Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4960TA42.0% 148.9 / 54.6 100intergenic (+301/‑155)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base T (52/6);  new base A (0/42);  total (52/48)
Fisher's exact test for biased strand distribution p-value = 4.34e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGG  >  NC_000913/29346‑29642
                                                                                                                                                          |                                                                                                                                                  
tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAatat                                                                                                                                                    >  2:1268095/1‑151 (MQ=255)
tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAatat                                                                                                                                                    >  2:1737003/1‑151 (MQ=255)
 ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAatat                                                                                                                                                    <  2:554087/150‑1 (MQ=255)
 ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAatat                                                                                                                                                    <  1:485592/150‑1 (MQ=255)
   aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATaa                                                                                                                                                  >  1:1310663/1‑150 (MQ=255)
   aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATaa                                                                                                                                                  >  1:791527/1‑150 (MQ=255)
    aTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATaaaa                                                                                                                                                <  2:1829064/151‑1 (MQ=255)
    aTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATaaa                                                                                                                                                 >  2:389785/1‑150 (MQ=255)
                 ccATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCAtt                                                                                                                                    >  1:496213/1‑150 (MQ=255)
                   aTTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTa                                                                                                                                   >  2:1456269/1‑149 (MQ=255)
                      tGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTg                                                                                                                              >  2:809815/1‑151 (MQ=255)
                          ccttttttttCTGCTCTTTTTTATTTCATGCAATCTTCTTGCTGCGCAGGCTTTTTCC‑AGAACAGGTT‑AGATGATTTTTTTGTCGCTTAATGCCTGAAAAAAA‑TGCA‑GGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTg                                                                                                                              <  2:1551837/143‑1 (MQ=255)
                            aCTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                        >  2:1885720/1‑151 (MQ=255)
                               tttttCTGCTCTTTTTTTTTTCATGAAATCTTCTTGCTGCGAAGGTTTTTCCC‑AAAACGGTTT‑AGATTATTTTTTTGTCGTTTAATGCTTAAAAAACA‑TACA‑GGGCCAAAAAAAAAATAAAAAAACTCCCGCCATTAAGTTGACTTTTAg                                                                                                                      <  2:1246162/150‑1 (MQ=255)
                                ttttCTGCTCTTTTTTATTTCATGCATTCTTCTTGCTGCGAAAGCTTTTTCA‑AAAACAGGTT‑AGATGATTTTTTTGTCGTTTAATGCCTAAAAAACA‑TGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAgc                                                                                                                     <  1:1411772/150‑1 (MQ=255)
                                ttttCTGCTCGTTTTTTTTTAAGGCAATCTTTTTGCTGCGAAAGCGTTTCCA‑AAAACGGGTT‑AGATGATTTTTTTGTCGTTAAATGCCTGAAAAACA‑GGCA‑GGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAgc                                                                                                                     <  2:470211/150‑1 (MQ=255)
                                   tCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                                 >  2:919481/1‑151 (MQ=255)
                                     tGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                               >  2:754831/1‑151 (MQ=255)
                                       cTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                                             >  1:508320/1‑151 (MQ=255)
                                            ttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                         >  1:550475/1‑150 (MQ=255)
                                                 tttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATg                                                                                                   >  1:301568/1‑151 (MQ=255)
                                                 tttCATGCAATCTTCTTGCTGCGAAAGCTTTTGCA‑AAAACAGTTT‑AGATTATTTTTTTGTCGTTTATTACTTTAAAAACA‑TGCA‑TGCCCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                    <  1:1539386/150‑1 (MQ=255)
                                                 ttacATGCAATCTCTTTGCTGGGCAAGCTTTTCCA‑AGAACAGTTA‑AGATGATTTTTTTTTCGTTTACTCCCTAAAAACCA‑TCCA‑TGAACAAAAAAATAAAATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                    <  1:178287/147‑1 (MQ=255)
                                                  ttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                                  >  1:1096980/1‑151 (MQ=255)
                                                     aTGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTACTGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGCCTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                               >  1:557240/1‑151 (MQ=255)
                                                      tGCATTCTTCTTGCTGCGCAAGCTTTTTCC‑AAAAAAGGTT‑AGATAATTTTTTTGTCGTTTAATGCCTGAAAAACA‑TGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                               <  1:884338/150‑1 (MQ=255)
                                                         caTCTTCTTCCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAGA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGtt                                                                                           >  1:1499478/2‑151 (MQ=255)
                                                            cttcttGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGc                                                                                        >  2:1521072/1‑151 (MQ=255)
                                                              tttttcctgcgaaGCCTTTTCC‑AAAACGGGTTAAAATGTTTTTTTTCCCG‑TTAAATCCTTTAAAACATTGAA‑GGACCCAAAAAAAAATAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGtt                                                                                           <  2:608519/136‑1 (MQ=255)
                                                              ttttGCTGCGAAACCGTTTTCC‑AAACAAGGTT‑AGGTGTTTTTTTTTTGTTTTAATGCCTAT‑AAACG‑TCCATTGTCCCAAAAAATAATAAAAAAAATTCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                          <  2:1037603/145‑1 (MQ=255)
                                                              tcttGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                       >  1:1233022/1‑150 (MQ=255)
                                                                ttGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                       >  2:588268/1‑148 (MQ=255)
                                                                      cgcAAGCTTTTTCC‑AGACAAGTTA‑AGATTTTTTTTTTTTCGTTAATTCCCTGAAAAACA‑TGAT‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtc                                                                               <  1:925829/150‑1 (MQ=255)
                                                                         acggtttttCC‑AAAGCAGGTA‑AGATTATTTTTTTTTCACTTAATGCCTTAAAAACA‑TCCA‑TGCACCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                       <  1:1707502/134‑1 (MQ=255)
                                                                         aaGCTTTTCCC‑AGAACAGGTT‑AGATGTTTTTTTTGTCTCTTAATCCTTAAAAAACA‑TGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                            <  2:137684/150‑1 (MQ=255)
                                                                         aaGCTTTTCCA‑AAAACAGGTT‑AGATGTTTTTTTTGTCGTTTAATGCTTGAAAAACA‑TGCA‑TGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                           <  2:791679/151‑1 (MQ=255)
                                                                         aaGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                           >  1:1179900/1‑151 (MQ=255)
                                                                          aggcttttCCAAGAACGGTTT‑AAATGATTTTTTTTTCGTTAAATGCCTGAAAAAAA‑TGCA‑GGAGCAAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                            <  2:1603916/146‑1 (MQ=255)
                                                                              ttttCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                        >  2:366841/1‑149 (MQ=255)
                                                                              tttcCC‑AGAACAGTTT‑AGATGTTTTTTTTGTCTCTTATTCCTTAAAAAACT‑TGCT‑TGACCCAAAAAAAAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCgg                                                                          <  1:99410/147‑1 (MQ=255)
                                                                               tttccaaaaaCGGGTT‑AGTTGTTTTTTTTGTCGTTAAATGCTTAAAAAACA‑TCCA‑TGACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                                       <  2:254517/142‑1 (MQ=255)
                                                                               ttccc‑AGAACAGGTT‑AAATGATTTTTTGGGCGTTTAATCCCTGAAAAACA‑TACA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                                      <  2:1054225/147‑1 (MQ=255)
                                                                                  cc‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                     >  2:798871/1‑148 (MQ=255)
                                                                                  cc‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                     >  1:1366755/1‑148 (MQ=255)
                                                                                   c‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                     >  1:411399/1‑147 (MQ=255)
                                                                                     agaaagggTT‑AGATGATTTTTTTGTCGTTTAATGCTTAAAAAACA‑GGCA‑TGACCCACAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAt                                                                 <  2:1490458/144‑1 (MQ=255)
                                                                                      gAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                               >  2:1364133/1‑151 (MQ=255)
                                                                                       aaCAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                              >  2:975245/1‑151 (MQ=255)
                                                                                         cAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGc                                                             >  1:811480/1‑150 (MQ=255)
                                                                                            ttt‑AGATTATTTTTTTGTCGTTAAATCCCTAAAAACCA‑TGAT‑TGGCCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAt                                                           <  2:490216/148‑1 (MQ=255)
                                                                                              t‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                                       >  1:962616/1‑151 (MQ=255)
                                                                                                      tttttttGTCGCTTAATGCCTGAAAAACA‑TGCA‑TGACCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTAc                                                   <  2:876267/146‑1 (MQ=255)
                                                                                                       cTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                                >  2:1405515/1‑150 (MQ=255)
                                                                                                         ttttttCGTTAAATGCCTAAAAAACA‑TGCA‑TGACCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcat                                              <  1:1660604/150‑1 (MQ=255)
                                                                                                         ttttGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcat                                              >  1:1929968/1‑150 (MQ=255)
                                                                                                           ttGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                           >  1:226805/1‑151 (MQ=255)
                                                                                                           ttGTCGATTAATGCCTGAAAAACA‑TGCA‑TAACCCAAAAAATAAAAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                            <  1:1454483/150‑1 (MQ=255)
                                                                                                            tGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                          >  2:964452/1‑151 (MQ=255)
                                                                                                            tGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                          >  2:1299295/1‑151 (MQ=255)
                                                                                                            tGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                          >  2:925203/1‑151 (MQ=255)
                                                                                                               cgtttAATGCCTAAAAAACA‑TGCA‑TGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtg                                         <  1:609150/146‑1 (MQ=255)
                                                                                                                gCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                       >  1:916860/1‑150 (MQ=255)
                                                                                                                 cTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGa                                      >  1:1531653/1‑150 (MQ=255)
                                                                                                                  ttAATCCTTGAAAACCA‑TGCT‑TGACCCAAAAAAAAATAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTcatcat                                           <  2:251806/144‑1 (MQ=255)
                                                                                                                  ttAATCCCTAAAAAACA‑TGAA‑TGCGCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGa                                      <  2:85427/149‑1 (MQ=255)
                                                                                                                  taaatgcttaaaaaaCA‑TGAA‑TGACCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgt                                        <  2:604262/136‑1 (MQ=255)
                                                                                                                        ccTGAAAAACA‑TGCA‑TGACCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                              <  2:73803/151‑1 (MQ=255)
                                                                                                                        ccTGAAAAACA‑TGCA‑GGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTaa                                 <  1:1626236/148‑1 (MQ=255)
                                                                                                                            tAAAACA‑TGCA‑TGAGCCACAAAGTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                           >  1:1407703/1‑150 (MQ=255)
                                                                                                                            tAAAAAA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                           >  2:203809/1‑150 (MQ=255)
                                                                                                                             aaaaCA‑TGCA‑TGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                           <  2:595336/149‑1 (MQ=255)
                                                                                                                             aaaaCA‑TCCA‑GGGGCCAAAAAATATAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa                         <  2:1119894/151‑1 (MQ=255)
                                                                                                                              aaaCA‑TGCA‑TGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                        <  2:145766/151‑1 (MQ=255)
                                                                                                                               aaCA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                        >  1:1735669/1‑150 (MQ=255)
                                                                                                                               aaCA‑TGCA‑TGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                       <  1:1715813/151‑1 (MQ=255)
                                                                                                                                aCA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                       >  1:348604/1‑150 (MQ=255)
                                                                                                                                  a‑tgca‑tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                      >  2:70307/1‑149 (MQ=255)
                                                                                                                                    tgca‑tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt                   >  2:24524/1‑151 (MQ=255)
                                                                                                                                    tgca‑tgAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAATTAAag                    <  2:84702/150‑1 (MQ=255)
                                                                                                                                     tgaatgaccaaaaaaaTAATAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa                     <  1:1267888/137‑1 (MQ=255)
                                                                                                                                       a‑tgAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt                   <  2:1696886/148‑1 (MQ=255)
                                                                                                                                       a‑tgACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag                <  1:312087/151‑1 (MQ=255)
                                                                                                                                         tgAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag                <  1:269933/150‑1 (MQ=255)
                                                                                                                                          gAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg              >  2:1420870/1‑151 (MQ=255)
                                                                                                                                            cccAAAAAATAAAAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt               <  1:1456054/147‑1 (MQ=255)
                                                                                                                                             ccACAAAATAATAAAAAAAACCCCGCCATAAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt               <  2:643220/147‑1 (MQ=255)
                                                                                                                                               aaaaaaaaaaaaaaaaaaCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg              <  1:81027/144‑1 (MQ=255)
                                                                                                                                               aaaaaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAata          <  2:772699/148‑1 (MQ=255)
                                                                                                                                                caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt        >  1:82565/1‑151 (MQ=255)
                                                                                                                                                caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt        >  1:1292583/1‑151 (MQ=255)
                                                                                                                                                aaaaaaaATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt        <  1:43695/150‑1 (MQ=255)
                                                                                                                                                 aaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtc       >  1:1848715/1‑151 (MQ=255)
                                                                                                                                                 aaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtc       <  2:717178/151‑1 (MQ=255)
                                                                                                                                                 aaaaTAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat           <  1:1641234/147‑1 (MQ=255)
                                                                                                                                                  aaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct      <  1:391081/151‑1 (MQ=255)
                                                                                                                                                   aataatATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct      >  2:1634965/1‑150 (MQ=255)
                                                                                                                                                      aataTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg  >  1:1357283/1‑151 (MQ=255)
                                                                                                                                                       atatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg  >  1:846346/1‑150 (MQ=255)
                                                                                                                                                        tataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg  >  2:159279/1‑149 (MQ=255)
                                                                                                                                                        tataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg  >  2:1844400/1‑149 (MQ=255)
                                                                                                                                                          |                                                                                                                                                  
TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACA‑TGCA‑TGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGG  >  NC_000913/29346‑29642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑