Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,755,687 IS5 (–) +4 bp intergenic (‑546/‑8) ydhZ ← / → pykF uncharacterized protein/pyruvate kinase I

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)68 (0.870) 54/296 0.7 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 1755690 0 (0.000)intergenic (‑549/‑8) ydhZ/pykF uncharacterized protein/pyruvate kinase I
* ? NC_000913 1755687 =0 (0.000)73 (0.930) 66/298 0.3 100% intergenic (‑546/‑11) ydhZ/pykF uncharacterized protein/pyruvate kinase I
?NC_000913 = 2102943 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 143 total aligned reads displayed.

GGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCA  >  NC_000913/1755540‑1755840
                                                                                                                                                      |                                                                                                                                                      
gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTaa                                                                                                                                                        >  2:30632‑M1/148‑151 (MQ=255)
     agaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAgga                                                                                                                                                     <  2:49923‑M2/149‑4 (MQ=255)
     agaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAgga                                                                                                                                                     <  2:944948‑M2/149‑4 (MQ=255)
         acaAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgc                                                                                                                                               >  1:181768‑M2/1‑142 (MQ=255)
           atctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATg                                                                                                                                              <  1:1084897‑M1/14‑1 (MQ=255)
           aaGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcg                                                                                                                                              <  2:1009852‑M2/150‑11 (MQ=255)
               cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGa                                                                                                                                             >  2:1144056‑M1/133‑147 (MQ=255)
               cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGa                                                                                                                                             >  1:821642‑M1/133‑147 (MQ=255)
               acacaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaata                                                                                                                                          <  1:320066‑M2/150‑15 (MQ=255)
                ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGaaaa                                                                                                                                          <  2:873711‑M1/18‑1 (MQ=255)
                 acaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagc                                                                                                                                       <  2:1022637‑M2/151‑18 (MQ=255)
                  ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGAc                                                                                                                                      <  2:1165728‑M1/22‑1 (MQ=255)
                      ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCaa                                                                                                                                   >  2:671264‑M1/126‑150 (MQ=255)
                      ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCa                                                                                                                                    >  2:1141422‑M1/126‑149 (MQ=255)
                      ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCa                                                                                                                                    >  1:83590‑M1/126‑149 (MQ=255)
                      ccTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcgggga                                                                                                                                  >  2:1056622‑M2/1‑129 (MQ=255)
                       ctctGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcgggg                                                                                                                                   <  2:1036473‑M2/149‑22 (MQ=255)
                        tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAAt                                                                                                                                <  1:962696‑M1/28‑1 (MQ=255)
                          tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTg                                                                                                                              <  1:112966‑M1/30‑1 (MQ=255)
                           gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGt                                                                                                                             >  1:208172‑M1/121‑151 (MQ=255)
                               gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGc                                                                                                                         <  1:389943‑M1/35‑1 (MQ=255)
                                cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                        <  2:109436‑M2/151‑33 (MQ=255)
                                 tttttCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcg                                                                                                                       <  2:924477‑M2/151‑34 (MQ=255)
                                 gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAc                                                                                                                       <  1:237275‑M1/37‑1 (MQ=255)
                                  cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAcc                                                                                                                      <  2:606243‑M1/38‑1 (MQ=255)
                                     actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCAt                                                                                                                    >  2:193382‑M1/111‑150 (MQ=255)
                                      cGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   >  1:1150887‑M2/1‑113 (MQ=255)
                                       tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCgg                                                                                                                 <  1:386430‑M1/43‑1 (MQ=255)
                                       gATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 >  2:985965‑M2/1‑112 (MQ=255)
                                       gATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 <  2:875552‑M2/151‑40 (MQ=255)
                                        gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCg                                                                                                                  >  1:358700‑M1/108‑149 (MQ=255)
                                        aTGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                                >  1:1168583‑M2/1‑111 (MQ=255)
                                          gTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               >  1:528083‑M2/1‑109 (MQ=255)
                                           tCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               <  2:713990‑M2/149‑42 (MQ=255)
                                           gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGAcc                                                                                                              >  1:38067‑M1/105‑150 (MQ=255)
                                           gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGAc                                                                                                               >  2:1226496‑M1/105‑149 (MQ=255)
                                                tATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        <  1:259586‑M2/151‑49 (MQ=255)
                                                 aTCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                       >  1:659570‑M2/1‑102 (MQ=255)
                                                    gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcgccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCggaccgaaccacga                                                                                                     >  2:259180‑M1/96‑144 (MQ=255)
                                                      tAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                    >  2:604228‑M2/1‑97 (MQ=255)
                                                      cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATc                                                                                                  <  1:367053‑M1/58‑1 (MQ=255)
                                                      cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATc                                                                                                  >  1:912534‑M1/94‑151 (MQ=255)
                                                       ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCt                                                                                                 <  1:513120‑M1/59‑1 (MQ=255)
                                                          gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGa                                                                                               <  1:134959‑M1/61‑1 (MQ=255)
                                                             ggtaagttgatgactcatgatgaaccctgttctatggctccagatgtcaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAagag                                                                                           >  2:405319‑M1/87‑151 (MQ=255)
                                                              ggCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                          >  2:3442‑M2/1‑89 (MQ=255)
                                                                aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGAt                                                                                         >  1:899143‑M1/84‑150 (MQ=255)
                                                                aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGAt                                                                                         >  1:1166831‑M1/84‑150 (MQ=255)
                                                                  ccaccacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                                      >  1:672169‑M2/1‑85 (MQ=255)
                                                                        gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTa                                                                                 <  1:697830‑M1/75‑1 (MQ=255)
                                                                        cTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                                 >  2:869271‑M2/1‑79 (MQ=255)
                                                                           tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAAt                                                                             <  2:239675‑M1/79‑1 (MQ=255)
                                                                            catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATg                                                                            >  1:855682‑M1/72‑151 (MQ=255)
                                                                            cGTAATACCGGATTCGCTTTCCGGCAGTGCGCCAAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             >  1:890030‑M2/1‑75 (MQ=255)
                                                                             atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGc                                                                           >  2:945444‑M1/71‑151 (MQ=255)
                                                                               aaTACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                          >  2:291135‑M2/1‑72 (MQ=255)
                                                                                atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTgg                                                                        >  2:1199602‑M1/68‑151 (MQ=255)
                                                                                 tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTgg                                                                        <  1:501803‑M1/84‑1 (MQ=255)
                                                                                   aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACg                                                                     >  1:1084886‑M1/65‑151 (MQ=255)
                                                                                     ggATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                                   >  2:497532‑M2/1‑66 (MQ=255)
                                                                                     ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCt                                                                   <  2:997130‑M1/89‑1 (MQ=255)
                                                                                     ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCt                                                                   <  1:850529‑M1/89‑1 (MQ=255)
                                                                                                ggctccagatgccaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGt                                                        >  1:850820‑M1/52‑151 (MQ=255)
                                                                                                ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGt                                                        <  1:417375‑M1/100‑1 (MQ=255)
                                                                                                    cAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                                    >  1:434002‑M2/1‑51 (MQ=255)
                                                                                                     aGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                                   >  2:693319‑M2/1‑50 (MQ=255)
                                                                                                       tGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                                 <  1:773435‑M2/151‑104 (MQ=255)
                                                                                                         tgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCt                                               <  1:585088‑M1/109‑1 (MQ=255)
                                                                                                          gcCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                              <  1:1138214‑M2/151‑107 (MQ=255)
                                                                                                           cccAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             >  2:214292‑M2/1‑44 (MQ=255)
                                                                                                           cccAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             <  1:3697‑M2/151‑108 (MQ=255)
                                                                                                            caaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGa                                             <  2:929988‑M1/111‑1 (MQ=255)
                                                                                                             aaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAAc                                           <  1:67377‑M1/113‑1 (MQ=255)
                                                                                                                   gCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                     >  1:952186‑M2/1‑36 (MQ=255)
                                                                                                                      aGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                                  >  2:590356‑M2/1‑33 (MQ=255)
                                                                                                                       tcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATg                                 <  1:392822‑M1/123‑1 (MQ=255)
                                                                                                                       gtgtCTGCCATCCTTCTCAACTTAAAGACTAAggaaggtgagaataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcggattttttctcccgtaaatgtcttgaatgagcctatttagaccgtgtatt                                 <  2:705480‑M2/151‑120 (MQ=255)
                                                                                                                        catatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCAt                                  >  2:21484‑M1/28‑149 (MQ=255)
                                                                                                                         ttCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg                               <  1:349584‑M2/151‑122 (MQ=255)
                                                                                                                           atcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGa                             >  1:1078304‑M1/25‑151 (MQ=255)
                                                                                                                               gggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTAt                         >  1:115185‑M1/21‑151 (MQ=255)
                                                                                                                               cATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                            >  1:462893‑M2/1‑24 (MQ=255)
                                                                                                                                aTCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        >  1:1222005‑M2/1‑23 (MQ=255)
                                                                                                                                  acttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGc                       <  2:519241‑M1/133‑1 (MQ=255)
                                                                                                                                     tgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGa                    >  2:665533‑M1/15‑150 (MQ=255)
                                                                                                                                      gttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAac                  <  2:588027‑M1/138‑1 (MQ=255)
                                                                                                                                      gttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAac                  >  2:1075957‑M1/14‑151 (MQ=255)
                                                                                                                                        cAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta                >  1:388112‑M2/1‑15 (MQ=255)
                                                                                                                                         cgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACg               <  2:1150560‑M1/141‑1 (MQ=255)
                                                                                                                                         aaCTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat               >  2:557110‑M2/1‑14 (MQ=255)
                                                                                                                                             tAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           <  2:277198‑M2/151‑142 (MQ=255)
                                                                                                                                                 ccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAgcgc       <  2:597247‑M1/149‑1 (MQ=255)
                                                                                                                                                    taagactGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCAtt    >  1:119021/1‑151 (MQ=255)
                                                                                                                                                    taagactGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCAtt    >  2:427422/1‑151 (MQ=255)
                                                                                                                                                    tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:524647‑M2/151‑149 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   >  1:447945‑M2/1‑2 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:548089‑M2/1‑2 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:320992‑M2/150‑149 (MQ=255)
                                                                                                                                                      aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  2:1081045‑M2/149‑149 (MQ=255)
                                                                                                                                                      agactGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCa  <  2:631582/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCA  >  NC_000913/1755540‑1755840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.