCCTAATCCAGCCGAGGCGATTTTCCCG‑GGCCCC‑TGGCCGCGCGGCAGTTTAGAAATTTTCTTTCCAGGCAGGAAAAAGCCCCCCGCCAGTGTAGCGATTTCACGCTCAg                                                                                                                           <  2:423339/145‑1 (MQ=255)                                   cgacgaCAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATg                                                                                                                    >  2:556425/1‑151 (MQ=255)                                   cgaaccaaaaaaaAGGTTCGGGTAATTTTTCCTCTTTCGGCTCAAAGCGAGAGGTTATTCCCC‑GCCCCC‑TGGGCGCGCGGAGGGTAAAAAATATTTTTTTCAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCa                                                                                                                         <  1:19174/140‑1 (MQ=255)                                      cgacAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGgcg                                                                                                                 >  2:748676/1‑151 (MQ=255)                                        aaaaaaaaGCTTTG‑GGTGATTTTTTCCCTTTCGCCTCAAAGCGAGACGGTTTTCCCC‑GGCCCC‑TGGTCGCGCGGCAGTTTATAAATTTTCTTTTCATGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGgcg                                                                                                                 <  2:942483/147‑1 (MQ=255)                                          aaaaagGCGTTC‑GGTGATTTTTTCCCTTCCGCCTCAAAGGGAGCCGTTATCCCCC‑GCCCCT‑GGGTCGCGGGGCAGTTTAGGAATATTCTGTTCAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc                                                                                                             <  1:780102/151‑1 (MQ=255)                                          aaaaaaGCGTCG‑GGTAATTTTTTCTCTTCCGCCTCAAAGCG‑GACGGTTTTACCCGGGCCCC‑GGGCCGCGCGGCAGTTTATAATTTTTCTGTTCAGGAGGGAAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg                                                                                                              <  2:427841/150‑1 (MQ=255)                                              aaGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCacac                                                                                                         >  1:615541/1‑151 (MQ=255)                                                 cGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACAcc                                                                                                        >  1:459886/1‑149 (MQ=255)                                                   ttC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCt                                                                                                    >  1:679539/1‑151 (MQ=255)                                                     c‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTa                                                                                                   >  2:937335/1‑150 (MQ=255)                                                       ggtattatTTTCCCTTCCGACTTCAAGGGAGCCGGTATTCCCC‑GCCCCC‑GGGCCGCGCGGAGGTTTATAAATTTTCTGTTCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTa                                                                                                   <  1:171914/144‑1 (MQ=255)                                                       ggTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTaa                                                                                                  >  1:793355/1‑150 (MQ=255)                                                         tGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAAt                                                                                                 >  1:603168/1‑149 (MQ=255)                                                         tGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAAt                                                                                                 >  1:288703/1‑149 (MQ=255)                                                         tGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAAt                                                                                                 >  1:798728/1‑149 (MQ=255)                                                         tGATATTTTCACTTTCGACTTCAAGCGAGACGGGATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACGCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTaa                                                                                                  >  1:66447/1‑148 (MQ=255)                                                                ttCCCTTCCGACTTAAAGCGAGACGGTTTTCCCC‑GCCCCC‑TGGTCGCGGGGCAGTTTATAAATTTTCTGTTCATGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTtc                                                                                         <  2:599475/150‑1 (MQ=255)                                                                ttCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAAAATGGCGCGGCACACCAGCTAATAGAACTtct                                                                                        >  2:354067/1‑151 (MQ=255)                                                                tccccTTTCGCCTACAAGCGGGACGGTATTCCCC‑GGCCCC‑TGGCCCCGCGGCAGGTTAGAAATTTTTTTTCCAGGAAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTtc                                                                                         <  1:308903/146‑1 (MQ=255)                                                                   ccTTTCGCCTTCAAGCGAGCCGGTATTCCCC‑GGCCCC‑GGGCCGCGCGGCGGTTTATAAATTTTCTGTTAAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTcc                                                                                      <  1:556569/149‑1 (MQ=255)                                                                        cGACTAAAAGCGAGCCGGTATCCCCC‑GGCCCC‑TGGCCGCGCGGCGGTTTATAAATTTTCTGTTCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCa                                                                                 <  1:286176/150‑1 (MQ=255)                                                                           cTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTg                                                                             >  1:466838/1‑151 (MQ=255)                                                                                aGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcaca                                                                         >  2:637742/1‑150 (MQ=255)                                                                                    agaCGGTATTCCCC‑GCCCCC‑TGGTCGCGCGGCAGGTTATAAATATTCTGTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATg                                                                      <  1:645194/149‑1 (MQ=255)                                                                                     gaCGGTATTCCCC‑GGCCCC‑TGGCCGCGCGGCAGTTTATAAATTTTCTTTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGtt                                                                    <  2:642023/150‑1 (MQ=255)                                                                                      aCGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTcc                                                                  >  2:195466/1‑151 (MQ=255)                                                                                        gttATTCCCC‑GCCCCC‑GGGTCGCGCGGCAGTTTATAAATTTTCTTTTCATGGAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg                                                                <  1:631491/149‑1 (MQ=255)                                                                                         gtttttccc‑GGCCCCGGGGCCGCGCGGCAGTTTAGGAATTTTCTGTTCTGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTccc                                                                 <  1:556827/144‑1 (MQ=255)                                                                                           aTTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCgcgc                                                             >  1:929752/1‑151 (MQ=255)                                                                                           aTTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCgcgc                                                             >  2:839005/1‑151 (MQ=255)                                                                                            ttcccc‑GCCCCC‑TGGTCGCGGGGAAGGTTATAAATTTTCTGTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg                                                                <  2:284627/144‑1 (MQ=255)                                                                                             acccc‑GGCCCC‑TGGTCGCGGGGCAGGTTATGATTATTCTGTTCATGGAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTc                                                           <  2:302905/149‑1 (MQ=255)                                                                                               ccc‑GGCCCG‑TGGCCGCGCGGCAGGTTATAAATTTTCTGTTCAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCt                                                            <  1:642944/148‑1 (MQ=255)                                                                                                   ggCCCC‑TGGTCGGGGGGCAGTTTATAAATTTTTTGTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCa                                                       <  1:748667/150‑1 (MQ=255)                                                                                                     cccc‑TGGTCGCGCGGCAGGTTATAAATTTTTTGTCCATGAAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCaa                                                      <  2:742276/149‑1 (MQ=255)                                                                                                      ccc‑TGGTCGCGCGGCAGTTTATGAATTTTCTGTTCATGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGtt                                                   <  2:85285/151‑1 (MQ=255)                                                                                                      ccc‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGtt                                                   <  1:269750/151‑1 (MQ=255)                                                                                                              cgcgcgGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAgg                                             >  1:514537/1‑150 (MQ=255)                                                                                                               gcgcgGCAGGTTATAAATTTTCTTTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGc                                                 <  2:605780/145‑1 (MQ=255)                                                                                                                 gcgGCAGTTTATGAATTTTTTGTTAAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGgtgt                                          <  1:104885/150‑1 (MQ=255)                                                                                                                   ggcggtttATAAATTTTTTTTTCAGGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGgtg                                           <  2:73573/141‑1 (MQ=255)                                                                                                                   ggCAGTTTATAAATTTTCTGTTCATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGtt                                         <  1:698388/149‑1 (MQ=255)                                                                                                                         ttagaaaTATTCTGTTCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGAt                                  <  1:28110/145‑1 (MQ=255)                                                                                                                         ttATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATg                                 >  1:300408/1‑151 (MQ=255)                                                                                                                         ttATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATg                                 >  1:761562/1‑151 (MQ=255)                                                                                                                         taagaaaTATTCTGTTCATGCAGGAAAACCCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGtt                                         <  2:898305/138‑1 (MQ=255)                                                                                                                                ttttctttgcagccAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCa                              <  2:729448/134‑1 (MQ=255)                                                                                                                                   tCTGTTCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCg                        <  2:914303/150‑1 (MQ=255)                                                                                                                                     ttttCATGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCg                        <  1:700462/146‑1 (MQ=255)                                                                                                                                             cAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGtt             >  2:460681/1‑151 (MQ=255)                                                                                                                                                    aaaCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGccacca      <  2:330502/151‑1 (MQ=255)                                                                                                                                                        tCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACAcc  >  2:888943/1‑151 (MQ=255)                                                                                                                                                        tCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACAcc  >  2:930784/1‑151 (MQ=255)                                                                                                                                                        |                                                                                                                                                       GCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCCC‑TGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACC  >  NC_000913/3556059‑3556357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑