| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,443,277 | 0 | A | C | 41.4% | 159.9 / 31.0 | 87 | V274G (GTA→GGA) | secY | preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (48/3); new base C (0/36); total (48/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAAT > NC_000913/3443129‑3443423 | aGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTAcc > 1:968307/1‑151 (MQ=255) aCGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTAcccc > 2:711805/1‑151 (MQ=255) cGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTAccccc < 2:240994/151‑1 (MQ=255) agagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCat > 2:264886/1‑151 (MQ=255) agTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCatat > 1:381378/1‑151 (MQ=255) gTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTCCCCCCGCCatat < 1:308646/150‑1 (MQ=255) gTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATAtt > 1:50699/1‑151 (MQ=255) gTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATAtt > 1:70633/1‑151 (MQ=255) acaTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAGTAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACtt > 2:10009/1‑151 (MQ=255) acaTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACtt > 2:402641/1‑151 (MQ=255) aTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTc > 1:682032/1‑151 (MQ=255) aaaggCGGTGCCCCAGGCTAAAAATACAGCAAATTTGTTGTCCGCCAGTCCCAC‑CCAGTCCCC‑CCCCCAAACCAGGCCGCGTGGGTCGCCGGAAAC‑AAAAAAATACTGGAAGCGAAG‑ATGGCGGGGATTCCCCCCGCCATATTCACTTTCa < 2:324661/147‑1 (MQ=255) aGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCg > 1:621697/1‑151 (MQ=255) ccccGGGCTAAAAATACAGAGAATTTTTTGCCACCCATTCCCAA‑CAAGCCCCC‑CCCCCAAACCAGGCGGCGGGGGCCGCGGGAAAA‑AAAATAATAGGGGAAGAAAAA‑ATGGGGGGTATTCCCCCCGCCATATTCACTTTCAGCGGTaaa < 2:629282/148‑1 (MQ=255) cccagccgcaaaaCACAGCAAATTTGTTGCCCCCCTTTCCCAC‑CCAGTCCCC‑CCCCCAACCCATGACGCGTTGGCCCCCGGAAAA‑AAAAAAATACGGGAAGAGAAA‑ATGGCGGGTATTCCCCCCGCCATATTCACTTTCAGCGGTaaa < 2:689816/138‑1 (MQ=255) ccaggtaacAAATACAGCAAATTTGTTGTCAGCAATTTCAAC‑CAAGTCCCC‑CCCCCAAACCAGGACGCGAGGGTCGCGGGAAAA‑AAATTAATACGGGAAGCGAAG‑ATGGCGGGAATTACCCCCGCCATATTCACTTTCAGCGGTAAAtgtg < 1:1132552/143‑1 (MQ=255) aaaaaaagggAATTTTTTGCCAGCCATTCCCAC‑CCAGTCCCG‑CCCCCAACCCAGGACGCGATGGTCGCGGGGAAA‑AAAATAATTCTGGAAGTAAAA‑ATTGCGGGGATACCCCCCGCCATATTCACTTTCAGCGGTAAAtgtgt < 2:1139167/134‑1 (MQ=255) agaaaatttgttgCCAGCCAGTCCCAA‑CCAGTCCCG‑CCCCCGAACCATGACGCGATGGTCGCCGGAAAC‑AAAAAAATACTGGAAGCGAAG‑TTGGCCGGTATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcagc < 1:639000/142‑1 (MQ=255) gAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt > 1:1219557/1‑148 (MQ=255) aattttttgtCAGCCAGTCCCAA‑CCAGTCCCC‑CCCCCGAACCATGCCGCGATGGTCGCGGGAAAC‑AAAATAATACGGGAAGCGAAG‑ATTGCGGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGa < 1:1115125/144‑1 (MQ=255) attttttgtcgCCCGTTCCAA‑CCCGGCCCCCCCCCCGAACCATGACGCGATGGTCGCGGGGAAA‑AAAATAATAGGGGAGGCGAAG‑AGGGCGGGATTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGac < 2:70651/140‑1 (MQ=255) aTTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGacac > 1:453155/1‑151 (MQ=255) ttgttgccgCCCGTTCCAACCCGGTCCCC‑CCCCCAACCCAGGACGGGTGGGTCGCGGGAAAA‑AAAAAAATAGTGGAAGGAAAG‑ATTGCGGGGTTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcagca < 2:1116620/135‑1 (MQ=255) ttgcCAGCCAGTCCCAC‑CAAGTCCCC‑CCCCCGAACCATGACGCGTTGGTCGCGGGAAAA‑AAAATAATCCTGAAAGCGAAG‑ATTGCGGGGATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacgac < 1:300387/150‑1 (MQ=255) ccgcccAGTCCCAC‑CCATCCCCC‑CCCCCGAACCAGGACGGGATGGTCGCGGGAAAA‑AAAATAATACTGGAAGCGAAG‑TTTGCGGGGTTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACAcgacga < 2:195581/145‑1 (MQ=255) cAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCt > 1:953475/1‑151 (MQ=255) aGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCtt > 1:921520/1‑151 (MQ=255) ccAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGc > 1:676255/1‑151 (MQ=255) ccAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGc > 2:48110/1‑151 (MQ=255) aGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTg > 1:339714/1‑151 (MQ=255) aGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTg > 1:1007399/1‑151 (MQ=255) aGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACACCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTg > 1:374124/1‑151 (MQ=255) attaccaacagtcaCCC‑CCCCCCACCCATGTCGCGAGGGTC‑CCGGGAACAAGAAAAATCCGGGAGGCAAAT‑TTGGCGGGTATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCt < 2:106535/137‑1 (MQ=255) ccAA‑CCAGCCCCG‑CCCCAAACGCGTGACGCGATGGCCGCGGGAAAC‑AAAAAAATGCGGGAAGCAAGG‑ATTGCGGGGTTTCCCGCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTg < 1:189968/144‑1 (MQ=255) caagccagccccG‑CCCCCGCACCGGGGCGCAAGGGGCGCGAGGAGA‑AGAAAAATAATGG‑AGGGAAGTTTTGCTGGAATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGAc < 1:636251/139‑1 (MQ=255) a‑CCAGTCCCC‑CCCCAGAACAATGCCGCATGGGTCGCAGGAAAC‑AGAAAAATATTGGAAGGGAAG‑ATTGCCGGATTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTc < 2:978050/151‑1 (MQ=255) ccagccccG‑CCCCCAACCCATGCCGGGATGGTCGCGGGAAAA‑AAAATAATACTGGAAGCAAAG‑ATTGCCGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTc < 1:310729/144‑1 (MQ=255) ccAGTCCCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGAGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTc < 2:1076250/150‑1 (MQ=255) ccAGTCCCC‑CCCCAGACCCATGAGGGGATGGTCGCGGGAAAA‑AAAATAAAACTGGAAGCGAAA‑ATTGCGGGATTTCCCCCCGCCATATTCACTTTCAGCTGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTc < 2:639731/150‑1 (MQ=255) cAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTcgc > 1:715737/1‑151 (MQ=255) tACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGt > 1:876779/1‑150 (MQ=255) cccccccccAAACCATGGCGGGAGGGTCCCCGGAAAC‑AAAAAAATACTGGAAGAAAAG‑TTGGCGGGTATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTa < 2:936377/146‑1 (MQ=255) ccGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTAcc > 2:113097/1‑150 (MQ=255) aaCCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcaca > 2:848027/1‑150 (MQ=255) aaCCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcaca > 1:1088517/1‑150 (MQ=255) cgcgATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGt > 1:1063001/1‑151 (MQ=255) gggATGGTCGCGGGAAAA‑AAAAAAATACTGGAAGGGAAG‑ATTGCGGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgc < 1:109003/143‑1 (MQ=255) gcgATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGtt > 1:7078/1‑151 (MQ=255) gtgggTCGCGGGAAAC‑AAAAAAATACGGAAAGCGAAG‑TTGGCCGGGTTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGtt < 1:1102229/146‑1 (MQ=255) gATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTg > 1:647701/1‑150 (MQ=255) tGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGAcc > 1:410816/1‑151 (MQ=255) tGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGAcc > 2:106725/1‑151 (MQ=255) ggTCGCGGGAAAC‑AAAATAATACGGGAAGCAAAG‑ATTGCGGGATTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCa < 1:3540/151‑1 (MQ=255) gcgggaaaaaaaaaaataCGGAAAGCGAAG‑TTTGCCGGGTTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTg < 2:192921/129‑1 (MQ=255) ggaaaC‑AAAATAATACGGGAAGCGAAG‑TTTGCCGGTATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCAc < 2:333946/142‑1 (MQ=255) ggaaaaaaaataatACTGGAAGCAAAG‑ATTGCCGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTc < 1:855599/141‑1 (MQ=255) c‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 1:787222/1‑151 (MQ=255) c‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 1:1151665/1‑151 (MQ=255) c‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 1:851935/1‑151 (MQ=255) ataataatACGTGAAGCAAAG‑ATTGCCGGCATGCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa < 2:47715/149‑1 (MQ=255) aaaataatACTGGAAGCAAAG‑TTTGCCGGAATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt < 2:403823/148‑1 (MQ=255) aaaaaattccTGGAAGCGAAG‑ATGGCGGGGATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca < 2:234500/138‑1 (MQ=255) aGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 2:613931/1‑150 (MQ=255) aataatACGGGAAGCGAAG‑ATTGCGGGGATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATaca < 2:1062983/151‑1 (MQ=255) ataataCTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATaca > 1:497114/1‑150 (MQ=255) atgccggaaaGCGAAG‑ATGGCCAGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaaca < 1:653557/143‑1 (MQ=255) aataCTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaac > 2:31604/1‑150 (MQ=255) ggAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAAc > 1:400689/1‑151 (MQ=255) ggAAGAGAAG‑ATTGCGGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGaa < 1:1057665/150‑1 (MQ=255) gaaaGCGAAG‑ATTGCGGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAAc < 2:42890/149‑1 (MQ=255) aaGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGt > 2:24307/1‑151 (MQ=255) aaGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGt > 2:371638/1‑151 (MQ=255) aaGCAAAG‑ATTGCCGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGt < 1:192599/151‑1 (MQ=255) aaGAGATG‑ATTGCCGGGTTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGaa < 2:371549/148‑1 (MQ=255) gCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTc > 2:1127973/1‑150 (MQ=255) gCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTc > 2:620793/1‑150 (MQ=255) cGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCAc > 1:523824/1‑151 (MQ=255) cGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCAc > 1:1169251/1‑151 (MQ=255) gAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCAc > 2:1148671/1‑150 (MQ=255) aaG‑ATTGCCGGGATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACt < 1:465475/150‑1 (MQ=255) aG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGc > 2:819330/1‑151 (MQ=255) aG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGc > 1:152030/1‑151 (MQ=255) g‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGc > 2:742544/1‑150 (MQ=255) gCCGGGTTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCaa < 2:319238/148‑1 (MQ=255) gggATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatact > 1:313157/1‑150 (MQ=255) ggATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaa < 2:1031240/151‑1 (MQ=255) aTTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaat > 1:687809/1‑150 (MQ=255) | AGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCAGCCAGTTCCAA‑CCAGTACCG‑CCCCCGAACCATGACGCGATGGTCGCCGGGAAC‑AGAATAATACTGGAAGCGAAG‑ATTGCCGGGATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAAT > NC_000913/3443129‑3443423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |