Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,097,5810AG40.4% 195.3 / 32.6 109noncoding (72/88 nt)serXtRNA‑Ser
Reads supporting (aligned to +/- strand):  ref base A (11/54);  new base G (44/0);  total (55/54)
Fisher's exact test for biased strand distribution p-value = 2.18e-20
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 111 total aligned reads displayed.

GCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAA  >  NC_000913/1097440‑1097731
                                                                                                                                              |                                                                                                                                                         
gCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAAccc                                                                                                                                                  >  1:1487732/1‑151 (MQ=17)
  gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAAccccc                                                                                                                                                >  2:1585403/1‑151 (MQ=18)
    tCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCg                                                                                                                                               <  2:711583/150‑1 (MQ=37)
     cACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GGGGGGGGGGTTCGGAccccc                                                                                                                                                >  1:912563/1‑148 (MQ=16)
           cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGA‑GAGGGGGGGGTTTGATcccccccctc                                                                                                                                           >  1:30443/1‑142 (MQ=11)
             gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTg                                                                                                                                       <  1:1122198/149‑1 (MQ=255)
             gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGc                                                                                                                                      <  1:1843856/150‑1 (MQ=255)
             gTCCAACTGGCTGTCGCCACTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGcc                                                                                                                                     <  1:1774333/151‑1 (MQ=255)
               ccAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCg                                                                                                                                    <  1:1486321/150‑1 (MQ=255)
               ccAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCg                                                                                                                                    <  1:1904994/150‑1 (MQ=255)
                   cTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTCAAccccccctaccttttc                                                                                                                                     >  1:1629601/1‑134 (MQ=11)
                   cTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTCGAACCCCCGATACGTTTCCGta‑t                                                                                                                                >  2:314702/1‑149 (MQ=255)
                       cTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTCGGACCCCCCCTACGttttcgcctacac                                                                                                                             >  1:57321/1‑138 (MQ=11)
                         gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑Ctt                                                                                                                       <  2:1200971/151‑1 (MQ=255)
                           cGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAAACCCCCATACGTTGCCGTA‑TACAAA‑Cttt                                                                                                                      >  2:1563954/1‑150 (MQ=255)
                            gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAACCCCCCCTACGTTGCCGTA‑TACACA‑CTTTcc                                                                                                                    >  2:879941/1‑151 (MQ=255)
                            gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTCTACCCCCCCTACCGTTCCCTA‑TACACA‑Cctt                                                                                                                      >  1:459822/1‑149 (MQ=11)
                                 ttGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTTTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGc                                                                                                                <  1:91628/150‑1 (MQ=255)
                                   gTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTg                                                                                                             <  1:1417964/151‑1 (MQ=255)
                                    tCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCCATACGTTTCCGTA‑TACACA‑CTTTCCAGGCg                                                                                                               >  2:366559/1‑148 (MQ=255)
                                      gAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAAACCCCCATACGTTGCCGTA‑TACACACCTTTCCA‑GCGTGCt                                                                                                           >  1:436699/1‑150 (MQ=17)
                                      gAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAAACCCCCATAAGTTGCCGTA‑TACACA‑Cttttccgg                                                                                                                 >  2:122225/1‑139 (MQ=17)
                                       aaCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGGAACCCCCATACGGTTCCGTATTACACC‑CTTTCCggggtggccc                                                                                                          >  1:901317/1‑144 (MQ=11)
                                        aCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTCGAAACCCCCCTACGTTTCCCTA‑TAAACA‑CTTTCCCGGGGGGCTcc                                                                                                         >  1:779243/1‑150 (MQ=14)
                                          cccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTTGAACCCCCGATACGTTGTCGTA‑TACACA‑CCTTCCAGGCGGGCTCCtt                                                                                                       >  1:1781837/1‑150 (MQ=17)
                                            cGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGC‑GAGGGGGGGGGTCGAAACCCCGCTACGTTGCCGTA‑TACAAA‑CTTTCCCGGCGTGCTcc                                                                                                         >  1:252944/1‑146 (MQ=17)
                                             ggTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GGGGGGGGGGGTTGAACCCCCCATACGTTGCCGTA‑TACACA‑CTTTCCAAGCGTGCTCCTTCCGc                                                                                                   >  2:1386696/1‑151 (MQ=18)
                                             ggTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAAACCCCCATACGTTTCCCTA‑TACACA‑CTTTTCAGGCGGGCTcc                                                                                                         >  2:1536383/1‑145 (MQ=17)
                                                  gggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTc                                                                                              <  2:700338/151‑1 (MQ=255)
                                                       tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGGAACCCCCCTAAGTTGCCGTA‑TACACA‑CCTTTCCGGGGGGGTCCTTCAGCCCCTCgg                                                                                            >  2:1276256/1‑148 (MQ=14)
                                                       tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAACCCCCCCCACGTTTCCGTA‑TAAACA‑CTTTTCCGGCGTGCTCCTTCCGCCAccccg                                                                                            >  1:1076353/1‑144 (MQ=17)
                                                         tcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCCATACTTTTCCGTA‑TACACA‑CTTTTCCCGCGTGCTCCCTCAGCCACTCCGACA‑cc                                                                                      >  1:718846/1‑151 (MQ=17)
                                                             ccccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAACCCCCCATACCTTTCCGGT‑TACACA‑CTTTCCCAGCGGGCCCCTTCATCCACCCCGGCA‑ccccc                                                                                   >  1:1606179/1‑147 (MQ=14)
                                                             ccccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCAc                                                                                  <  1:1369243/151‑1 (MQ=255)
                                                                 ccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCGCTACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACCCGGACA‑CCTCACCa                                                                                >  2:1217566/1‑149 (MQ=255)
                                                                    gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTg                                                                           <  2:1594648/151‑1 (MQ=255)
                                                                      gtgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGt                                                                          <  2:1595676/150‑1 (MQ=255)
                                                                       tgtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTc                                                                         <  1:1794692/150‑1 (MQ=255)
                                                                        gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCg                                                                        <  2:1512252/150‑1 (MQ=255)
                                                                         tgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGGAACCCCCCTACGTTGCCGTA‑TAAACA‑CCTTCCCGGCGTGCTCCCTCCGCCACCCGGACA‑CCTCACCCAAATGTCGtt                                                                      >  2:440554/1‑151 (MQ=14)
                                                                         tgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGt                                                                       <  1:1311704/150‑1 (MQ=255)
                                                                          gCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGtt                                                                      <  2:120586/150‑1 (MQ=255)
                                                                            aaTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCt                                                                   <  2:1468758/151‑1 (MQ=255)
                                                                              tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCGATACGTTTCCGTA‑TAAACA‑CTTTCCAGGCGTGGTCCTTCAGCCCCCCCGACA‑CCTCCCCAAATTTTTGtttc                                                                    >  1:1628672/1‑146 (MQ=11)
                                                                              tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTCGAAACCCCCATACGATGCCCGA‑TACACA‑CCTTCCAGGCGGGGTCCTTCAGCCCCTCCGACA‑CCCCACCCAATTGTCGtt                                                                      >  2:1790569/1‑146 (MQ=14)
                                                                               ataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCCATACGTTGCCGTA‑TACACA‑CTTTCCCGGCGGGCTCCCTCAGCCACCCCGACA‑CCCCACCCAATTGTCGTTCCTGt                                                                 >  2:172777/1‑150 (MQ=14)
                                                                                taCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGA‑GAGGGGGGGGTTCGGACCCCCCAAACATTGCCGTA‑TACACA‑AATTCCCGGGGGGCTCCCTCATCCACTCGGAAA‑CCCCACCAAATTTTCGTTCCTGTCt                                                               >  2:547738/1‑151 (MQ=14)
                                                                                  cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTCAACCCCCGATACGTTGGCGTA‑TACACA‑CTTTTCAAGCGGGGCCCTTCCGCCACCCCGGCA‑ACCCACCAAATTTTTGtttccctctt                                                              >  2:1739498/1‑142 (MQ=2)
                                                                                  cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCtt                                                              <  1:506892/150‑1 (MQ=255)
                                                                                  cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTg                                                             <  1:1496289/151‑1 (MQ=255)
                                                                                   gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCCATACGTTTCCGTA‑TACAAA‑CTTTTCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTTGTTTCTGtttt                                                              >  2:1177287/1‑149 (MQ=11)
                                                                                    aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGCTACGTTGCCGTA‑TACACC‑CTTTTCCGGCGGGCTCCTTTAGCCACCCCGACA‑CCCCACCCAAATTTTGGTCCTGTCtt                                                              >  2:121302/1‑148 (MQ=11)
                                                                                     aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAACCCCCCACACGTTTTCGTA‑TAAACA‑CCTTTCCGGCGTGGTCCTTCTCCCACCCCGGCACCCCCCCCAAATTTTGGTT‑CTGTCtt                                                              >  1:355532/1‑147 (MQ=2)
                                                                                      aaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTgg                                                         <  1:93288/151‑1 (MQ=255)
                                                                                       aaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGa                                                        <  1:1255710/151‑1 (MQ=255)
                                                                                         aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCTCCAAATTGCCGTTCCTGTCTTGCTGGAAc                                                      <  1:1596570/151‑1 (MQ=255)
                                                                                            gCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGAGGGGGGGATT‑GAAACCCCCAAATGCACCCGGA‑GAAACA‑ATTTCCAGGCGAGCTTCCTCCGCAACTCCGGGG‑CCACACCAAATTGTTGATACTGTCTTGCTGGaa                                                       >  2:383079/1‑147 (MQ=9)
                                                                                            gCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTTGAACCCCCCATACGTTGCCGGA‑TACACA‑CCTTTCACGCGCGGCCCTTCAGCCACCCGGACC‑CCCCACCAAATTTTTGGTCCTGTCTTGCTTGTACggg                                                   >  2:559087/1‑151 (MQ=14)
                                                                                              ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGgcg                                                 <  1:482975/151‑1 (MQ=255)
                                                                                              ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTCGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGgcg                                                 <  1:54222/151‑1 (MQ=255)
                                                                                                  aCTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTaa                                             <  1:646877/151‑1 (MQ=255)
                                                                                                     ttCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAAtt                                           <  2:1670311/150‑1 (MQ=255)
                                                                                                     ttCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAAt                                            <  2:527538/149‑1 (MQ=255)
                                                                                                       cGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAg                                        <  2:806507/151‑1 (MQ=255)
                                                                                                        gTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTTGAACCCCCGCTACCTTTCCGTA‑TACACA‑CTTTTCCGGGGGGGTCCTTCCGCCACCCGGGCA‑CCTCACCAAAATTTCGTTTCTGTCTTTCTGGGACCGGCGCCAAtttttg                                       >  1:391354/1‑148 (MQ=9)
                                                                                                         tACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTGGAAACCCCGCTACGGTTGCGTA‑TAAAAA‑CATTTCAGGCGGGGTCCCTCAGCCCCCCGGACA‑CCCCCCCAAAATTTTGTTTCTGTCTTTTTGGGAAGGGCGGCAATTTAagg                                      >  1:42913/1‑151 (MQ=2)
                                                                                                          aCGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAggg                                      <  2:543432/150‑1 (MQ=255)
                                                                                                            gAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGaaa                                   <  1:755295/151‑1 (MQ=255)
                                                                                                             aGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGGTCGAACCCCCCGTACGTTGCCGTA‑TACACA‑CCTTTCAGGCGGGCTCCCTCAGCCCCACGGACA‑CCTCACCAAAATGTCGTTCCTGTCTTTCTGGAACGGGCGCTAAATTATGGaaa                                   >  2:845500/1‑150 (MQ=17)
                                                                                                             aGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCCCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAAt                                  <  2:690223/151‑1 (MQ=255)
                                                                                                              gCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCCATACGTTGCCGTA‑TACACA‑CTTTCCCGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCCAAATTTCGTTTCCGTCTTTCTGGGACGGGCGCCAAtttttgggaa                                   >  2:1902687/1‑142 (MQ=14)
                                                                                                              gCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATc                                 <  2:1833040/151‑1 (MQ=255)
                                                                                                                  ttcttTAAATATGGCGGG‑GAGGGGGGGGTTCGAAACCCCGCTACGTTTCCCTA‑TAAACA‑ATTTCCAGGCGTGCTCCTTCAGCCACCCGGGCA‑CCTCACCCAAATTTCGTTTCTGTCTTTCTGGGAAAGGCGCTAATTTTGGGgaa                                   >  1:1587439/1‑145 (MQ=9)
                                                                                                                   tcttTAAATATGGCGGT‑GAGGGGGGGGTTCGAACCCCCGCTACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTTTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGGAATCATGAc                            >  2:391638/1‑151 (MQ=255)
                                                                                                                   tcttTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCAt                               <  1:944392/148‑1 (MQ=255)
                                                                                                                    cttTAAATATGGCGGT‑GAGGGGGGGGTTTGGACCCCCGCTACGTTTGCGTA‑TACACA‑CTTTTCCGGCGGGCTCCTTCAGCCACCCGGGCA‑CCCCCCCCAAATTTCGGTCCTTTCTTTCTGGGACGGGCGCCAATTTTGGGGAATCATGAcc                           >  2:310140/1‑151 (MQ=9)
                                                                                                                      ttAAATATGGCGGT‑GAGGGGGGGGTTCGCAACCCCCCTACGCGGGCGCA‑TTCACA‑CATTACAGGAGTGCGCCTTCCCACACACGGCCA‑CCCCACCCCATTGTTGCTCCCTTCTTTCTGGGAGGGGCGCGAACTTAGGGAAATcccaacc                           >  1:419571/1‑143 (MQ=9)
                                                                                                                      ttAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCt                          <  1:252260/150‑1 (MQ=255)
                                                                                                                        aaaTATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAg                       <  2:1308213/151‑1 (MQ=255)
                                                                                                                         aaTATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAgg                      <  2:1018964/151‑1 (MQ=255)
                                                                                                                          atatGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGt                     <  2:912587/151‑1 (MQ=255)
                                                                                                                          atatGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGt                     <  1:1155363/151‑1 (MQ=255)
                                                                                                                           tatGGCGGG‑GGGGGGGGGGTTCGAACCCCCCATACGTTGCCGTA‑TACACA‑CTTTTCCGGCGGGCTCCTTCAGCCACCCGGGCA‑CCTCACCAAATTTTCGTTCCTGTCTTGCTGGGACGGGCGCTAATTTAGGGGAATCATGACCTTAgg                      >  1:321725/1‑149 (MQ=18)
                                                                                                                            atGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTca                   <  2:458461/151‑1 (MQ=255)
                                                                                                                            atGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTc                    <  2:836362/150‑1 (MQ=255)
                                                                                                                                cGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTcaaca                >  1:731207/1‑150 (MQ=255)
                                                                                                                                 ggT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTcaacaa               >  1:219827/1‑150 (MQ=255)
                                                                                                                                 ggT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTcaacaa               >  1:589720/1‑150 (MQ=255)
                                                                                                                                     gAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACtt           <  2:824934/151‑1 (MQ=255)
                                                                                                                                       gggggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACtttt         <  1:1509796/151‑1 (MQ=255)
                                                                                                                                       gggggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACtttt         >  1:87068/1‑151 (MQ=255)
                                                                                                                                        ggggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACttttt        >  1:1849604/1‑151 (MQ=255)
                                                                                                                                         gggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTg       <  2:1025886/151‑1 (MQ=255)
                                                                                                                                         gggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTg       >  1:636725/1‑151 (MQ=255)
                                                                                                                                          ggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTg       >  2:302864/1‑150 (MQ=255)
                                                                                                                                          ggggATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGa      <  1:775128/151‑1 (MQ=255)
                                                                                                                                             gATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaa   <  2:1461992/151‑1 (MQ=255)
                                                                                                                                             gATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaa    >  1:895612/1‑150 (MQ=255)
                                                                                                                                              aTTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaa  <  1:77191/151‑1 (MQ=255)
                                                                                                                                              aTTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGaaaaa  <  2:1297721/151‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                         
GCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT‑GAGGGGGGGATTCGAACCCCCGATACGTTGCCGTA‑TACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACA‑CCTCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAA  >  NC_000913/1097440‑1097731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑