| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 75,079 | 0 | C | T | 41.1% | 94.6 / 45.3 | 73 | L134L (CTG→CTA) | thiB | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (4/39); new base T (30/0); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGG > NC_000913/74937‑75226 | cTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGttt > 2:536301/1‑148 (MQ=255) gtgGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTggtttt > 2:385505/1‑146 (MQ=255) tgGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTGTtttt > 1:317056/1‑150 (MQ=255) ggggTGTCATGGCCGTGGACTTTTCGCACCCATAGCAACAGACCCACCCCCGGTGTACTGGTGCGCGAATCCTGATAAATCGCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGt < 1:69523/151‑1 (MQ=255) gggCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTc < 1:838085/151‑1 (MQ=255) gTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATaa < 2:73309/151‑1 (MQ=255) gTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTGTTTTTGtttt > 2:139457/1‑146 (MQ=255) cATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAAc < 1:737450/151‑1 (MQ=255) cATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAAc < 1:1000676/151‑1 (MQ=255) cGCCATAGCCTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGaa < 2:112384/151‑1 (MQ=255) cGCCATAGACTTTTTGCATCCATAGCAACAGCCCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGaa < 2:275482/151‑1 (MQ=255) cGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTCCTGGTGCGCGAATCCTGATAAATCGCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACg < 2:826180/149‑1 (MQ=255) ccATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAgg < 1:590080/151‑1 (MQ=255) cATAGACTTTTTGCATCCATAGCAACAGACACAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTCAAATTTTTCtttttgttaaaaaagg > 1:427683/1‑136 (MQ=255) ccATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑a < 2:1038979/151‑1 (MQ=255) aTAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTTTTTTTTTTATAAAAGAAGGCGAAGGAGCCATAATC‑aa > 1:902584/1‑150 (MQ=255) aGCAACAGCCCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAAc < 2:1023265/150‑1 (MQ=255) cAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTTTTTTTTTTCTCAACAAAAGAGAAGCAGCCATAAAC‑AAAAgg > 2:125281/1‑150 (MQ=255) aCAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTGTTTTTGTCATAAAAAAAAGCGAAGGAGCCATAATC‑aaa > 1:1018061/1‑145 (MQ=255) aCAGACCCACCCCCGGTGTCCTGGTGCGCGGATCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGt < 2:730035/149‑1 (MQ=255) cAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTTTTTTTTTTTTAAACAAAAGCGGAGGAGCCAAAAAC‑AAAAgg > 2:571545/1‑147 (MQ=255) aGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTTATTTTTTTTTTTCATAAAAAAAGGGGAAGGAACCACAATC‑aaa > 2:1065760/1‑143 (MQ=255) aGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTAGTTTTTTTTTGTTTTAAACAAAGGGGAAGGAGCCCTAAAC‑AAAAGGTACg > 2:1124873/1‑150 (MQ=255) cccACCCCCGGTGTACTGTGGCGCGGAGCCTGATAAATTCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAg < 2:413275/151‑1 (MQ=255) acccccGGTGTCCTGGTGCGCGGATCCTGATAAATCGCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAgt < 1:300398/147‑1 (MQ=255) gCCCCGGTTTTCTGGTTCCGGTATCTTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAgtgt < 2:856892/150‑1 (MQ=255) cccgGGTGTAGTGGGGCGCGATTCTTCATAAAGCTCCCGCCAGTTTTAATCGCTCTCAGCCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCAGAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCa < 2:953720/151‑1 (MQ=255) cGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTATTTTTTTTTTTTTTTAAAAAAAGGCGGAGGAGGCATAATT‑AAAAAGGACGaaaaagttctt > 2:495835/1‑142 (MQ=255) ggTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTAGTTTTTTTTTTTTATAAAAGAAAGCGAAGGAACCCTAATA‑AAACAGGAAGAAAGAGTGatt > 1:24030/1‑149 (MQ=255) ggTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCatta‑t < 1:945630/151‑1 (MQ=255) ggTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTCTTTTTTTTTTTCATAAAAAAAAGGGAAGAAGCCAAAATC‑CAAAGGTACGacaaagttatt > 2:1102781/1‑139 (MQ=255) tgtACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCatta‑tt < 1:625515/150‑1 (MQ=255) tACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTTTTTTTTTTTTTAAAAAAAGCGGAAGAGCCATAAAC‑AAAAAGGAAGAAAGGGTCatta‑tttc > 2:1127986/1‑148 (MQ=255) tACTGGTGCGCGGACCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTcc < 1:46274/150‑1 (MQ=255) aCTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTAGTTTTTTTTTTTCATAAACGAAGGGGGAGAAGCCCAAAAC‑AAAAGGGGCGaaaaaggtattatt > 1:1106227/1‑136 (MQ=255) aCTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTATTTTTTTCTTTTCTTAAAAGAAGGGGGAGTAGCCCAAATC‑AAAAGGTGAGaaaaaggtattatt > 1:377444/1‑136 (MQ=255) ggggcgcGGATCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAgc < 2:845962/146‑1 (MQ=255) ggTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAgccg < 2:72708/151‑1 (MQ=255) gcgcGGATCCTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAgccgcc < 2:931874/150‑1 (MQ=255) gcgcGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAgccgcc < 2:423990/150‑1 (MQ=255) gATCCTGAAAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAc < 2:549933/151‑1 (MQ=255) tCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTTTTTTTTTTTTTCATAAAAGAAGGCGAAGGAGCCATAATT‑AAACGGGACGAAAGTGTCATTT‑TTTCAACCGCCcgg > 1:373444/1‑146 (MQ=255) ccTGATAAATCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑Gtt < 2:317014/151‑1 (MQ=255) aaaTCCCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTa < 1:281729/146‑1 (MQ=255) aaaTCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTTTTTTTGTCTTAAACGAAAGCGAAAAAACCCTAAAT‑AAAAAGTAAGAAAAAGTCATTA‑TTTTAGCCCCCGGGGAC‑ggt > 2:1046374/1‑143 (MQ=255) tCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTTTTTTTTTCATAAAAGAAAGGGAAGGAGCCATAATA‑AAAAGGGGCGAAAGAGTCATTA‑TTTCAGCCGCCGGGGAC‑GGTTACgg > 1:1124444/1‑147 (MQ=255) cccccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATcc < 1:747635/149‑1 (MQ=255) cACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATcc < 2:448468/151‑1 (MQ=255) cACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATcc < 1:345280/151‑1 (MQ=255) aCCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTCGTTTTTTTTTTTCTTAAACGAAGGGGAAGGAACGCCAAAC‑AAACAGGAAGAAATTGTCAATATTTCTACCCCCCGGGAA‑‑GCTAACgg > 2:361013/1‑145 (MQ=255) cccGCCATTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTGCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGc < 2:426413/151‑1 (MQ=255) ccGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTTTTTTTTTTCTAAAAAAAGGGGAAGGAACCATAAAC‑AAAAAGGACGAAAAAGTCATTA‑TTTCACCCGCCCGGGAA‑GCTAAAGGGATcc > 1:883951/1‑148 (MQ=255) gCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTAGTTTTTTCTTTTTATTAAAGAAGGCGAAGGAGGCCTAATT‑AAACAGTACGAAAGAGTGATTA‑TTTCAGCCGCCCGGGAC‑GGTAACGGCAAcc > 2:547492/1‑146 (MQ=255) gCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTGTTTTTGTTTTAAACGAAAGCGAAGTAGCCATAATC‑AAACGGGACGAAAGTGTCATTA‑TTTCAGCCGCCGGGGAA‑GGTTACGGCATcccccgc > 1:62986/1‑146 (MQ=255) ccAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGcc < 1:505736/151‑1 (MQ=255) cAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCca < 1:926438/151‑1 (MQ=255) ttGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGCGGGGTTTTTTAGTTT‑TTTTTTTTATAAAAAAACGGGGAGGAGACATAAAT‑AAAAAGGACGAAAGAGGCTTTA‑TTTCAGCCGGCGCGGAA‑GGTAAAGGCCTCCgccgcccc > 1:618641/1‑145 (MQ=255) tGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTTGTTTTTTTTTTTCATAAAAAAAGGCGGAGTAGCCCTAATC‑AAACGGGACGAAAGAGTCATTT‑TTTCTTCCCCCCGGGAG‑ATTAAAGGCATCCGCCGCCCCAcccc > 1:1121339/1‑149 (MQ=255) gATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGc < 2:1132160/150‑1 (MQ=255) aTCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTTTTTTTTTTTTAAAAGAAGGCGGAGGAGCCATAAAA‑AAAAAGGGCGGAAAGGTTATTA‑TTTCCGCCGCCGGGGACGGTTAAAGG‑ATCCGCTGccccccccc > 1:894073/1‑142 (MQ=255) tCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTTTTTTTTTTATAAAAAAAAGGGGAGGAGGCATAATT‑AAAACGGACGGAAGGGGCATTA‑TTTCAACCGCCCGGGAA‑GTTAAAGGCCTccccccccccccccc > 2:130889/1‑135 (MQ=255) gCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTAGTTTTTTCTTTTTCTAAAAAAAGGAGAAGGAGGCATAATT‑AAAAGGTACGGAAGAGTTATTA‑TTTCTGCCGCCGGGGAA‑GGTAACCGCCTCCCCCGCCCCACCCCcttt > 2:63128/1‑150 (MQ=255) ctctCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGGTTTTTTGTTTGTTTTTTTTATAAAAAAAAGGGGAGAAGGCATAATT‑AAACGGGACGGAAGAGGCATTA‑TTTCAACCGCCGGGGAA‑GGTAAAGGCATCCGCTGCCACCCCCCcttt > 2:818235/1‑149 (MQ=255) tctcAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTTTGTTTTTTTTTTTTATAAACGAAAGCGGAGGAGCCCTAATCAAAACGGT‑CGGAAGGGTCCTTT‑ATTCAGCCCCCGGGGAA‑GGTAACGGCATCCGCCGCCACACCCCtttt > 2:201495/1‑148 (MQ=255) cAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATGATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGc < 1:537213/148‑1 (MQ=255) ttCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTcc < 2:948300/150‑1 (MQ=255) cAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGtttt < 2:993414/150‑1 (MQ=255) aGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTAc < 2:502938/151‑1 (MQ=255) ggCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACt < 2:645848/151‑1 (MQ=255) gggTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCt > 1:634949/1‑150 (MQ=255) ttttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAAc > 1:103269/1‑149 (MQ=255) ttttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACa < 1:489604/150‑1 (MQ=255) tttCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCAGCGTCTAACAgg > 1:50194/1‑151 (MQ=255) | CTTGTGGGGCGTCATCGCCATAGACTTTTTGCATCCATAGCAACAGACCCAGCCCCGGTGTACTGGTGCGCGGATCCTGATAAATCACCCGCCAGTTTTGATCGCTCTCAACCAGTTCTTTCAGGCTTTGTGGC‑GGGTTTTTCAGTTTGTTCTTGTCATAAACGAAGGCGAAGTAGCCATAATC‑AAACGGTACGAAAGTGTCATTA‑TTCCAGCCGCCGGGAAC‑GTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGG > NC_000913/74937‑75226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |