| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,640,981 | 0 | C | T | 44.2% | 94.1 / 50.0 | 86 | F40F (TTC→TTT) | dtpB | dipeptide and tripeptide permease B |
| Reads supporting (aligned to +/- strand): ref base C (4/44); new base T (38/0); total (42/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-20 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGATGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTG > NC_000913/3640837‑3641131 | ggATGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGtt < 2:906484/151‑1 (MQ=255) gATGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGG‑TTttct > 1:833206/1‑146 (MQ=255) aTGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTaa < 1:394264/151‑1 (MQ=255) tGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTaa > 2:554686/1‑150 (MQ=255) ggTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAAc < 2:994335/151‑1 (MQ=255) ggTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAAc < 1:781056/151‑1 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACa < 1:1050064/151‑1 (MQ=255) aaGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTCCTTAACAGCtttg > 1:352697/1‑148 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGTATGCGGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGAtt < 1:919956/151‑1 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGAtt < 2:1223265/151‑1 (MQ=255) taataaATATGAATACAACAACACCCATGGGGATGCTGCAGAAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCTTTTAACaaccttggtttt > 1:290288/1‑139 (MQ=255) aaataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAACAACCTGGGTTCTCGc > 1:535166/1‑149 (MQ=255) aaataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCaa < 2:717567/151‑1 (MQ=255) tGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTTTTAAACAACCTTGGTTTTCCCAag‑ag > 2:554936/1‑149 (MQ=255) aaTACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑gg < 2:590162/151‑1 (MQ=255) aTACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAACAACTTGGATTTTCGCAAG‑AGCa > 1:55515/1‑148 (MQ=255) aTACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAAAAGCTTGGGTTCTCCCCAG‑AGCA‑gg > 2:1151304/1‑150 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGGGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAACAGCCTTGGTTCTCGCAAG‑AGGA‑GGGttt > 1:157676/1‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAAAAACTTGGGTTTTTCCCAG‑AGCG‑GGCgtt > 1:1276439/1‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTAAAAAGCTTGGGTTTTCGCAAG‑AGCA‑GGCttt > 2:42046/1‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAACTTGGGTTTTCGCCAA‑AGCA‑gggctt > 2:1155749/1‑147 (MQ=255) aacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTAAACAGCTTTGGTTTTCGCAAA‑AGGC‑GGGtttt > 2:569864/1‑151 (MQ=255) caacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAAAAGCTTTGATTTTCCCCAA‑AGCA‑GGCtttt > 2:1272087/1‑149 (MQ=255) aacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTAAAAAGCTTGGGTTTTCGGAAA‑AGCA‑GGGtttt > 2:435078/1‑148 (MQ=255) cacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCAc < 2:1241246/151‑1 (MQ=255) acCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACt < 2:1280186/151‑1 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCCTTAAAAAACTTGGGTTCTCGCAAG‑AGCA‑GGGTTTTTTCACtt > 1:389837/1‑151 (MQ=255) ccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGCTTTTTTTCTTTAAA‑AGCCTTGGTTTTTGCAAG‑AGGA‑GGCtttttttacctt > 2:862386/1‑143 (MQ=255) ccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACttt < 2:939180/151‑1 (MQ=255) ggATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGc < 1:381447/151‑1 (MQ=255) aTGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTAAAAAGCTTGGGTTTTCGCCAG‑AGGA‑GGGCTTTGTCCCtttttggggtt > 2:1343577/1‑144 (MQ=255) gctgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAGCTTTGATTCTCCCAAA‑AGCA‑AGCTTTTTTTCCTTTTTGTGGtttt > 2:965062/1‑151 (MQ=255) gctgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCtttt < 2:666613/151‑1 (MQ=255) tgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAACAACTTGGGTTTTCCCAAG‑AGGA‑GGGTTTTGTCACTTTTTGTGGtttt > 2:659023/1‑149 (MQ=255) gcagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTtg < 2:412119/149‑1 (MQ=255) aaCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCt < 1:924848/151‑1 (MQ=255) aCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAACAAGTTGGGTTCCCGCCAA‑GGCAGGGCTTTTGTTCTTTTTGTGGCttttt > 1:1166009/1‑143 (MQ=255) aCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAAAAACTTTGGTTCTCGCCAG‑AGCA‑GGGTTTTGTCACTTTTTGTGGtttt > 1:990019/1‑142 (MQ=255) aCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑ATTTTTTTGTTTAAAAAAATGGGTTCTCGCAAA‑AAGA‑GGCGTTTTTCACTTTTTGTGGTTTTGTTgcg > 1:1057703/1‑148 (MQ=255) ccTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAAAAGCTTGGGTTTTCGCAAG‑AGCA‑GGGTTTTTTTCCTTTTTGTGGTTTTTTTTCGCTgg > 1:894096/1‑151 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAACAACCTTGATTTTCCCCAA‑AGGA‑GGCTTTTTTTTCCTTTTGTGGCTTTTCTGCGCttg > 1:1156394/1‑147 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTCTTTAACAGCTTGGGTTTTCGCAAG‑AGGA‑GGCTTTTTTTACTTTTTGGGTTTTTTTTGCGCTgg > 2:1342700/1‑148 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGt < 1:498356/149‑1 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 1:749607/150‑1 (MQ=255) cGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTCGTTTAAAAACTTGGGTTCTCTCAAG‑AGCA‑GGCCTTTGTTACCTTTTGTGCTTTTTTTGTGCTgg > 1:184989/1‑148 (MQ=255) gCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑Ta < 2:1285176/151‑1 (MQ=255) ccATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATg < 1:259736/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTCTTTAAAAGCTTGGGTTTTTGCAAA‑AACA‑GGGTTTTGTCATTTTTGTTGGTTTTTCTGTGCTGGTC‑TAAgg > 1:942702/1‑151 (MQ=255) aTTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTAAAAAGCTTGGGTTTTTGCAAA‑AGGC‑GGGTCTTTTTTCTTTTGGTGCCTTTTCTTCCGTGGTC‑ttttg > 1:30095/1‑146 (MQ=255) tttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTTGTTTAACAGCCTTGATTTTCAGAAGAAGAA‑GGC‑TTTGTCACTTTTGGTGCTTTTTCTGGGCTGGTC‑TAttggct > 2:864968/1‑145 (MQ=255) tttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAGCTTGGGTTTTCGCAAA‑AGGA‑GGCTTTTTTCACTTTTTGTGGTTTTTCTGCGCTGGGG‑TATGGcc > 2:893208/1‑149 (MQ=255) cATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAGCTTGGGTTCTCGCAAG‑AGCA‑GGCTTTTTTCACTTTTTGGGCTTTTTCTGCGCTGGGC‑TATTGGCTCAtt > 2:973501/1‑151 (MQ=255) aTGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCAttt < 1:951215/151‑1 (MQ=255) cTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCTTTAAAAAACATTGATTTTCGCAAG‑AGCA‑GGCTTTTTTTACTTTTGGTGGTTTTTCTGCGCTGGGC‑TCTGTCCCCATTTTCAtt > 2:918049/1‑151 (MQ=255) cTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTTAACAGCTTGGGTTTTCGCCAA‑AGGA‑GGCTTTTTTTACTTTTTGGGCTTTTTTTGCGCTTGTC‑TATTGCCTCCTTTCCCtt > 2:676792/1‑151 (MQ=255) tttttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCAt < 1:1284978/148‑1 (MQ=255) tttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAACAGCTTGGGTTCTCCCAAG‑AGGA‑GGCCTTTGTTACTTTTGGGTCTTTTTCTGCGCTGGTC‑TATGGCCCCAttttcctttg > 2:622604/1‑142 (MQ=255) gTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCt < 2:1304783/151‑1 (MQ=255) gTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAAAAGCTTTGATTCTCGCCAA‑AGGA‑GGCTTTTTTCCCTTTTTGTGCTTTTTTTGCGGCGGGC‑TATTGCCTCATTTTCCTTtgcgg > 1:409694/1‑149 (MQ=255) cGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGG‑TTTTTTTCTTTAAACA‑CTTGGGTTTTCCCCAA‑AACA‑GGCTTTTTTTACCTTTTGTGGTTTTTCCTCGCCGGGCTTTTGGCCCCTTTTCCTTTggcg > 1:944080/1‑147 (MQ=255) cGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTa < 2:1211156/150‑1 (MQ=255) cGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTTGTTTAAAAACTTTGATTTTCGCAAG‑AGCA‑GGGTTTTGTCACTTTTTGTGGTTTTTGTGCGCTGGTC‑TATTGCCCCATTTTCCTTggggg > 1:1023701/1‑147 (MQ=255) cGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑GTTTTTTCGTTTAACAGCTTGGGTTTTCGCAAG‑AGGA‑GGCTTTTGTCACTTTTTGTGCTTTTGCTGCGGGGGGC‑TATTGGCTCATTTCCCtttgggggtct > 2:907885/1‑142 (MQ=255) gAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATg < 2:315678/151‑1 (MQ=255) gTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTc < 1:967199/151‑1 (MQ=255) aTGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGc < 1:1327058/151‑1 (MQ=255) aGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGacca < 2:894225/151‑1 (MQ=255) aTTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGGGACCACctg < 1:356892/151‑1 (MQ=255) aTTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACctg < 1:1211110/151‑1 (MQ=255) cGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACctgct < 1:470707/150‑1 (MQ=255) tactacGGCGTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTTACAACTTGGGTTTTCGCAAG‑AGCA‑GGCTTTTTTCTCTTTTTGTGGTTTTTCTTCGCTTGGC‑TATTGGCTCATTTCCATTGGGGGCTTTTTTGGCGGCCCCCTCCTggg > 1:125172/1‑149 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGAc < 1:18594/151‑1 (MQ=255) ggCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAAc < 2:942027/151‑1 (MQ=255) ggCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAAc < 1:538768/151‑1 (MQ=255) ggCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAAc < 2:1308625/151‑1 (MQ=255) gCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACg < 2:1341994/151‑1 (MQ=255) gTGCAGGGCGTACTGGC‑GG‑TTTTTTTCGTTTAAAAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTTTCACTTTTGGTGCTTTTTCTGCGCTGGGC‑TATGGCCTCATTTTCATTTGCGGGTATTTTGGGGACCACCTGCTGGGGGCCaaa > 2:166684/1‑147 (MQ=255) tGCAGGACGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCAGTGGCGGCTATGTCGGGGACCACCTGCTAGGGACCAAACGCa < 1:111824/150‑1 (MQ=255) gCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCAcc < 2:328885/151‑1 (MQ=255) aGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCAt < 2:1052994/151‑1 (MQ=255) aCTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCtt < 2:399783/151‑1 (MQ=255) cTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCtt > 2:940090/1‑150 (MQ=255) tGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTgg > 2:758991/1‑151 (MQ=255) ggC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTgg < 1:1286682/150‑1 (MQ=255) ggC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTgg < 1:441276/150‑1 (MQ=255) gC‑GT‑TTTTCTTCTTTAGACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCTCTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGCCCACCACCTGCTGGGGATCAAACGCACCATTGTTCTTg < 1:730998/148‑1 (MQ=255) ttttCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCAc < 1:207930/150‑1 (MQ=255) ttcttcGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACtt < 1:48194/150‑1 (MQ=255) tcttcGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCCTTGTTCTTGGAGCACTtgt > 1:303669/1‑151 (MQ=255) tcttcGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTtg < 1:397215/150‑1 (MQ=255) tcttcGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTtg > 1:91900/1‑150 (MQ=255) cttcGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTtgtg > 1:321479/1‑151 (MQ=255) | GGATGGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GG‑TTTTCTTCGTTAAACAGCTTGGATTCTCGCAAG‑AGCA‑GGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTC‑TATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTG > NC_000913/3640837‑3641131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |