| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,457,105 | 0 | A | G | 41.8% | 99.5 / 30.8 | 79 | I441V (ATC→GTC) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| Reads supporting (aligned to +/- strand): ref base A (12/34); new base G (33/0); total (45/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGT > NC_000913/4456965‑4457254 | ggcaggtggcagAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGa < 1:977107/150‑1 (MQ=255) gcagaagtggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGTCC‑ATCAGAAACTGCTgg > 2:988104/1‑151 (MQ=255) agaagtggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GTGGGGGCC‑ATCATGAACTGCTgg > 2:989160/1‑149 (MQ=255) agaagtggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGAt < 2:405966/151‑1 (MQ=255) agaagtggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGAt < 2:987665/151‑1 (MQ=255) ggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GTGGGGTCC‑ATCCGAAAATTCtgggtggg > 1:446543/1‑148 (MQ=255) ggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTg < 2:459455/151‑1 (MQ=255) cagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGc < 2:925532/151‑1 (MQ=255) aagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAACCGCCGGATGGGCTGGCg > 2:1080243/1‑149 (MQ=255) cTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGTCC‑ATCAGAAACTGCTGGGTGGGCTGGCgga > 2:968851/1‑145 (MQ=255) cGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCg < 1:125671/151‑1 (MQ=255) gTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTT‑GTGGGAACC‑ATCACGAACTGGTGGGTGGGGTGGGGGAGGAGgggg > 1:1169792/1‑151 (MQ=255) gTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTT‑GGGGGGTCC‑ATCAGAAAACGGTGGGTGGGCGGGCgaagaaagggg > 1:529087/1‑146 (MQ=255) gTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTG‑GGGGGGGCC‑CTCAGAAACTTCTGGATGGGGTGGCGAAGAAGGCgg > 1:263079/1‑151 (MQ=255) ttCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGTCC‑ATCAGAAAATGCTGGGTGGGCTGGCGAAGAAGGCgg > 2:857203/1‑150 (MQ=255) tCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGa < 2:917269/150‑1 (MQ=255) aGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGCTTTGTGGGGGAT‑C‑ATCAGTAACCGCTTGTTGGGGCGGTGGAGAAAGCgg > 1:90457/1‑147 (MQ=255) ccTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGTAC‑ATCAAAAAATTCTGGGTGGGGTGGCGAAGAAgggg > 1:391078/1‑142 (MQ=255) ccTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGGCC‑ATCAGAAACCGCTGGGTGGGGTGGGGGAGAAGGGGGAAGcc > 1:16967/1‑150 (MQ=255) gCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCcgc < 1:96473/149‑1 (MQ=255) acTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAAATGCTGGGTGGGGTGGGGAAGAAGGCGGGAGCCgcgc > 2:918059/1‑147 (MQ=255) ggAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGGCC‑ATCAGAAAATGCTGGGTGGGGGGGGGAAGAAGGCGGGAGCCGGGCAGGaaat > 1:771869/1‑149 (MQ=255) aGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTT‑GGGGGGGCC‑ATCAGAAAATGGTGGATGGGGGGGCGGAGAAGGGGGAAGACGCGCAGGaa > 1:117189/1‑147 (MQ=255) cGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGTGC‑ATCAAAAACTGCTGGGGGGGCGGGGGAAGAAAGGGGGAGGCGCGCAGAAAATCTGcc > 1:1206301/1‑149 (MQ=255) aTGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAg < 2:701603/151‑1 (MQ=255) gtgGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAAATGCTGGATGGGCTGGCGGAGAAGGCGGAAGCCGCGCAGTAATTTGGCCTTAGcc > 2:441392/1‑151 (MQ=255) gtgGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGcc < 2:990637/151‑1 (MQ=255) gtgGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGc < 1:156029/150‑1 (MQ=255) ggATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGcc > 2:561073/1‑149 (MQ=255) ggATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGATTTT‑GTGGGGACC‑ATCAGAAAATGCTGGGAGGGCTGGGGAAGAAGGCGGGAGGCGCGCAGGAAATCGGCCTTAGcccg > 1:1246272/1‑149 (MQ=255) aTACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAAAAACTGCTGGGAGGGCTGGCGAAGAAGGCGGGAGCCGCGCAGTAATTCGGCCCTAGcc > 2:504905/1‑147 (MQ=255) tACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGCCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGACGCGGCGGAATTCCGCCTTAGcc > 2:433952/1‑146 (MQ=255) cGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTT‑GTGGGGGCC‑GTTAGAAAATTCTGGATAGGCGGGGGGAGAAAGGGGAAGCCCCGCAGTAAGTTGGCCGTAGCCGGgtat > 1:27588/1‑150 (MQ=255) cTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAAATGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGGAATTTGGCCTTAGCCAGatat > 2:100467/1‑148 (MQ=255) tGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGCTTTG‑GTGGGGGCCAATCA‑AAACCACGGGAGGGGGTGGCCAAGAACACGGGAGCCGCGCAGGAACTCGGACtcaccgaca > 1:634973/1‑136 (MQ=255) ggCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGGCC‑CTCAGAAAATGCTGGATGGGGTGGGGGAGAAGGCGGGAGGCGCGCAGTCATTTGGCCTTTGCCAggaata > 1:351586/1‑142 (MQ=255) gCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATg < 2:931271/151‑1 (MQ=255) gCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATg < 1:927843/151‑1 (MQ=255) cAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGc < 1:2934/151‑1 (MQ=255) aGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGGTTC‑ATCAGAAAATGCTGGGTGGGCTGGGGGAGAAAGGGGGAGCCCCGCAGGAAATCTGCCCTTGCCCGATATAGTATGCg > 1:469616/1‑151 (MQ=255) aGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGTCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGGAGCCGCGCAGTAATTCGGCCCTAGCCAGATATAGTATGCg > 2:1172351/1‑151 (MQ=255) gATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAACTGCTGGGTGGGGTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTTGGCCCTAGCCAGATATAGTATGCGt > 2:916863/1‑151 (MQ=255) atatGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGt > 2:735103/1‑150 (MQ=255) atGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAACTGCTGGGTGGGCTGGCGGAGAAGGGGGAAGCCGCGCAGGAATTTGGCCTTAGCCAGATATAGTATGCGGAgg > 1:932229/1‑151 (MQ=255) atGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAgg < 1:270771/151‑1 (MQ=255) atGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAg < 2:584401/150‑1 (MQ=255) ggtgAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCgg < 1:524698/150‑1 (MQ=255) gAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATa < 1:959828/150‑1 (MQ=255) aaaaCCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GGGGGATCC‑ATCAGAAACCGTTGGATGGGCTGGCGCAGAAAGCGGAAGCCGCCCAGAAATTCTGCCCTAGACAGATATAGGATg > 2:105214/1‑136 (MQ=255) aaCCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGc < 2:561720/151‑1 (MQ=255) ccGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGt < 2:1035727/151‑1 (MQ=255) cGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGtt < 2:1074166/151‑1 (MQ=255) gCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTc < 2:77237/151‑1 (MQ=255) cTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GTGGGGGCC‑ATCAGAAACTCCTGGATGGGGTGGCGGAGAAAGCGGGAGCCGCGCCGGAAATCGGCCTTAGCCAGGTATAGTATGCGGAGGCCGGGTAAGGGGtt > 1:207270/1‑149 (MQ=255) ggCGACCATATTCTGGTGATGAGCAACGGCGGTTTTT‑GTGGGGTCC‑CTCAGAAACTGCTGGGTGGGGTGGCGAAGAAGGGGGGAGCCGCGCAGGAATTCGGCCCTAGCCAGATATAGTATGCGTAGGCCGGGTAAGGCGGTCAcgcc > 1:544715/1‑147 (MQ=255) ggCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCAt < 1:973893/151‑1 (MQ=255) cGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAAATGCTGGGTGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGGAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGGTCACGCCGCATcc > 2:1191303/1‑151 (MQ=255) gACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:399629/150‑1 (MQ=255) gACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:161735/150‑1 (MQ=255) gACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCg < 1:317867/151‑1 (MQ=255) gACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GGGGGGTCC‑ATCAGAAACTGCTGGATGGGGTGGCGGAGAAGGCGGGAGCCGCGCCATAAATCGGCCTTAGACCGATATAATATGCGGAGGGCCGGTAAGGCGGTCACGCCCCATcc > 1:750809/1‑150 (MQ=255) ccATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGGAGAAGGCGGAAGCCGCGCAGGAAATCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg > 2:637169/1‑150 (MQ=255) cATATTCTGGTGATGAGCAACGGCGGTTTTT‑GTGGGGTCC‑ATCAGAAACTGCTGGATGGGCTGGCGGAGAAGGCGGGAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGGTAAGGCGTTCACGCCGCATCCgg > 1:1107660/1‑149 (MQ=255) atatTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGGTCC‑ATCAGAAAATGCTGGGTGGGCTGGCGAAGAAGGCGGGAGGCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGGAGGCCGGGTAAGGCGGTTACGCCGCATCCgg > 1:1189956/1‑148 (MQ=255) atatTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt < 1:777292/151‑1 (MQ=255) atTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGGAGCCGCGCAGGAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCAttt > 2:494334/1‑151 (MQ=255) tGGTGATGAGCAACGGCGGTTTTG‑GGGGGATCC‑ACTAGAAAATGCTGGGTGGGCTGGCGAAGAAAGCGGGAGCCGCGCCGTAATTCGGCCCTCGCCCGATATAGTATGCGTAGGCCGGAAAAGGCGTTCACCCCGCATCCGGCCttt > 2:1067944/1‑147 (MQ=255) ggTGATGAGCAACGGCGGTTTTT‑GTGGGGTCC‑ATCAGAAACTGCTGGATGGGCTGGCGGAGAAAGCGGGAGCCGCGCCGTAAATCGGCCTTAGCCCGATATAGTATGCGTAGGCCGGGTAAGGCGGTCACCCCGCCTCCGGCATTTTAg > 1:754875/1‑149 (MQ=255) tgatgaGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAAATGCTGGGTGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGGAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATTTGAGc > 2:179227/1‑148 (MQ=255) tgatgaGCAACGGCGGTTTTG‑GTGGGAGCC‑ATCAGAAAATGCTGGGTGGGCTGGGGGAGAAGGCGGAAGCCGCGCAGTTAATCGGGCTTAGCCCGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCttt > 1:1038492/1‑144 (MQ=38) gatgaGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAg < 2:1124568/151‑1 (MQ=255) aaCGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGa < 2:891115/151‑1 (MQ=255) aCGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGAt < 1:916324/151‑1 (MQ=255) cggcggTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATg < 2:578735/151‑1 (MQ=255) ggcggTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc < 2:475822/151‑1 (MQ=255) gTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACg < 1:405891/151‑1 (MQ=255) ttttG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGc > 2:527480/1‑151 (MQ=255) gggATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGc < 2:446549/151‑1 (MQ=255) gATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGt > 2:899206/1‑151 (MQ=255) | GGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTG‑GTGGGATCC‑ATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGT > NC_000913/4456965‑4457254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |