Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,601,1600GA43.9% 63.8 / 31.7 57F309F (TTC→TTT) ftsXputative ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (27/5);  new base A (0/25);  total (27/30)
Fisher's exact test for biased strand distribution p-value = 2.32e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTCGCACCAATC  >  NC_000913/3601011‑3601307
                                                                                                                                                     |                                                                                                                                                    
agTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCg                                                                                                                                                      >  1:736429/1‑150 (MQ=255)
agTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCg                                                                                                                                                      >  1:382174/1‑150 (MQ=255)
     aaCACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑cc                                                                                                                                               >  1:658203/1‑151 (MQ=255)
      acacGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCt                                                                                                                                              <  1:577387/151‑1 (MQ=255)
        acGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCtgt                                                                                                                                            >  1:816376/1‑151 (MQ=255)
         cGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCtgtg                                                                                                                                           >  2:792645/1‑151 (MQ=255)
              ttattaTTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACt                                                                                                                                      >  2:852761/1‑151 (MQ=255)
                 ttattCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTc                                                                                                                                    <  2:560218/150‑1 (MQ=255)
                   attCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGc                                                                                                                                 >  1:33579/1‑151 (MQ=255)
                   attCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGc                                                                                                                                 <  2:429896/151‑1 (MQ=255)
                        ggCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAAcc                                                                                                                             <  2:1036408/150‑1 (MQ=255)
                        ggCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAAcc                                                                                                                             >  1:584479/1‑150 (MQ=255)
                               aGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATg                                                                                                                      >  1:343292/1‑150 (MQ=255)
                                   gCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAAt                                                                                                                 >  1:840113/1‑151 (MQ=255)
                                       aaaTGTTGTCCCGGGGCAACCCCCGCTCCCCCCCAGCCAATCATCGAGCATACCAGCAGAAATAGCAGCCATTCAACAAATGATAACCCATTAATATAAACCTTCGTCCCAAAAC‑CCTGTCCCCCTCCCGCACCCGCCGATGACAATCgc                                                                                                              <  1:250380/150‑1 (MQ=255)
                                        aaTGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCgc                                                                                                              >  1:233939/1‑149 (MQ=255)
                                            ttggccggTGGCAACCCCCCCGCCCCCCCAACCAATCATCGACCACCCCAGCAGCAATACCAGGCATTCATCGAATAAAACGCAATTAATAAAAACCTTCGTACCAAAAA‑CCGGTCCCCCTCCCGAAACCGCCGATGACAATCgcagca                                                                                                          <  2:655928/142‑1 (MQ=255)
                                               tACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCAcc                                                                                                        >  2:645955/1‑148 (MQ=255)
                                               tACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCAcc                                                                                                        >  2:226167/1‑148 (MQ=255)
                                                   gTGGAAACCCACGCGCCCCCCCACCAAATCACCGAGCATCCCAGAAGAAATAGCAGGCATTCATCAAATGAAAAGCCATTGATAAAAAACTTCGTCCCAAAAC‑CCTGTGCCACTCCCACAACCGCCGATGACAATCGCAGCACCAg                                                                                                      <  1:674552/146‑1 (MQ=255)
                                                        aaGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGAc                                                                                            >  1:1007179/1‑151 (MQ=255)
                                                           ccACGCTCCCCCCCAGCAAATCACCGACCATCCCAGAAAAAAAAGCAGGCATTCATCAAATGAAAAGCCATTAATATAAACCTTCGTCCCAAAAC‑CCTGTCCCACTCCCACAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACaa                                                                                          <  1:901563/150‑1 (MQ=255)
                                                                cccccccccacccaATCACCGACCAACCCAGCAGCAATAGCAGGCATTAACCAAATGATAAGCAATTGATATCAACCTCCTTCCCAAACC‑CCTGTCCCCTTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAAt                                                                                       <  1:487611/142‑1 (MQ=255)
                                                                cTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTa                                                                                     >  1:68932/1‑150 (MQ=255)
                                                                   ccccccAGCCAATCATCGACCATCCCAGCAACAAAGGCAGGCATTCACCGAATAAAAAGCCATTAAAATCAACTTTCTTCCCAAAAA‑CCTGTGCCCCTCCCCCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAAt                                                                                   <  1:249740/146‑1 (MQ=255)
                                                                      cccAGCAAATCAACGAGCATACCAGAAAGAAGAACGGGCATTCATAGAAGGATAAGCATTTGATACAAATCTCCGTCCCAAAAG‑CCGGGCCCACTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGaca                                                                               <  1:613177/150‑1 (MQ=255)
                                                                      cccAACAAATCACCGAGCATCCCAGAAGAAATAGCAGGCTTTCATCGAATGATAAGCATTTAATATAAAACTTCGTTCCAAAAC‑CCGGTGCCCTTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGac                                                                                <  1:305910/149‑1 (MQ=255)
                                                                      ccaaacaaaaaatcGAGCATACCAGCAACAAGCGCGGGCATTCATCAAATAAAAAGCATTTGATATAAAACTTCGTCCCAAAAC‑CCTGTCCCTCCTCCACAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGacaa                                                                              <  2:313526/140‑1 (MQ=255)
                                                                             aaTCATCAACCATCCCAGCAGAAATAGCGGGCATTCATCAAATAATAAGCTATTAATAAAAATCTTCGTCCCAAAAC‑CCTGTGCCCCTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATg                                                                         <  1:183656/149‑1 (MQ=255)
                                                                                catcGAGCATACCAGCAGAAAAAGCAGGCATTCATAAAATAAAAAGCCATTAATAAAAACCTCCGTCCCAAAAC‑CCTGTCCCCCTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATgcg                                                                       <  2:879077/148‑1 (MQ=255)
                                                                                caccGACCACACCAGCAACAATAGCAGGTTTTCATCAAATGATAAGCCTTTAATATAAATCTTCGTCCCAAAAC‑CCTCGCCCCCTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATg                                                                         <  1:849206/143‑1 (MQ=255)
                                                                                        atcccAGCAGAAATAGCAGGCATTCATCGAATAAAAAGCTATTGATATCAACCTTCGTCCCAAAAC‑CCTGTGCCCCTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATgc                                                                        <  1:45768/136‑1 (MQ=255)
                                                                                           ccAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCTTTGATATAAACCTTCGTCCCAAAAC‑CCTGTCCCTCTCCCCAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATccc                                                           <  1:588243/149‑1 (MQ=255)
                                                                                             agcagaAATAGCAGGCTTTCATGAAATAAAAACCAATTTATATAAACCTTCTTCCCAAAAC‑CCTGTGCCACTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGaaaa                                                               <  1:734121/143‑1 (MQ=255)
                                                                                                   aaaagcagcCATTCAAAGAATAATAAGCTATTAATATCAACCTTC‑TTCCAAAAACCCTGTCCCACTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTgc                                                   <  1:895661/146‑1 (MQ=255)
                                                                                                   aaTAGCGGGCATTCATCAAATAATAAGCCATTAATATAAACCTTCGTCCCAAAAC‑CCTGTCCCCCTCCCAAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTg                                                    <  1:51117/148‑1 (MQ=255)
                                                                                                     tAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGcc                                                >  1:690981/1‑150 (MQ=255)
                                                                                                       gCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGAAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGccacc                                             >  2:633354/1‑151 (MQ=255)
                                                                                                          ggaaTTCATCAAATAAAAACCCATTGAAATCAACCTTCTTTCAAAAAC‑CCTGTCCCCCTCCCGAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGcca                                               <  2:829643/143‑1 (MQ=255)
                                                                                                             aTTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATAc                                         >  1:791923/1‑149 (MQ=255)
                                                                                                              ttCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAgg                                      >  1:391741/1‑151 (MQ=255)
                                                                                                                 aTCAAATGAAAACCCTTTGATATAAACCTTCTTCCCAAAAC‑CCTGTCCCACTCCCCCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGa                                     <  1:824871/149‑1 (MQ=255)
                                                                                                                         aTAACCCATTTATATAAACCTTCGTCCCAAAAC‑CCTGTCCCACTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAg                           <  1:500607/151‑1 (MQ=255)
                                                                                                                           aaGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAgg                          >  1:800312/1‑150 (MQ=255)
                                                                                                                             gCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATg                       >  2:1066848/1‑151 (MQ=255)
                                                                                                                              ctaTTAATATCAAACTTCGTCCCGAAAC‑CCGGCCCCCCTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGAt                        <  1:513101/147‑1 (MQ=255)
                                                                                                                              ccATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATg                       >  1:909162/1‑150 (MQ=255)
                                                                                                                                 ttGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATc                   >  2:499557/1‑151 (MQ=255)
                                                                                                                                  taatatAAAACTTC‑TTCCAAAAACCCTGTCCCCCTCCCCAAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATc                   <  1:429904/148‑1 (MQ=255)
                                                                                                                                  tGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATcc                  >  1:288160/1‑151 (MQ=255)
                                                                                                                                   gATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATcc                  >  1:972970/1‑150 (MQ=255)
                                                                                                                                    atatCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCa                 >  1:601232/1‑150 (MQ=255)
                                                                                                                                     tatCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGA‑AATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATc               >  2:315017/1‑150 (MQ=255)
                                                                                                                                       acAACCTTCGTACCAAAAC‑CCTGCCCCCCTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCt              <  1:858177/149‑1 (MQ=255)
                                                                                                                                        cAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGt            >  2:332493/1‑151 (MQ=255)
                                                                                                                                         aaaCTGCGTCCCAAAAC‑CCTGTCCCCTTCCCACAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTc           <  2:825544/151‑1 (MQ=255)
                                                                                                                                          accTTCGTCCCAAAAC‑CCTGTGCCACTCCCCCAACCGCCGATGACAATCGCAGCACCTGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTCg          <  1:676544/149‑1 (MQ=255)
                                                                                                                                                 ttCCAAAAC‑CCTGTGCCACTCCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTCGCa        <  1:11515/146‑1 (MQ=255)
                                                                                                                                                   ccGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTCGCACCAATc  >  2:582461/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAA‑CCTGTGCCACTTCCGCAACCGCCGATGACAATCGCAGCACCAGAATTTCTGACAAAATTAATGACAACAATGCGCCAGAAAATCCCAGCAGTGCGCCACCATACAGGAACGGGCGCAGGATGAATCCATCTGTCGCACCAATC  >  NC_000913/3601011‑3601307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑