Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,413,7350AT40.9% 173.4 / 64.5 110Y2* (TAT→TAA) ydaCDUF1187 family protein, Rac prophage; putative double‑strand break reduction protein
Reads supporting (aligned to +/- strand):  ref base A (9/56);  new base T (45/0);  total (54/56)
Fisher's exact test for biased strand distribution p-value = 3.30e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 113 total aligned reads displayed.

TTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAT  >  NC_000913/1413593‑1413883
                                                                                                                                               |                                                                                                                                                       
ttACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTC‑ATTTTATTCa                                                                                                                                                     >  2:644279/1‑147 (MQ=255)
 tACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGaa                                                                                                                                                 <  1:1759294/150‑1 (MQ=255)
 tACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGaa                                                                                                                                                 <  1:285442/150‑1 (MQ=255)
 tACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGaa                                                                                                                                                 <  1:434198/150‑1 (MQ=255)
    tttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTATATTTTTTA‑ATGAac                                                                                                                                                >  2:201347/1‑148 (MQ=255)
    tttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATTAAC‑Acc                                                                                                                                            >  2:19653/1‑151 (MQ=255)
     ttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACATGAAC‑Acc                                                                                                                                            >  2:1413888/1‑150 (MQ=255)
     ttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAac‑ac                                                                                                                                             <  1:1886361/149‑1 (MQ=255)
      tCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATGAac‑a                                                                                                                                              >  1:1808602/1‑147 (MQ=255)
         gCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCat                                                                                                                                       <  1:1547777/151‑1 (MQ=255)
           tctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTTATGAac‑aacccc                                                                                                                                         >  1:1536055/1‑142 (MQ=255)
           tctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATTAAA‑ACCTCCctt                                                                                                                                      >  2:572324/1‑150 (MQ=255)
              ctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCattat                                                                                                                                    <  1:1245222/149‑1 (MQ=255)
                ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCattattatt                                                                                                                                <  2:1194415/151‑1 (MQ=255)
                ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCattatt                                                                                                                                   <  1:39794/148‑1 (MQ=255)
                 gAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTAttt                                                                                                                               <  1:1430519/151‑1 (MQ=255)
                   aaCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATGAAC‑ACCCCCCTTAtttttt                                                                                                                               >  2:1831534/1‑149 (MQ=255)
                    aCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATGAAC‑ACCCCCCTTATTAttt                                                                                                                               >  2:1040364/1‑148 (MQ=255)
                    aCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCa                                                                                                                            <  2:1794616/151‑1 (MQ=255)
                      gCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGt                                                                                                                          <  2:254687/151‑1 (MQ=255)
                       ccTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAA‑ACCCCCCTTTTTTTTTTCAGTg                                                                                                                         >  2:1718918/1‑151 (MQ=255)
                        cTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTTATGAAC‑ACCCCCCTTTTTTTTTTCAATgg                                                                                                                        >  1:834361/1‑151 (MQ=255)
                          gCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTgg                                                                                                                        <  1:679166/149‑1 (MQ=255)
                             tcttTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAC‑AACTCCCATAtttttttccgggggt                                                                                                                      >  2:410055/1‑139 (MQ=255)
                               ttttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTCATTAAA‑AACCCCCTTTTTTTTTTCAGTgg                                                                                                                        >  1:1892957/1‑144 (MQ=255)
                               ttttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATGTAC‑AACCCCCTTTTTATTTTTATTGGtttcgtt                                                                                                                 >  1:1103517/1‑146 (MQ=255)
                               ttttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAA‑ACCTCCATTATTTTTTTCAGTGgtttgttt                                                                                                                 >  2:1233483/1‑151 (MQ=255)
                                tttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATTAAA‑ACCCCCCTTTTTTTTTTCTGTGGGTTGttt                                                                                                                 >  1:1256408/1‑150 (MQ=255)
                                tttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGttt                                                                                                                 <  1:1507427/150‑1 (MQ=255)
                                tttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGt                                                                                                                   <  1:1785497/148‑1 (MQ=255)
                                  tttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑t                                                                                                              <  1:970537/150‑1 (MQ=255)
                                   ttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACATTAAA‑AACCCCCTTTTTTTTTTCCGTGGTTCCtttt‑tt                                                                                                             >  2:1489869/1‑150 (MQ=255)
                                      ccTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATAAAC‑ACCCCCCTTTTTTTTTTCAGTGGTTTGtttt‑tt                                                                                                             >  2:605825/1‑147 (MQ=255)
                                        tGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAAAGAAC‑ACCCCCCTTATTTTTTTCCGTGGTTCGTTTA‑tt                                                                                                             >  2:325976/1‑145 (MQ=255)
                                         gagaGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑GTTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCt                                                                                                       <  2:372414/150‑1 (MQ=255)
                                             gCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTT‑ATTTTTTAAATGAAA‑CCCCCCCTTATTTTTTTCAGTGGGTCTTTTT‑TTTCATCttt                                                                                                     >  2:1473191/1‑148 (MQ=255)
                                             gCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATTTAA‑ACCCCCATTTTTTTTTTCTGTGGGTTGtttt‑tttcctttttttt                                                                                                  >  1:1526073/1‑140 (MQ=255)
                                               aTTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCTAGt                                                                                                <  1:1716018/151‑1 (MQ=255)
                                               aTTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGt                                                                                                <  2:1527817/151‑1 (MQ=255)
                                                ttttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAAAGAAA‑AACCCCATTATTTTTTTCAGTGGGTTGTTTT‑TTTCCTCTTTTTAGTg                                                                                               >  1:1555681/1‑151 (MQ=255)
                                                  ttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTTATTAAA‑ACCCCCCTTTTTTTTTTCAGTGGGTTGTTTT‑TTTTATCttt                                                                                                     >  1:1101927/1‑143 (MQ=255)
                                                  ttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTCATTAAA‑ACCCCCCTTTTTTTTTTCTCTGGTTTGTTTT‑TTTCATCTTTTGAGt                                                                                                >  1:574301/1‑148 (MQ=255)
                                                   tttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAC‑ACCTCCATTATTTTTTTCAGTGGTTCGGTTT‑TTTTATCTTTTTAGTGctt                                                                                            >  1:525056/1‑151 (MQ=255)
                                                   tttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGct                                                                                             <  2:1268397/150‑1 (MQ=255)
                                                   tttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGGA‑AATTTTTTAATAAAA‑ACCTCCATTATTTTTTTCAGTTGTTCGTTTT‑TTTCATCTTTcttatggtt                                                                                            >  2:1596252/1‑143 (MQ=255)
                                                      cGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGcttctt                                                                                         <  2:281194/151‑1 (MQ=255)
                                                       gCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATTCATGCAC‑ACCTCCATTATTTTTTTCAGTGGGTTGTTTT‑TTTCATCTTTTGTGTGCTTCttt                                                                                        >  2:1872099/1‑151 (MQ=255)
                                                        cATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCtttt                                                                                       <  2:689926/151‑1 (MQ=255)
                                                         aTTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTAGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCttttt                                                                                      <  1:822348/151‑1 (MQ=255)
                                                           tCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTc                                                                                     <  2:1790210/150‑1 (MQ=255)
                                                              gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAc                                                                                   <  2:1365316/149‑1 (MQ=255)
                                                               aTTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAC‑ACCCCCCTTTTTATTTTCCGTGGGTCGTTTT‑TTTCATCTTTCCAGTGGTTTTTTTTTACtt                                                                                 >  2:1475833/1‑150 (MQ=255)
                                                                 ttCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAC‑ACCCCCCTTATTTTTTTCAGTGGGTCGGTTT‑TTTCATCTTTTTAGGGCTTTTTTTTTACtt                                                                                 >  2:1791936/1‑148 (MQ=255)
                                                                   cGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTTATTAAC‑ACCCCCCTTCTTTTTTTCAGTGGGTTGTTTT‑TTTCTTCTTTTTAGTGCTTCtttttt                                                                                     >  1:1309615/1‑141 (MQ=255)
                                                                   cGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATTAAA‑ACCCCCCTTATTTTTTTCAGTGGTTTGTTTT‑TTTTATCTTTTTAGTGGTTCTTTTTTTCTTccacc                                                                            >  1:296921/1‑151 (MQ=255)
                                                                    gTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTccacca                                                                           <  1:1132971/151‑1 (MQ=255)
                                                                       aGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑aa                                                                       <  2:56044/151‑1 (MQ=255)
                                                                       aGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑aa                                                                       <  1:652521/151‑1 (MQ=255)
                                                                       aGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑a                                                                        <  1:657637/150‑1 (MQ=255)
                                                                         tttAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACATAAAA‑ACCACCATTTTTTTTTTCACAGGTTCGTTTT‑TTTCATCTTTTTAGTGCttttttttttctt                                                                                 >  2:1388924/1‑135 (MQ=255)
                                                                          ttAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAAATAAA‑ACCCCCCTTATTTTTTTCAATGGGTTGTTTT‑TTTCATCTTTTTAGTGGTTTTTTTTTTCTTTCACCAT‑aaac                                                                     >  1:351889/1‑148 (MQ=255)
                                                                          ttAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AAcc                                                                     <  1:1904946/150‑1 (MQ=255)
                                                                           tAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATGAAA‑ACCCCCCCTATTTTTTTCAGTGGGTCGTTTT‑TTTCATCTTTTTAGTGCTTCTTTTTTTCTTtcaccccaaaccg                                                                    >  1:673321/1‑143 (MQ=255)
                                                                              aTTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTc                                                                <  2:1799003/151‑1 (MQ=255)
                                                                              aTTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTc                                                                <  2:164108/151‑1 (MQ=255)
                                                                                tttGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTCAAGAAC‑ACCTCCCTTTTTTTTTTCCGTGGTTTGTTTT‑TTTCCTCTTTTGAGGGGTTCTTTTTTTCTTCCACCCTAAACCGGt                                                                  >  2:481169/1‑148 (MQ=255)
                                                                                  tGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAA‑ACCTCCCTTATTTTTTTCACTGGGTCGTTTT‑TTTCCTCTTTCTCGTGCTTTTTTTTTACTTTCCCCAT‑AACCCGTTCtgg                                                             >  1:427031/1‑150 (MQ=255)
                                                                                  tGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCggg                                                             <  2:493443/150‑1 (MQ=255)
                                                                                   gAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGAt                                                           <  2:629886/151‑1 (MQ=255)
                                                                                    aaTATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGAtt                                                          <  2:1017961/151‑1 (MQ=255)
                                                                                    aaTATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑AATTTTTTCATGAAA‑AACTCCCTTATTTTTTTCAGTGGGTCGTTTT‑TTTCCTCTTTTGGGGTGTTTTTTTTTACTTTCACCCT‑AAACGGTTCgggggt                                                          >  2:196967/1‑148 (MQ=255)
                                                                                     atatCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATAAAA‑ACACCCCTTTTTTTTTTCAGAGGGTCGTTTT‑TTTCCTCTTTTTTGTGCTTCTTTTTTTTTTTCACCCT‑AACCGGGTCGGGCtt                                                          >  1:1136077/1‑150 (MQ=255)
                                                                                     atatCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACATGAAC‑AACCCCCTTATTTTTTTCAGTGGGTCGTTTT‑TTTCATTTTTTTGGTGGTTTTTTTTTCCTTCCCCCCT‑AAACGGTTCggg                                                             >  2:679179/1‑147 (MQ=255)
                                                                                      tatCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACAACAAA‑AACCCCCTTTTTTTTTTCCGTGGGTTGCTTT‑TTTCCTCTTTCGCGAGGCTTTTTTTTACTTTCCCCCT‑AAACCGTTCgggg                                                            >  1:375801/1‑146 (MQ=255)
                                                                                           tGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTTAATGAAA‑ACCCCCCTTTTTTTTTTCCGTGGGTTGTTTT‑TTTCATTTTTTGTGGGCTTCTTTTTTACTTCCCCCCT‑AACCCGGTCGGGGTTCTCATcc                                                   >  2:1521616/1‑151 (MQ=255)
                                                                                           tGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATc                                                    <  1:476602/150‑1 (MQ=255)
                                                                                               cAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTATATGTACAACCCCCCTTTTTTTTTCTGGGGGTT‑GTTTT‑TTTCCTTTTTCCCTTGCTTTTTTTTTTTTTCCCCCAT‑TACCCGTGCGGGGtttggttcccgt                                                >  1:853693/1‑140 (MQ=255)
                                                                                               cAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACAATAAC‑ACCCCCATTATTATTTTCAGTGGTTCGTTTA‑TTTCATCTTTCGTGTGCTTTTTTTTTACTTCCCCCAC‑AAACGGGTCGGGGTTCGCATcc                                                   >  2:1586467/1‑147 (MQ=255)
                                                                                                    agtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAC‑ACCTCCCCTTTTATTTTCCATGGGTTGTTTT‑TTTTCTCTTTTGTGTTGTTCTTTTTTTTTTTCCCCCT‑AAACGGTTCGGGGtttggctccctt                                                >  1:41123/1‑135 (MQ=255)
                                                                                                       agGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTACATTAAC‑AACACCACTATTTTTTTCAGGGGGTTGTTTATTTCAATCTTT‑TAGGGGTTTTTTTTTACTTTCTCCAC‑AACCAGGTCGGGGTTCGCAACCGTTaccccttt                                        >  2:852627/1‑144 (MQ=255)
                                                                                                         gAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTc                                     <  2:418515/151‑1 (MQ=255)
                                                                                                          aGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTTTAAATGAAA‑ACCCCCCTTATTTTTTTCCGTGGGTTGTTTT‑TTTCCTCTTTTTAGTGCTTCTTTTTTTCTTTCCCCCT‑AAACCGTTTGGGGTTCGCCTCCGTTTCACTtctctc                                     >  1:446870/1‑150 (MQ=255)
                                                                                                           gTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCgg                                   <  2:462361/151‑1 (MQ=255)
                                                                                                                    tccttTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATc                            <  1:56290/149‑1 (MQ=255)
                                                                                                                     ccttTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTg                         <  1:572223/151‑1 (MQ=255)
                                                                                                                         ttCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGaaa                      <  2:335376/150‑1 (MQ=255)
                                                                                                                          tCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAAt                     <  1:1027674/150‑1 (MQ=255)
                                                                                                                            aaTAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGc                  <  2:1753606/151‑1 (MQ=255)
                                                                                                                             aTAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCt                 <  2:286503/151‑1 (MQ=255)
                                                                                                                               aGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGTGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCttt               <  2:480787/151‑1 (MQ=255)
                                                                                                                               aGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCtt                <  2:875611/150‑1 (MQ=255)
                                                                                                                                  ggCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCa             <  1:1181801/150‑1 (MQ=255)
                                                                                                                                  ggCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAc            >  2:1107705/1‑151 (MQ=255)
                                                                                                                                       tA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGtt        >  1:255976/1‑150 (MQ=255)
                                                                                                                                        a‑aTTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTa       <  1:1763435/150‑1 (MQ=255)
                                                                                                                                          aTTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACt     <  2:1895689/151‑1 (MQ=255)
                                                                                                                                            tttATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCCTCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACt     >  2:283980/1‑149 (MQ=255)
                                                                                                                                            tttATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTg    >  1:1376791/1‑150 (MQ=255)
                                                                                                                                              tataCATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAt  <  2:350963/150‑1 (MQ=255)
                                                                                                                                              tataCATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAt  <  2:1187743/150‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                       
TTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTA‑ATTTTATACATGAAC‑ACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAT  >  NC_000913/1413593‑1413883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑