Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,556,200	0	G	A	43.8%	97.1 / 42.5	80	S217F (TCC→TTC)	rtcA	RNA 3'‑terminal phosphate cyclase
Reads supporting (aligned to +/- strand):  ref base G (34/11);  new base A (0/35);  total (34/46)
Fisher's exact test for biased strand distribution p-value = 2.47e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTG  >  NC_000913/3556050‑3556347                                                                                                                                                           |                                                                                                                                                    aCCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAggg                                                                                                                                                     >  2:293753/1‑151 (MQ=255)   cAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGaa                                                                                                                                                   <  2:566251/151‑1 (MQ=255)   cAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGa                                                                                                                                                    >  1:371532/1‑150 (MQ=255)     aCTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGaaaa                                                                                                                                                 <  1:929407/151‑1 (MQ=255)        gtgCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGaaaaa                                                                                                                                                <  2:1187639/149‑1 (MQ=255)        gtgCCGCAACCACCTCGGCACTGACGCACTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGaaaaa                                                                                                                                                <  1:1150971/149‑1 (MQ=255)           ccGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTccc                                                                                                                                           >  1:934583/1‑151 (MQ=255)             gCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCg                                                                                                                                         <  2:706095/151‑1 (MQ=255)             gCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCg                                                                                                                                         <  2:1121177/151‑1 (MQ=255)               aaCCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGcc                                                                                                                                       <  2:831601/151‑1 (MQ=255)                 ccaccTCGGCACTGACGCGCTTTTCCCCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCa                                                                                                                                      <  2:607243/150‑1 (MQ=255)                  caccTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCCCTTTCGA‑CTGCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAg                                                                                                                                     <  1:143858/150‑1 (MQ=255)                   accTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGC‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAgtg                                                                                                                                   >  2:369592/1‑151 (MQ=255)                      tCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTCCCCTTTCGA‑CTACAAGCGAGACGTTATT‑CCCCGCCCCT‑GGTCCGCGCGGCAGTTTATGAATTTTCTGTTCATG‑AAGGAAAAACCCCCCCGCCAgtgt                                                                                                                                  <  1:601476/149‑1 (MQ=255)                        ggCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCg                                                                                                                              >  1:408769/1‑151 (MQ=255)                             tgccgcgTTTTCCCCCAACGAAAAAAAAGCGTTCGTTGATATTTTCTCTTCCGA‑CTTAAAGGGAGACGTTATTCCCCGGCCCCG‑GGT‑CGCGGGGCAGTTTATGAATTTTTTGTCCATG‑AAGGAAAAACCCCCCCGCCAGTGTAGCGAttt                                                                                                                          <  2:467547/147‑1 (MQ=255)                                 gcgcTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGc                                                                                                                     >  2:341959/1‑151 (MQ=255)                                  cgcTTTCCCCCGACGACAAAAAAGCGTTGGGTGATTTTTTCTCTTTCAA‑CTCAAAGCGAGACGTTATCCCCCGGCCCCG‑GGG‑CGCGCGGCAGGTTATGAATATTCTGTTCAGG‑AAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACg                                                                                                                      <  1:535500/149‑1 (MQ=255)                                      tttCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGc                                                                                                                >  1:963009/1‑151 (MQ=255)                                        tCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCa                                                                                                               >  2:175832/1‑150 (MQ=255)                                         cACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAAc                                                                                                             >  1:153168/1‑151 (MQ=255)                                           ccaaggaaaaaaaaGCTTTGGATAATTTTTTCA‑TTCCGATCTAAAACCGAGCCGGTTTTCCCCGGCCCCT‑GGC‑CGCGCGGCGGGTTATGAATTTTCTTTTCAAG‑AAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACAt                                                                                                           <  2:220876/143‑1 (MQ=255)                                           ccGACGAAAAAAAAGCGTTGGGTGATATTTCCACTTCCGC‑CTTCAAGCGAGCCGGTATTCCCCGCCCCCT‑GGT‑CGCGCGGCAGGTTATAAATTTTCTGTTCATG‑CAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACAt                                                                                                           <  2:1277152/151‑1 (MQ=255)                                              acgaaAAAAACGCGTTGGGTTATATTTTCACTTCCGC‑CTACAAGCGAGACGTTATTCCCCGCCCCCG‑GGT‑CGCGCGGGAGTTTAGAATTTTTCTGTTCATG‑GAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAg                                                                                                                 <  1:685054/142‑1 (MQ=255)                                               cgacAAAAAGGCGTTCGGTGATATTTTCCCTTTCGA‑CTTCAAGCGAGCCGTTATTCCCCGGCCCCT‑GGC‑CGCGCGGCAGGTTATAAATATTCTGTTAATG‑AAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATgg                                                                                                         <  1:735081/149‑1 (MQ=255)                                               cgacAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGgcg                                                                                                       >  1:1245582/1‑151 (MQ=255)                                               cgaaAAAAAGGCGTTGGGTGATTTTTTCCCTTGCGC‑CTTCAGGCGAGCCGGTATTCCCGGGCCCCT‑GGT‑CGCGCGGCAGTTTATAAATTTTCTTTTCATG‑CAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATg                                                                                                          <  2:864518/148‑1 (MQ=255)                                                 acAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGcgcg                                                                                                     >  1:1001630/1‑151 (MQ=255)                                                 aaaaaaaaGCGTTCGGTGATATTTTCCCTTTAGA‑CTTCAAGCGAGCGGGTATTCCCCGGCCCCT‑GGT‑GGCGCGGCAGGTTATGAATATTTTTTTCATG‑CAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACAt                                                                                                           <  2:1014921/143‑1 (MQ=255)                                                  cAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg                                                                                                    >  1:170456/1‑151 (MQ=255)                                                  aaaaaagGCGTTGGGTAATTTTTTCTTTTTCAC‑CTTCAAGCGAGACGGTATCCCCCGGCCCTG‑GGC‑CGCGGGGGGGTTTATAAATTTTTTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg                                                                                                    <  1:922692/150‑1 (MQ=255)                                                        aGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACAcc                                                                                              >  1:347770/1‑151 (MQ=255)                                                           tttCGGTTATTTTTTCGCTGTCGA‑TGTCAAGCAGGTCTTTATTCCCCGCCCCCG‑GGC‑CGCGCGGGAGTTTACAAGTTTTTTTTTCAGT‑AAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCa                                                                                             <  1:1295070/148‑1 (MQ=255)                                                            ttgggTAATTTTTCCCCTTTCGC‑CTTAAAGGGAGGGGTTATCCCCCGCCCCCG‑GGC‑CGCGCGGCGGTTTATAAATTTTCTGTTCAGG‑CGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAg                                                                                            <  2:15948/146‑1 (MQ=255)                                                               ggTTATTTTTTCACTTTCGA‑CTTCAAGCGAGACGGTATCCCCCGGCCCCT‑GGT‑CGCGCGGCAGTTTATGAATTTTCTGTTCAGG‑GAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAg                                                                                            <  1:1028668/146‑1 (MQ=255)                                                               ggTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTaa                                                                                        >  1:715523/1‑150 (MQ=255)                                                                      ttttCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACtt                                                                                >  2:1067444/1‑151 (MQ=255)                                                                       tttCTCTTGCGA‑CTCCAAGCGAGACGGTATCCCCCGGCCCCT‑GGT‑CGCGCGGCGGTTTATGAATATTCTGTTCATG‑CAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACtt                                                                                <  2:519518/150‑1 (MQ=255)                                                                        ttCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTtct                                                                              >  2:1021435/1‑151 (MQ=255)                                                                         tCACTTTCGA‑CTGCAAGCGAGACGGTATTCCCCGGCCCCT‑GTG‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTtc                                                                               <  1:407148/149‑1 (MQ=255)                                                                              ttgctacttaaacagagaCGTTATCCCCCGCCCCCG‑GGC‑CCGGCGGCGGGTTATAAATTTTCTGTCAATG‑AAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCa                                                                           <  1:271417/135‑1 (MQ=255)                                                                                    ctaaaaGCGAGACGTTATTCCCCGGCCCCG‑GGT‑CGCGCGGCAGTTTATGAATATTCTTTTCATG‑CAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt                                                                    <  2:75999/146‑1 (MQ=255)                                                                                    cTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTg                                                                   >  1:737000/1‑151 (MQ=255)                                                                                     ttaaaGCGAGACGTTTTTCCCCGGCCCCT‑GGT‑CGCGCGGCAGTTTATAAATATTCTGTTCAGG‑CGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt                                                                    <  2:1224112/146‑1 (MQ=255)                                                                                        aggCGAGACGGTATCCCCCGCCCCCG‑GGT‑CGCGCGGCGGTTTATAAATATTCTGTTCATG‑CGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt                                                                    <  2:729615/144‑1 (MQ=255)                                                                                        aaGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac                                                                >  2:616801/1‑150 (MQ=255)                                                                                          gggggaggttATTCCCCGGCCCCT‑GGT‑CGCGGGGCAGGTTATAAATTTTTTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACaa                                                              <  2:519951/141‑1 (MQ=255)                                                                                            gagaCGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGt                                                           >  2:255494/1‑151 (MQ=255)                                                                                             agaCGTTTTTCCCCGGCCCCG‑GGC‑CGCGCGGCAGGTTATGAATATTTTTTTCAGG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATg                                                            <  2:497720/149‑1 (MQ=255)                                                                                              gccgttATTCCCCGCCCCCT‑GGT‑CGCGCGGCAGGTTATAAATATTCTGTTCAGG‑CAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGtt                                                          <  2:231121/145‑1 (MQ=255)                                                                                              gaCGTTTTTCCCCGCCCCCT‑GGT‑CCCGCGTCAGGTTATAAATATTCTGTTAATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGtt                                                          <  2:873671/150‑1 (MQ=255)                                                                                              gaCGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTc                                                         >  2:274232/1‑151 (MQ=255)                                                                                                cGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTccc                                                       >  1:1221339/1‑151 (MQ=255)                                                                                                cGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTccc                                                       >  1:1065263/1‑151 (MQ=255)                                                                                                 ggTATTCCCCGCCCCCG‑GGC‑CGCGGGGCAGGTTATGAATTTTCTGTTCAGG‑AAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTc                                                         <  2:679377/148‑1 (MQ=255)                                                                                                 ggTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg                                                      >  1:1048193/1‑151 (MQ=255)                                                                                                 ggTATCCCCCGCCCCCG‑GGT‑CGCGCGGCAGTTTATAAATATTCTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg                                                      <  2:1028415/151‑1 (MQ=255)                                                                                                  gTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcgc                                                     >  2:643488/1‑151 (MQ=255)                                                                                                   tATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcgcg                                                    >  1:1089408/1‑151 (MQ=255)                                                                                                    tttcccccGCCCCTGGGT‑CGCGCGGGAGTTTATAAATATTCTTTTCATG‑CGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATg                                                            <  2:82596/139‑1 (MQ=255)                                                                                                     ttccccGGCCCCT‑GGT‑CGCGCGGCAGGTTATAAATTTTCTTTTCATG‑CAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCgcgc                                                   <  2:909693/147‑1 (MQ=255)                                                                                                     ttccccGCCCCCG‑GGT‑CGCGGGGCAGGTTATAAATTTTCTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAAt                                                             <  2:1124133/137‑1 (MQ=255)                                                                                                        cccGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGc                                               >  1:431388/1‑151 (MQ=255)                                                                                                         ccGCCCCGT‑GGT‑CGCGCGGCGGGTTATGAATTTTCTGTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGcc                                              <  1:1176528/151‑1 (MQ=255)                                                                                                            cccccG‑GGT‑CGGGCGGGAGGTTATGAATATTCTGTACAGG‑AAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAg                                           <  2:434579/150‑1 (MQ=255)                                                                                                                       cgcgcgGCAGTTTATGAATTTTCTTTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCaa                                     <  1:582702/148‑1 (MQ=255)                                                                                                                         cgcgGCAGGTTATGAATATTCTTTTCATG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAgg                                   <  2:483193/148‑1 (MQ=255)                                                                                                                         cgcgGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGgtgt                                >  2:1000569/1‑151 (MQ=255)                                                                                                                               aGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACg                          >  2:363913/1‑151 (MQ=255)                                                                                                                                ggTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACg                          >  1:1039536/1‑150 (MQ=255)                                                                                                                                  ttATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATg                       >  2:360235/1‑151 (MQ=255)                                                                                                                                    aTGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACCATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGcc                     >  1:34295/1‑151 (MQ=255)                                                                                                                                       aaTATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACg                  >  1:575987/1‑151 (MQ=255)                                                                                                                                       aaTATTCTGTCCATG‑CGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACGTGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACg                  <  1:251724/151‑1 (MQ=255)                                                                                                                                        atatTCT‑TTCAAGCCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCa                    <  1:848525/148‑1 (MQ=255)                                                                                                                                              tgtaaaTG‑CAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGc               <  2:686957/142‑1 (MQ=255)                                                                                                                                              tGTTCAGG‑AAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCgag            <  2:1541/150‑1 (MQ=255)                                                                                                                                                  cATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTc       >  2:94152/1‑151 (MQ=255)                                                                                                                                                       cAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGCGTTAAACGATGCCACGGGCGAGACTTCCGtt   >  2:360415/1‑151 (MQ=255)                                                                                                                                                        aGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTg  >  1:746887/1‑151 (MQ=255)                                                                                                                                                        aGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACGCCAGCTAATAGAACTTCTCCACGCAGCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCg     <  1:138426/148‑1 (MQ=255)                                                                                                                                                           |                                                                                                                                                    ACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGA‑CTTCAAGCGAGACGGTATTACCCGGCCCCT‑GGT‑CGCGCGGCAGGTTATGAATATTCTGTTCATG‑CAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTG  >  NC_000913/3556050‑3556347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑