New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 925901 =54 (0.650)13 (0.160)
+C
11/296 6.8 20.9% noncoding (71/88 nt) serW tRNA‑Ser
?NC_000913 = 1097399 45 (0.540)intergenic (+570/+166) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

TCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAA  >  NC_000913/925755‑926046
                                                                                                                                                      |                                                                                                                                                  
tCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑g                                                                                                                                                <  2:699433/150‑1 (MQ=255)
 cACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑Ga                                                                                                                                               <  1:342183/150‑1 (MQ=255)
     gCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAAcccc                                                                                                                                          <  1:434143/151‑1 (MQ=255)
     gCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAAccc                                                                                                                                           <  2:297074/150‑1 (MQ=255)
     gCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAAccc                                                                                                                                           <  1:1281440/150‑1 (MQ=255)
      ccGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑TGGG‑GGGGGGGG‑TTG‑GAAcccc                                                                                                                                          >  1:767714/1‑151 (MQ=255)
       cGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAT‑CA‑GGGGGGGA‑TCG‑GAAcccc                                                                                                                                          >  2:891753/1‑150 (MQ=255)
          aCAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGAt                                                                                                                                      <  2:570026/150‑1 (MQ=255)
          aCAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGAt                                                                                                                                      <  2:452085/150‑1 (MQ=255)
          aCAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGAt                                                                                                                                      <  1:1288649/150‑1 (MQ=255)
              gCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGtt                                                                                                                                 <  1:209053/151‑1 (MQ=255)
              gCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGtt                                                                                                                                 <  1:41571/151‑1 (MQ=255)
               cAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTC‑GAACCCCCGATACGtt                                                                                                                                 >  1:972763/1‑150 (MQ=255)
                aGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTT‑GAACCCCCCGTACggt                                                                                                                                 >  2:138456/1‑147 (MQ=255)
                     aGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑G‑GA‑GGGGGGGG‑GTT‑GAACCCCCGCTACGTTGCCGtat                                                                                                                          >  1:277098/1‑151 (MQ=255)
                                   aaCATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAg                                                                                                             <  2:1144974/150‑1 (MQ=255)
                                    aCATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGc                                                                                                           <  1:1204145/151‑1 (MQ=255)
                                     cATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTT‑TCACCCCCCCCCCGGTTGCGTATACACACttttcccg                                                                                                            >  1:181912/1‑144 (MQ=21)
                                     cATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCg                                                                                                          <  1:1109475/151‑1 (MQ=255)
                                       tACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTC‑GAACCCCCCCAACGGTGCCGTATTCACCCCTTTCCGGCGTg                                                                                                        >  2:634952/1‑151 (MQ=21)
                                          tCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑GTT‑GAAACCCCGCTACGTTGCCGGATAAACACTTTCCCAGCGTg                                                                                                        >  2:1017019/1‑148 (MQ=21)
                                           ccACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCt                                                                                                      <  2:147957/149‑1 (MQ=255)
                                            cACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCt                                                                                                   <  2:519549/151‑1 (MQ=255)
                                             aCCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑GTT‑GAAACCCCCCTAACTTGTCGCATAAAAACTTTTCAGGCGGGCTcc                                                                                                    >  1:1273192/1‑149 (MQ=21)
                                               ccGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCa                                                                                                <  1:21178/151‑1 (MQ=255)
                                                      ccaTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTc                                                                                         <  2:777161/151‑1 (MQ=255)
                                                      ccaTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTc                                                                                         <  2:823514/151‑1 (MQ=255)
                                                        aTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑GTT‑GCACCCCCCATACGTTTCCCTATAAACACTTTTCAGGCGGGGTCCCTCAGCCAccccg                                                                                       >  2:610936/1‑147 (MQ=18)
                                                           ttCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑GTCGGAACCCCCG‑TACGTTGCCGTATATACACATTTCCGGCGGGCTCCTTTAACCACCCGGac                                                                                     >  1:170905/1‑150 (MQ=17)
                                                            tCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GG‑GGGGGGGG‑TTC‑GAACCCCCCATACGTTGCCGTATACACACTTTTCAGGCGGGCTCCTTCAGCCCCTCGGac                                                                                     >  1:1240109/1‑149 (MQ=17)
                                                                 gCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCa                                                                               <  2:1165239/150‑1 (MQ=255)
                                                                            agaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTT‑GAACCCCCCATACGGTTCCGTATAAACACTTTTCCGGCGTGCTCCTTCCGCCCCCCCGGCACCCCCCCCAAATGtttt                                                                   >  1:452104/1‑151 (MQ=14)
                                                                             gaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTg                                                                  <  2:182157/151‑1 (MQ=255)
                                                                                  aaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCCATACGTTGCCGTATACACACTTTCCAGGCGGGCTCCTTCAGCCACTCGGACACCCCCCCCAATTGtttt                                                                   >  2:805847/1‑145 (MQ=255)
                                                                                   aTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTT‑GAACCCCCCATAAGGTGCCGTATACACACTTTCCAGGCGGGCTCCCTCCGCCACTCCGGCAACTCCCCCAATTGttttttttcc                                                             >  2:716947/1‑144 (MQ=14)
                                                                                      cGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAAc                                                         <  2:73029/151‑1 (MQ=255)
                                                                                      cGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAAc                                                         <  1:211503/151‑1 (MQ=255)
                                                                                         aaaaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GAGGGGGGGGG‑TTG‑GAACCCCC‑ACACCGTTTCGTATAAAAACCTTTCAGGCGGGGTCCCTCAGCCCACCCGACACCCCCCCCAAATGTTTTTCTTCCcaa                                                          >  1:147624/1‑147 (MQ=2)
                                                                                           aaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCAt                                                    <  1:1016073/151‑1 (MQ=255)
                                                                                           aaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCAt                                                    <  1:235618/151‑1 (MQ=255)
                                                                                                 cTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GT‑GGGGGGGG‑TTT‑GAACCCCCCATACGTTGGCGTTTAAAACCTTTTCAGGCGGGGTCCTTCAGCCCCCCCGCCACCCCCCCCAAATGTTTTTTTTCCAAACCTCATtggtgg                                              >  1:593618/1‑151 (MQ=9)
                                                                                                         ttCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGAGTTG‑GAACCCCC‑CTACGTTGTCGTATACAAACTTTCCAGGCGGGGCCCTTCAGCCACCCGGGCACCCCACCAAATTGTTTTTCTAACAAACCCCATTGGGGGGAACgggg                                      >  1:212493/1‑151 (MQ=9)
                                                                                                            gTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTC‑GAACCCCCCATACGTTGCCGGATACACACTTTTCCGGCGGGGTCCCTCAGCCACCCCGGCACCCCCCCCAAATTTTTTTCTACCCAACCTCCTTGGGGGGAAAgggggg                                    >  2:1199347/1‑148 (MQ=2)
                                                                                                            gTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGgcg                                    <  2:887417/150‑1 (MQ=255)
                                                                                                            gTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGG‑‑TTC‑GAACCCCCCATACGGTGCCGTATACACACTTTCCAGGCGGGCTCCTTCAGCCACTCGGACACCTCACCAAAATGTTTTGCTACCAAACCCCATGGGGGGCAACgggggg                                    >  2:827748/1‑147 (MQ=17)
                                                                                                              aCGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGct                                  <  2:537122/150‑1 (MQ=255)
                                                                                                                     cttcttTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTT‑GCAACCCCCCTACGTTTGCGTATAAAAACTTTTCAGGCGGGCTCCCTCAGCCCCTCGGGCACCTCCCCAAAATGTTTTTCTAACAAACCCCATGGGGGGGAACGGGGCGCTACtata                            >  1:174242/1‑149 (MQ=12)
                                                                                                                     cttcttTAAATATGGCGG‑T‑GA‑GGGGGGGG‑TTC‑GAACCCCCCATACGTTTCCGTATACACACTTTCCCGGCGGGCTCCTTCCGCCACCCGGACACCCCACCAAATTGTTTTTCTACCAAACCCCCTGGGGGGCAACGGGGCGctac                                >  2:592491/1‑145 (MQ=17)
                                                                                                                      ttcttTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTT‑GGAACCCCCCTACGTTGCAGTAGACACACTTTTCAGGCGTGCTCCTTCAACCACTCGGACACCTCACCCAAATTTTTTGCTAACCAACCTCATTGGAGGCAACGGGGCGCCACTATAggg                         >  2:563423/1‑151 (MQ=17)
                                                                                                                            aaaTATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTgg                   <  1:235172/151‑1 (MQ=255)
                                                                                                                             aaTATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGa                  <  1:942468/151‑1 (MQ=255)
                                                                                                                                   gCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTaaaa            <  2:32573/151‑1 (MQ=255)
                                                                                                                                     gg‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACg          <  2:996468/151‑1 (MQ=255)
                                                                                                                                              ggggggA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCa      >  1:1056098/1‑149 (MQ=255)
                                                                                                                                                ggggA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCaagaa  <  2:820363/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                  
TCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGG‑T‑GA‑GGGGGGGA‑TTC‑GAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAA  >  NC_000913/925755‑926046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.