Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,434,8820TG42.6% 104.3 / 11.9 61Y252S (TAC→TCC) truAtRNA pseudouridine(38‑40) synthase
Reads supporting (aligned to +/- strand):  ref base T (4/31);  new base G (26/0);  total (30/31)
Fisher's exact test for biased strand distribution p-value = 2.25e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAATATTCCTGACCA  >  NC_000913/2434736‑2435029
                                                                                                                                                   |                                                                                                                                                    
gTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCGGGCAGGGGaa                                                                                                                                                    >  1:172340/1‑149 (MQ=255)
     tatTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATTAAACCCGGCAGGGGAATACAcc                                                                                                                                              >  1:264687/1‑150 (MQ=255)
      atTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCAATCACGTCACGGTAATTCAcccc                                                                                                                                            >  1:350333/1‑149 (MQ=255)
      atTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGGAGATCATACCCGGCAGGGGAATCCAcccc                                                                                                                                            >  2:919487/1‑149 (MQ=255)
         tGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGTAGATTATACCGGGCAGGGGAATTCACcgc                                                                                                                                            >  1:304690/1‑148 (MQ=255)
         tGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCGGGCAGGGGAATCCACCGCGAc                                                                                                                                         >  2:307649/1‑151 (MQ=255)
           ccTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCa                                                                                                                                       <  2:362645/151‑1 (MQ=255)
               tGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATACCGGGCAGGGGAATCCACCGCGACCCGa                                                                                                                                     >  2:253782/1‑149 (MQ=255)
                gCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATAc                                                                                                                                  <  1:501608/151‑1 (MQ=255)
                     gTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGccc                                                                                                                             <  2:908840/151‑1 (MQ=255)
                      tACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGGAGATCATAACCGGCAGGGGAATCCACCCCGACCCGAAACAAccc                                                                                                                             >  2:461404/1‑150 (MQ=255)
                       aCTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCt                                                                                                                            <  1:109752/150‑1 (MQ=255)
                       aCTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGGTTTTGGAGATCATAACGGTCAGGGGAATCCACCCCGACCAGATACAGCCCtt                                                                                                                           >  1:377033/1‑151 (MQ=255)
                          cGTCAACTTTTAGGCTGTAACTACGTTGGCTACAGCCTGAAAGGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCTGTTTTGGAATATCATACCGGGCAGGGTAATCCACCGCGAGCAGATAGAGCCCTTc                                                                                                                          <  1:602922/149‑1 (MQ=255)
                               tCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATAACGGTCAGGGGAATCCACCCCCCCCAGATAAAGCCCCTCCGCtttt                                                                                                                  >  1:527938/1‑151 (MQ=255)
                                cTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATCATACCGGTCAGGGGAATCCACCGCGACCCGATACAACCCCTCCGCtttt                                                                                                                  >  2:247735/1‑150 (MQ=255)
                                  ttCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGc                                                                                                                <  1:652422/150‑1 (MQ=255)
                                   tCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGcc                                                                                                               <  1:176065/150‑1 (MQ=255)
                                     aGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGGAGATCATACCGGTCAGGGGAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTTcc                                                                                                               >  2:443367/1‑148 (MQ=255)
                                         tGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGGTTTTGGAAAACATACCCGTGCGGGGAATCCACCCCGACCAGAAACAGGCCCTCCGCTTTTGCCGt                                                                                                             >  1:218306/1‑146 (MQ=255)
                                          gTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTtgct                                                                                                         <  2:167661/149‑1 (MQ=255)
                                          gTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTtgct                                                                                                         <  1:713351/149‑1 (MQ=255)
                                            aaCTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATTATAACCGGCAGGGGAATCCAACCCGACCAGAAAAAGCCCCTCCCCCTTTTCCCTTGCTgcc                                                                                                      >  1:908437/1‑150 (MQ=255)
                                             aCTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCGGGCAGGGGAATCCACCCCGACCAGATACAGCCCCTCCGCTTTTGCCGTTGCTgccgc                                                                                                    >  2:309000/1‑151 (MQ=255)
                                                  gTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCg                                                                                               <  1:777748/151‑1 (MQ=255)
                                                  gTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCg                                                                                               <  2:390617/151‑1 (MQ=255)
                                                   ttGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCCGGCAGGGGAATCCACCCCGACCAGATACAACCCTTCCCCTTTTTCCGTTGCTgccccc                                                                                                   >  2:491967/1‑146 (MQ=255)
                                                     ggCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGtt                                                                                             <  1:559761/150‑1 (MQ=255)
                                                     ggCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTc                                                                                            <  1:468306/151‑1 (MQ=255)
                                                      gCTACAGCCTGAAATGTTCCGAGCGTTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCt                                                                                           <  2:375183/151‑1 (MQ=255)
                                                         aCAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTg                                                                                          <  1:505153/149‑1 (MQ=255)
                                                              cTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAAAGCAAACCGGGCAGGGGAATTCACCGCGGCCAGAAACAACCCCTCCGCCTTTTCCGCTGCCGCCCCCCACGCTCTTTcc                                                                                       >  2:149802/1‑147 (MQ=255)
                                                                    tGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCCGGCAGGGGAATCCACCGCGACGAGATACAGCCCTTCCGCCTTTTCCGTTGCTGCCGCCCGCGCTCTGTCCTTTtccgccc                                                                             >  1:114941/1‑150 (MQ=255)
                                                                     gTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAg                                                                            <  1:607558/151‑1 (MQ=255)
                                                                     gTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAg                                                                            <  1:43917/151‑1 (MQ=255)
                                                                     gTTCCGACCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCa                                                                             <  1:295951/150‑1 (MQ=255)
                                                                             cATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGGTCATAACGGCCAGGGGAATTTACCGCGCCCAGCCACAACCCTTCCGCGTTTTTCCCTTCTGCCCCCCGCGGTCTGGCCttttc                                                                                  >  1:16805/1‑135 (MQ=255)
                                                                              attattCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGAACATTACCGACAGGGGAAATCACCGCGACCCGATAAAGGCCTTCCCCCTTTGCCGTTTTTGGCGCCAGCCGTCCTTCCCTTTCCCCCCGCAACCCTg                                                                    >  1:585406/1‑150 (MQ=255)
                                                                              attattCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCGGGCAGGGGAATCCACCCCGACCAGATACAGCCCTTCCGCCTTTGCCGTTGCTGCCCCCCGCGTTCTGTCCTTTGCCGCCAGCaa                                                                         >  2:1024595/1‑145 (MQ=255)
                                                                                 attCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTAt                                                                <  1:655414/151‑1 (MQ=255)
                                                                                   tctcGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATc                                                               <  2:864829/150‑1 (MQ=255)
                                                                                         tAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGGCAGGGGAATCCACCGCGACCAGATAAAGCCCTTCCGCTTTTTCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCCGCAACTCTGCTATcc                                                              >  2:641112/1‑145 (MQ=255)
                                                                                           gTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCGGTCAGGGGAAACCACCGCGGCCAGATACAGCCCCTCCCCTTTTTCCGTTGCTGCCCCCCGCGTTCTGTCCTTTTCCCCCAGCCACTCTGCCATCCCGCTCTcc                                                      >  1:96096/1‑151 (MQ=255)
                                                                                           gTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTcc                                                      <  2:252054/151‑1 (MQ=255)
                                                                                            tCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAGATGCTACCGGTCAGGGGAATCTACCCCGCCCCAAGACAACCCCTCCGCCTTTGCCGTTGCTGCCCCCAGCGGTCTGTTCTTTGTCCCCAAGAACTCTGCTATCCatcac                                                         >  2:169439/1‑143 (MQ=255)
                                                                                            tCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGAAGATCATACCCGGCAAGGGAATCCACCCCGAACCGATACAGCCCTTCCGCTTTTTCCGTTGCTGCCGCCCCCGGTTTGTTCTTTTCCGCCCGCAAATCTGCTAt                                                                >  1:355401/1‑140 (MQ=255)
                                                                                             ccGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGTAGTTTCTACCGGGTCGGGGAATGCACACCGACCAGATAAAGCCCCTCCCCTTTTTCCGCGGCTGCCCCCAACGTTTTGTTCTTTCCCGCCCGCCACTTTGCCCTCCAGCTCTcc                                                      >  1:162542/1‑149 (MQ=255)
                                                                                                ccAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTg                                                 <  1:194126/151‑1 (MQ=255)
                                                                                                       tAGCGGGCCCATTGGCGGTTTTTGAAGATCAAACCGGTCAGGGGAATCCACCGCGCCCCGATACAGCCCTTCCCCTTTTTCCGTTTCTGCCGCCAGCGTTCTGTCCTTTTCCGCCCGCAACTCTGCTTTCCCGCTCTCCCGCCGGTtgtg                                           >  1:911888/1‑150 (MQ=255)
                                                                                                          cGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCa                                       <  1:43930/151‑1 (MQ=255)
                                                                                                            ggCCCATTGGCGGTTTTTGGAGATTATAACGGTTAGGGTAATACACCGCCACCAGATACAGCCCTTCCGCTTTTTCCGTTGCTGGCCCCCGCGTTCTGTCCTTTGCCGCCCGCAAACCTGCTCTCCAGCTCTCCGGCCGGGTGTGGGCAcc                                     >  1:156454/1‑151 (MQ=255)
                                                                                                            ggCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCAcc                                     <  2:668630/151‑1 (MQ=255)
                                                                                                                 aTTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACtt                                <  1:575865/151‑1 (MQ=255)
                                                                                                                   tGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCCCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTcc                              >  1:810294/1‑151 (MQ=255)
                                                                                                                    ggCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTcc                              <  2:886164/150‑1 (MQ=255)
                                                                                                                                 aGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGa                 <  1:43398/151‑1 (MQ=255)
                                                                                                                                     cATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAat             <  2:784123/151‑1 (MQ=255)
                                                                                                                                     cATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAat             <  1:589828/151‑1 (MQ=255)
                                                                                                                                         ccGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAATATTc         >  1:674177/1‑151 (MQ=255)
                                                                                                                                         ccGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAATATTc         <  2:943957/151‑1 (MQ=255)
                                                                                                                                                gggTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAATATTCCTGACCa  <  1:48052/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCGACCAGATACAGCCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTGCCGACAATATTCCTGACCA  >  NC_000913/2434736‑2435029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: