Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,755,687 IS5 (–) +4 bp intergenic (‑546/‑8) ydhZ ← / → pykF uncharacterized protein/pyruvate kinase I

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)73 (0.860) 63/296 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 1755690 0 (0.000)intergenic (‑549/‑8) ydhZ/pykF uncharacterized protein/pyruvate kinase I
* ? NC_000913 1755687 =0 (0.000)70 (0.820) 65/298 0.5 100% intergenic (‑546/‑11) ydhZ/pykF uncharacterized protein/pyruvate kinase I
?NC_000913 = 2102943 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 144 total aligned reads displayed.

TTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCA  >  NC_000913/1755537‑1755836
                                                                                                                                                      |                                                                                                                                                     
ttGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagac                                                                                                                                                       >  2:587835/1‑151 (MQ=255)
 tGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagact                                                                                                                                                      >  2:1030096/1‑151 (MQ=255)
    gCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta                                                                                                                                                     >  2:1317873/1‑149 (MQ=255)
       gagaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAgga                                                                                                                                                 >  1:343101‑M2/1‑147 (MQ=255)
       caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACt                                                                                                                                                <  1:964749‑M1/8‑1 (MQ=255)
        agaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaag                                                                                                                                               >  1:559153‑M2/1‑146 (MQ=255)
        aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTg                                                                                                                                               >  1:1016462‑M1/143‑151 (MQ=255)
        aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTg                                                                                                                                               <  2:514189‑M1/9‑1 (MQ=255)
        aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTg                                                                                                                                               >  2:420118‑M1/143‑151 (MQ=255)
           aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTc                                                                                                                                             <  1:563885‑M1/11‑1 (MQ=255)
             caAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcg                                                                                                                                          >  2:1287211‑M2/1‑141 (MQ=255)
                 cacacaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaata                                                                                                                                      >  1:294324‑M2/1‑137 (MQ=255)
                    tttctggtctgacggcgcttactgctgaattcactgtcggcgacggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatccgggacttgttcgcaccttccCTAAGACTGTCATGaaa                                                                                                                                       <  1:1245334‑M1/17‑1 (MQ=255)
                      tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGAcc                                                                                                                                 <  2:610199‑M1/23‑1 (MQ=255)
                         ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCaa                                                                                                                               <  2:532157‑M1/25‑1 (MQ=255)
                         ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCa                                                                                                                                >  2:205721‑M1/126‑149 (MQ=255)
                         ccTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcgggga                                                                                                                              >  1:1332697‑M2/1‑129 (MQ=255)
                          ctctGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcgggga                                                                                                                              <  1:1010692‑M2/150‑23 (MQ=255)
                           tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAAt                                                                                                                            <  2:762236‑M1/28‑1 (MQ=255)
                              gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAAtt                                                                                                                           >  1:805858‑M1/121‑149 (MQ=255)
                               cACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattc                                                                                                                         >  1:465806‑M2/1‑123 (MQ=255)
                               acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGtt                                                                                                                        >  1:643540‑M1/120‑151 (MQ=255)
                                   cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                    <  2:869301‑M2/151‑33 (MQ=255)
                                     cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAcc                                                                                                                  <  2:16902‑M1/38‑1 (MQ=255)
                                      tttCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                  >  2:976164‑M2/1‑116 (MQ=255)
                                         ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATc                                                                                                               <  1:1229417‑M1/41‑1 (MQ=255)
                                         ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCg                                                                                                              <  1:329955‑M1/42‑1 (MQ=255)
                                         cGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                              >  2:150764‑M2/1‑113 (MQ=255)
                                         cGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                              >  2:469937‑M2/1‑113 (MQ=255)
                                          gctgtCACCTCTCCTTAGAGCGAAGCACCACCACTTTCGCAATACCGGATTCGCTTTCCGGCAGAGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaatttcttctcggctga                                                                                                              <  1:483328‑M2/148‑39 (MQ=255)
                                           gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCgg                                                                                                             >  1:70707‑M1/108‑150 (MQ=255)
                                             gTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                           <  2:1077146‑M2/150‑42 (MQ=255)
                                              gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGAc                                                                                                           >  1:178497‑M1/105‑149 (MQ=255)
                                              gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCg                                                                                                         <  2:1271633‑M1/47‑1 (MQ=255)
                                               cACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                        >  2:628490‑M2/1‑107 (MQ=255)
                                                attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGaa                                                                                                       >  1:431614‑M1/103‑151 (MQ=255)
                                                aCCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                       >  2:1153052‑M2/1‑106 (MQ=255)
                                                 ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGaa                                                                                                       <  1:635572‑M1/49‑1 (MQ=255)
                                                    aTCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                   >  2:1181820‑M2/1‑102 (MQ=255)
                                                     tCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                  <  2:823891‑M2/151‑51 (MQ=255)
                                                         tAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                                >  1:1234576‑M2/1‑97 (MQ=255)
                                                           gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTg                                                                                            >  2:732883‑M1/92‑151 (MQ=255)
                                                           gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTg                                                                                            >  2:314042‑M1/92‑151 (MQ=255)
                                                               gAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                        >  2:946811‑M2/1‑91 (MQ=255)
                                                               aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGa                                                                                           <  1:513460‑M1/61‑1 (MQ=255)
                                                                   caccaccacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                    >  2:1129304‑M2/1‑87 (MQ=255)
                                                                     gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGtt                                                                                  >  2:858749‑M1/82‑151 (MQ=255)
                                                                      ttgatgactcatgatgaaccctgttctatggctccagctgacaaacatgacctcatatcagggacttgttcgcaccttccCTCAGACTGTCCTGAAACAGACCAAAATTGTTTGCACCACCGGACCGAAAACCGAATCTGAAGAGATGtt                                                                                  <  1:1304205‑M1/70‑1 (MQ=255)
                                                                      caccacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                 >  2:482194‑M2/1‑84 (MQ=255)
                                                                       accacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                <  2:863845‑M2/151‑69 (MQ=255)
                                                                         cacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                              >  1:1018173‑M2/1‑81 (MQ=255)
                                                                          tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCt                                                                              <  2:875044‑M1/74‑1 (MQ=255)
                                                                           gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTaa                                                                            >  2:643033‑M1/76‑151 (MQ=255)
                                                                               catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATg                                                                        >  1:250558‑M1/72‑151 (MQ=255)
                                                                                atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGc                                                                       >  1:948643‑M1/71‑151 (MQ=255)
                                                                                     gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGAc                                                                  <  2:22631‑M1/86‑1 (MQ=255)
                                                                                       cGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                <  2:93343‑M2/151‑85 (MQ=255)
                                                                                             cGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                          <  2:708132‑M2/151‑91 (MQ=255)
                                                                                              gCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                         <  2:168468‑M2/151‑92 (MQ=255)
                                                                                                 ttCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                      <  1:755248‑M2/151‑95 (MQ=255)
                                                                                                 ttCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                        >  1:691764‑M2/1‑57 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGaa                                                       >  1:1176444‑M1/54‑150 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGa                                                        >  1:76541‑M1/54‑149 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAAc                                                      >  1:199960‑M1/54‑151 (MQ=255)
                                                                                                 atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAAc                                                      <  2:1031950‑M1/98‑1 (MQ=255)
                                                                                                   ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGt                                                    >  2:1180263‑M1/52‑151 (MQ=255)
                                                                                                      tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGCCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTa                                                  <  1:1106307‑M1/102‑1 (MQ=255)
                                                                                                       ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATg                                                <  1:304255‑M1/104‑1 (MQ=255)
                                                                                                              cccAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                         >  1:1113374‑M2/1‑44 (MQ=255)
                                                                                                              acaaacatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGa                                         >  1:1310609‑M1/41‑151 (MQ=255)
                                                                                                                cAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                       >  2:521012‑M2/1‑42 (MQ=255)
                                                                                                                  acatgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACtt                                     <  2:44284‑M1/115‑1 (MQ=255)
                                                                                                                   catgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTtc                                    >  1:737331‑M1/36‑151 (MQ=255)
                                                                                                                     tgatctcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTtctc                                  <  1:440220‑M1/118‑1 (MQ=255)
                                                                                                                      gCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                 >  1:941476‑M2/1‑36 (MQ=255)
                                                                                                                        aaGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                               >  1:620722‑M2/1‑34 (MQ=255)
                                                                                                                        aaGTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                               <  1:1172484‑M2/151‑118 (MQ=255)
                                                                                                                          tcatatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATg                             <  2:197280‑M1/123‑1 (MQ=255)
                                                                                                                          gTTTCTCCCATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                             >  1:642111‑M2/1‑32 (MQ=255)
                                                                                                                           catatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCAt                              >  1:826583‑M1/28‑149 (MQ=255)
                                                                                                                            atatcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGt                           <  2:1004841‑M1/125‑1 (MQ=255)
                                                                                                                              atcagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTg                          >  2:723735‑M1/25‑150 (MQ=255)
                                                                                                                                cccATCCTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                         >  2:606459‑M2/1‑26 (MQ=255)
                                                                                                                                cagggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACt                       <  2:1232720‑M1/129‑1 (MQ=255)
                                                                                                                                  gggacttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTAt                     <  1:966102‑M1/131‑1 (MQ=255)
                                                                                                                                     ccTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                   >  1:807576‑M2/1‑21 (MQ=255)
                                                                                                                                     ccTTCTCAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                    <  2:986346‑M2/149‑129 (MQ=255)
                                                                                                                                       ttgttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGc                   <  1:830305‑M1/133‑1 (MQ=255)
                                                                                                                                         gttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAac              >  1:722523‑M1/14‑151 (MQ=255)
                                                                                                                                          ttcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAac              <  1:400667‑M1/138‑1 (MQ=255)
                                                                                                                                           tcgcaccttccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAacac            <  1:423543‑M1/140‑1 (MQ=255)
                                                                                                                                           cAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta            >  2:1311023‑M2/1‑15 (MQ=255)
                                                                                                                                           cAACTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt             >  2:1109955‑M2/1‑15 (MQ=255)
                                                                                                                                             aCTTAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc          >  2:1231029‑M2/1‑13 (MQ=255)
                                                                                                                                               ttAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc        <  2:1182434‑M2/151‑141 (MQ=255)
                                                                                                                                                tAAAGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc         >  1:621715‑M2/1‑10 (MQ=255)
                                                                                                                                                 aaaGACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc       <  2:646530‑M2/150‑142 (MQ=255)
                                                                                                                                                   tccCTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAgc     >  2:415431‑M1/4‑150 (MQ=255)
                                                                                                                                                    gACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt   <  1:1336754‑M2/151‑146 (MQ=255)
                                                                                                                                                     aCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt  >  1:816839‑M2/1‑5 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCA  >  NC_000913/1755537‑1755836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.