| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,510,395 | 0 | C | A | 42.9% | 77.4 / 30.1 | 64 | S131R (AGC→AGA) | ydcR | putative DNA‑binding transcriptional regulator and putative aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (24/12); new base A (0/27); total (24/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.32e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGAGATGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAAC > NC_000913/1510248‑1510545 | tCGAGATGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCa > 1:326896/1‑149 (MQ=255) aTGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGc > 1:616744/1‑151 (MQ=255) tGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGcc > 1:998503/1‑151 (MQ=255) gAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGcc < 2:585162/150‑1 (MQ=255) aaGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGACCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGcc < 2:19085/149‑1 (MQ=255) cAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTg > 2:92710/1‑151 (MQ=255) actcTTATATTTTTGATTTGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCTTTT‑CCCGC‑CCCGCGACTTTTCCCCCTCC‑AACAACAAAC‑CCGCTCGCGGGCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGAt < 2:716802/148‑1 (MQ=255) cTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTg > 2:48415/1‑150 (MQ=255) ttATTTTTTTGATTTGTTGCGGGCCAGTCGCGTCCCGTCGGTCTTTCCTTTTGCCTCGCCCTTC‑CCCGC‑CCCGCGCTTTTCCCCCCCCC‑AACAACAAAC‑CCGCTCGCTGGCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGAt < 2:48497/147‑1 (MQ=255) ttATTTTTTTGATTTGTTGCGGGCCAGTCGCGACCCGGCGGTCGTCCCTTTTCCCTCGCCCTTC‑CCCGC‑CCCGCGTTTTTCCCCCCTCC‑AACAACAAAC‑CCGCTCGTTGGCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTg < 2:450678/149‑1 (MQ=255) tataTTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGaa > 2:268429/1‑150 (MQ=255) atatTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGaaa > 2:299743/1‑150 (MQ=255) tttttttGATTTTTTGCGGGCCAGCCGCGATCCGCGGGTCGTCCCTTTCGCCTGGGCCTTC‑CCCGC‑CCCGCGACTTTCCCCCCCCC‑AAAAACAAAC‑CCTCCCGCGGGCGCGGGA‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGAtt < 1:398537/143‑1 (MQ=255) tatTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAAc > 2:181734/1‑151 (MQ=255) ttttttattggtgccAGCCCAGCGGCGTTCCGTCGTTCTTTCCTTTTCCCGGTGCCTTC‑CCCCC‑CCCGCGATTTCCCCCCCCCC‑AACAACAAAC‑CCGCTCGCGGGCGAGGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGaa < 1:637257/132‑1 (MQ=255) tttttGATATTTGGCAGCCCGGGCGCGACCCGTCGGTCGTTCCGTTTGCCCGGGCTTCC‑CCCGA‑CCCGCGACTTTCCCCCCCCC‑AACAACAAAA‑CCGCTCGCTGGCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAAc < 1:745159/149‑1 (MQ=255) tttttGATATGTGGCGGGCCGGCCGCGTCCCGTCGGTCGTCCCGTTTCCCTCGGCCTTC‑CCCGC‑CCCGCGTCTTTCCCCCCCCC‑AACAACAAAC‑CCGCGCGTGGGCGCAGAA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACt < 1:804514/150‑1 (MQ=255) ttttAATTTGTTGCGGGCCAGTCGCGACCCGTCGTTCTTTCCGTTTCCCTCGGCCTTC‑CCCGC‑CCCGCGACTTTCCCCCCCCC‑AACAACAAAC‑CCCCTCGCGGGCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACtt < 2:284532/150‑1 (MQ=255) gATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGc > 2:680867/1‑151 (MQ=255) ttttttGCGGGCCAGCCGCGTCCCGTCGGTCTTCCCTTTTCCCTCGCCCTTC‑CCCGC‑CCCGCGATTTTCCCCCCCCA‑AACAACTAAC‑CCGCTCGCTGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTAcc < 2:447346/143‑1 (MQ=255) tatGTTGCGGCCAAGCCGCGACCCGTGGGTCTTTCCGTTTCCCCCGCCCTTC‑CCCGC‑CCCGCGCTTTTCCCCCCCCC‑AACAACTAAC‑CCGCTCGCGGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTAcc < 2:380689/147‑1 (MQ=255) tGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAgg > 1:96404/1‑151 (MQ=255) tggcgggccggccGCGACCCGTCGGTCTTCCCGTTCGCCTCGCCCTTC‑CCCGC‑CCCGCGTTTTTCCCCCCCCC‑AACAACAAAC‑CCGCCGGCGGGCGCGGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCg < 2:721311/139‑1 (MQ=255) tGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGaa > 1:321194/1‑150 (MQ=255) ccccgccgcgccccGTGGGTCGTCCCTTTTCCCCGGGCTTTC‑CCCGC‑CCCGCGCTTTCCCCCCCCCC‑AACAATAAAC‑CCGCCCGTGGGCGGGGTA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGa < 1:348752/132‑1 (MQ=255) cggccgccacccGTCGTTCTTCCCGTTTCCCCCGCCTTTC‑CCCGC‑CCCGCG‑CTTTTCCCCCCCCAAAAAACAAAC‑CCGCCCGCGGCCGCAGGT‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAg < 2:470680/139‑1 (MQ=255) tCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTg > 2:849305/1‑151 (MQ=255) gcgATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCg > 2:759108/1‑151 (MQ=255) gATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTc > 1:758842/1‑151 (MQ=255) ccggggttcttcccGTTTCCCGCGCTCTTC‑CCCGC‑CCCGCG‑CTTTTCCCCCCCC‑AAAAACCAAACCCGCGCGGGGGGGCA‑GT‑AAGGAAAACCCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAgg < 1:578269/139‑1 (MQ=255) ccGTCGGTC‑TTCCCTTTTCCCCCGCCTTTCCCCGC‑CCCGCGTTTTTCCCCCCCCA‑AACAACAAAC‑CCCCTCGCGGGGGCAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAgg < 2:829341/151‑1 (MQ=255) ccgtggttgTTCCCTTTTCCCCCGCCTTTCCCCGC‑CCCGCGATTTTCCCCCCCCC‑AACAAAAAAC‑CCGCCCGCTGGCGCAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAg < 2:27710/146‑1 (MQ=255) cggtcgTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTAt > 1:967081/1‑151 (MQ=255) gttcttcccttttGCCCCGGCCTTC‑CCCGC‑CCCGCGATTTTCCCCCCCCA‑AAAAAAAAAA‑CCGCCCGCGGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTAt < 1:586487/140‑1 (MQ=255) ttttcccGTTTGCC‑CCGCCTTT‑CCCCC‑CCCCGGGTTTTTCCCCCCCC‑CAAAACAAAACCCCCTCGCGGGCGAAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTAtt < 2:133482/144‑1 (MQ=255) gTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCtc > 2:1021951/1‑151 (MQ=255) ccttttCCCCCGCCCTTC‑CCCGC‑CCCGCG‑CTTTTCCCCCCCCAAAAAACAAAC‑CCGCTCGCTGGCGCAGAT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCtc < 2:147541/145‑1 (MQ=255) cGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCtcgtc > 2:427859/1‑150 (MQ=255) cGTTTGCCCCGGCCTTTCCCCGC‑CCCCCGTCTTTCCCCCCCCA‑AAAAAAAAAC‑CCGCTCGCGGGCGCAGTT‑AAAAAAAC‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAg < 1:169345/138‑1 (MQ=255) tCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCt > 2:841834/1‑151 (MQ=255) gCCTTTCCCCGC‑CCCGCGACTTTCCCCCCCCA‑AACAACAAAC‑CCGCCCGCGGGGGCAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCt < 1:649258/149‑1 (MQ=255) gCCTTT‑CCCCCCCCCGCGTTTTTCCCCCCCCC‑AACAACAAAC‑CCGCCCGCGGGCGCAGGA‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCt < 1:497005/149‑1 (MQ=255) ttccccgc‑cccgcG‑CTTTTCCCCCCCCAAAAAACAAAC‑CCGCCCGCGGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCtt < 2:1010550/143‑1 (MQ=255) cccgc‑cccgcGCTTTTCCCCCCCCC‑AACAACAACC‑CCGCGCGCGGGCGCGGAT‑AAAAAAAC‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACa < 1:964857/146‑1 (MQ=255) cccccccccactccTTTCCCCCCCCC‑AAAAACGACC‑CCGCCCCTTGGCACAGAA‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAggg < 2:638349/137‑1 (MQ=255) cccGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCa > 1:142616/1‑149 (MQ=255) cccGCGACTTTCCCCCCCCA‑AACAACAAAC‑CCGCCCGCGGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCAcc < 2:478205/151‑1 (MQ=255) ttttCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTcc > 2:675172/1‑151 (MQ=255) ttCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCtg > 1:800674/1‑151 (MQ=255) ccccccCA‑AACAACAAAC‑CCGCCCGGTGGCGCAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCtg < 2:273146/149‑1 (MQ=255) aacaacAAAC‑CCGCGCGCGGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGt < 2:772877/151‑1 (MQ=255) caacTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTc > 2:50962/1‑150 (MQ=255) aacTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCAt > 1:893198/1‑151 (MQ=255) aacAAAC‑CCGCTCGCTGGCGCAGGA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAAtt < 2:317888/146‑1 (MQ=255) aaa‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CTGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCAtt < 1:292826/148‑1 (MQ=255) accccccccctGGCGCAGGA‑AACCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTGCCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCCGATGAAATTGTCATTACt < 1:306111/141‑1 (MQ=255) ccGCTCGCGGGCGCAGAA‑AAGAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGc < 2:615539/150‑1 (MQ=255) ctcgcgGGC‑CAGGTAAAACAAAC‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACt < 1:514053/145‑1 (MQ=255) gggCGGAGGA‑AAAAAAAC‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGc < 2:486090/147‑1 (MQ=255) ggggcAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTa < 2:848041/148‑1 (MQ=255) ggCGCAGGA‑AAAAAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTa < 1:953339/151‑1 (MQ=255) cAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAgg > 1:591287/1‑151 (MQ=255) aaGCAAAG‑CCGCCCCACCTATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCAt < 1:33534/149‑1 (MQ=255) aaGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCAtt < 2:305396/150‑1 (MQ=255) cAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAAc > 2:392593/1‑151 (MQ=255) cAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAAc > 2:380041/1‑151 (MQ=255) | TCGAGATGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTT‑CCCGA‑CCCGCGACTTTTCCCCCTCC‑AACAACTAAA‑CCGCTCGCTGGCGCAGGT‑AAGCAAAA‑CCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAAC > NC_000913/1510248‑1510545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |