Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,413,735	0	A	T	48.0%	82.5 / 56.1	75	Y2* (TAT→TAA)	ydaC	DUF1187 family protein, Rac prophage; putative double‑strand break reduction protein
Reads supporting (aligned to +/- strand):  ref base A (2/37);  new base T (36/0);  total (38/37)
Fisher's exact test for biased strand distribution p-value = 2.26e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGG  >  NC_000913/1413589‑1413885                                                                                                                                                   |                                                                                                                                                           aGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACa                                                                                                                                                        <  2:1127415/151‑1 (MQ=255)   ttttACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACAt                                                                                                                                                       >  1:190340/1‑150 (MQ=255)              gCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTAATG‑AA‑AACCTcc                                                                                                                                           >  2:60385/1‑149 (MQ=255)              gCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATT‑AA‑AACcccc                                                                                                                                           >  2:415380/1‑149 (MQ=255)                tctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATT‑AA‑CACCTCCctt                                                                                                                                        >  2:215374/1‑150 (MQ=255)                tctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTATATT‑AA‑CAcc                                                                                                                                              >  1:665581/1‑144 (MQ=255)                 ctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATG‑AA‑AACcccc                                                                                                                                           >  1:1006967/1‑146 (MQ=255)                 ctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCatt                                                                                                                                        <  1:794140/149‑1 (MQ=255)                   ctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCattat                                                                                                                                      <  1:1007602/149‑1 (MQ=255)                     ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATG‑AA‑CACCCCCactattttt                                                                                                                                  >  1:950707/1‑151 (MQ=255)                     ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATT‑AA‑AACCTCCatttttatt                                                                                                                                  >  2:558530/1‑151 (MQ=255)                       aagcGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTc                                                                                                                                <  2:919441/148‑1 (MQ=255)                         aCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCa                                                                                                                              <  2:852239/151‑1 (MQ=255)                           gCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGt                                                                                                                            <  1:675910/151‑1 (MQ=255)                            ccTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTTATTTTTTTAATG‑AA‑CACCCCCCCTATTATTTTCAGt                                                                                                                            >  2:122958/1‑150 (MQ=255)                             cTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATG‑AA‑AACCCCCCTTTTTAttttccctgg                                                                                                                          >  1:693542/1‑144 (MQ=255)                               gCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGGAATTTTTTACAAT‑AA‑CACCCCCATTATTATTTTCAGT‑gg                                                                                                                         >  1:290409/1‑149 (MQ=255)                                  tcttTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTc                                                                                                                      <  1:1045184/149‑1 (MQ=255)                                  tcttTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCg                                                                                                                     <  2:1044174/150‑1 (MQ=255)                                    ttttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTGATTTTATTAATC‑AC‑CACCCCCCTTAttttttattgttggttg                                                                                                                      >  1:287816/1‑137 (MQ=255)                                      ttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTTATT‑AA‑CACCCCCCCTTTTTTTTTTAGT‑Ggtttgttttt                                                                                                                >  2:1037628/1‑149 (MQ=255)                                           ccTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCAt                                                                                                           <  2:31190/151‑1 (MQ=255)                                              gagaGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCt                                                                                                         <  2:499977/150‑1 (MQ=255)                                               agagCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCtt                                                                                                        <  2:210633/150‑1 (MQ=255)                                                 agCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCg                                                                                                     <  2:486500/151‑1 (MQ=255)                                                 agCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCg                                                                                                     <  2:255157/151‑1 (MQ=255)                                                    aTTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGt                                                                                                  <  2:779886/151‑1 (MQ=255)                                                    aTTTTTTAGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTTGTTTTTTTCACA‑GA‑CATCGCCCTTATTATTTTCGAC‑GGAGCGTTTATTcctaacttcctg                                                                                                   >  2:479319/1‑140 (MQ=255)                                                       ttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATT‑AA‑CACCCCCCTTATTTTTTTCAGT‑GGGTTGTTTTTTTCATCttt                                                                                                       >  2:122932/1‑143 (MQ=255)                                                         ttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGCAATTTTTTAAATT‑AA‑AAACCCCATTTTTTTTTTCAGC‑GGCTCCTTTAtttactattttgtgtg                                                                                                 >  1:912511/1‑133 (MQ=255)                                                         ttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGAAATTTTTTTCATG‑AAGCACC‑CCCTTTTTTTTTCTCGC‑GGTTGGTTTAttttctttt                                                                                                        >  2:467918/1‑133 (MQ=255)                                                           cGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTTAATT‑AA‑AACCCCCCTTTTTTTTTTCAGT‑GGGTTGTTTTTTTCCTCTTTTTAGTGcttttt                                                                                           >  1:86562/1‑151 (MQ=255)                                                            gCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTATATT‑AA‑CAACCCCCTTATTTTTTTCAGT‑GGGTTGTTTTTTTCATCTTTTTAGTGCtttttt                                                                                          >  1:728556/1‑151 (MQ=255)                                                              aTTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTCATA‑AA‑CAACACCCTTTTTATTTTCTAT‑GGTTAGTTTTTTTTATCTTTTGATATCTTCttttt                                                                                        >  2:664294/1‑151 (MQ=255)                                                              aTTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCttttt                                                                                        <  2:1048073/151‑1 (MQ=255)                                                                  tGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATAAT‑AA‑AACCCCCCTTTTTTTTTTTAGT‑GGGTTGTTTTTTTCATCTTTTTAGGGCttttttttt                                                                                       >  2:1105313/1‑147 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTTAATTTTTATAAG‑AA‑AAACCCCCTTTTTTTTTTCCGC‑GGTTCGTTTTTTTTCTTTTTTCAGGGCTTCtttttt                                                                                       >  2:259595/1‑146 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATT‑AA‑AAACCCCCTTTTTTTTTTCAGT‑GGGTTGGTTTTTTCTTTTTTTGTGTGCttttttttttctt                                                                                   >  2:906347/1‑146 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCa                                                                                      <  1:91320/148‑1 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACtt                                                                                   <  1:624361/151‑1 (MQ=255)                                                                      ttCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATT‑AA‑AACCCCCCTTTTTTTTTTCAGT‑GGTTTGTTTTTTTTCTCTTTTGAGTGCttttttttttctt                                                                                   >  1:699265/1‑143 (MQ=255)                                                                       tCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTTAAG‑AA‑AAACCCCCTTTTTATTTTCCGT‑GGGTTGTTTTTTTCCTCTTTTTAGTGGTTTTTTTTTACtt                                                                                   >  1:847107/1‑147 (MQ=255)                                                                        cGTTAGTTTAGATTTTGAATATCCTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTCATG‑AA‑AAACTCCCTTTTTTTTTTTAGT‑GGGTTGTTTTTTTTATCTTTTTCGTGGTTCtttttttttttcccc                                                                              >  2:123269/1‑141 (MQ=255)                                                                         gTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTTATTTTTTATAAT‑AA‑AAACCCCCTTATTTTTTTTCTT‑GGGTCGTTTATTCCTTCTTTTCCGTGCttttttttttattcc                                                                                 >  2:1138805/1‑140 (MQ=255)                                                                            aGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑a                                                                          <  2:523387/150‑1 (MQ=255)                                                                                 aGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCgg                                                                     <  2:1101439/150‑1 (MQ=255)                                                                                 aGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCgg                                                                     <  2:897822/150‑1 (MQ=255)                                                                                     tttGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACAAT‑AA‑CAACTCCCCTATTATTTTCAGT‑GGTTTGTTTTTTTCCTTTTTTTAGTGCttttttttttctttcccc                                                                              >  1:706322/1‑128 (MQ=255)                                                                                     tttGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCg                                                                 <  1:836505/150‑1 (MQ=255)                                                                                       tGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTAATG‑AA‑AAACCCCCTTATTTTTTTCAGT‑GGGTTGTTTTTTTCATCTTTTGAGTGCTTCTTTTTTTCTTCCCCCAT‑AACCGGGTCggg                                                               >  1:812790/1‑150 (MQ=255)                                                                                            atCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCg                                                          <  1:106818/150‑1 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTCATG‑AA‑AACCCCCCTTATTATTTTCAGT‑GGGTTGTTTTTTTCATCTTTTGAGGGGTTCTTTTTTACTTTCACCCT‑AAACCGGTCGGGGTTCGCATcc                                                     >  1:692205/1‑150 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATcc                                                     <  1:141047/150‑1 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATcc                                                     <  2:756529/150‑1 (MQ=255)                                                                                                   ccAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGtt                                                  <  2:613745/151‑1 (MQ=255)                                                                                                   ccAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGtt                                                  <  2:688760/151‑1 (MQ=255)                                                                                                      gTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTTTATT‑AA‑CAACCCCCTTTTTTTTTTCTGG‑GGGTTGTTTTTTTCTTTTTTTTAGTGGTTCTTTTTTTTTTCCCCCAT‑AAACCGTTCTGGGGTTGCATcc                                                     >  2:390271/1‑145 (MQ=255)                                                                                                        tagtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATG‑AA‑AACCTCCCTTTTTATTTTCAGT‑GGTTCGTTTTTTTCATCTTTTCAGGGCTTCTTTTTTACTTTCACCCT‑TAACGGGTCGGGGTTTGCCTCCCttt                                                 >  2:818044/1‑146 (MQ=255)                                                                                                        tagtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTacac                                              <  1:597245/150‑1 (MQ=255)                                                                                                         agtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATT‑AA‑CAACCCCCTTTTTTTTTTTCGT‑GGGTTGTTTTTTTTATCTTTTTAGTGCTTTTTTTTTTCTTTCACCCT‑AACCGGGTCGGGGTTTGCATTCGtt                                                  >  2:560238/1‑145 (MQ=255)                                                                                                          gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATGAAA‑CACC‑CCCTTCTTATTTTCCGTGGGTTGGTTTTTTTC‑TCTTTTGTGGGCTTCTTTTTTACTTTCACCAT‑TAACCGTTCGGGGTTcttcttcgttttac                                              >  2:1123009/1‑135 (MQ=255)                                                                                                          gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTc                                           <  1:943299/151‑1 (MQ=255)                                                                                                          gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTc                                           <  1:114929/151‑1 (MQ=255)                                                                                                           tagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTAAATG‑AA‑AACCCCCCTTTTTTTTTTCAGT‑GGGTTGTTTTTTTCCTCTTTTTCGGGCTTCTTTTTTTCTTTCCCCCT‑AAACCGTTTGGGGTTTGCCTCCGTTTTACtt                                            >  2:103479/1‑149 (MQ=255)                                                                                                              gAGTGCCACCTTCCTTTTCAATAGTGGCGGGTATTTTTTACATG‑AG‑CAACACCCTTTTTTTTTTCAGG‑GGGTTGTTTTTTCCATTTTTTTAGTGGTTTTTTTTTTCTTTCACCATAAACAGGTTCGGG‑GTCGCTACCGTTTCACTTCCCTc                                       >  2:171208/1‑151 (MQ=255)                                                                                                                  gCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGt                                    <  1:1053042/150‑1 (MQ=255)                                                                                                                       cttccttTTCAATAGTGGCGGTAATTTTTTAAAAT‑AA‑CACCCCCCTTATTATTTTCAGT‑GGTTTGTTTATTTCATCTTTTGAGTGGTTTTTTTTTTCTTTCACCCT‑AAACCGTTCGGGGTTCGCATCCGCTATACTTCGCTCGGGAata                                >  1:630078/1‑149 (MQ=255)                                                                                                                          ccttTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCt                            <  1:1123153/150‑1 (MQ=255)                                                                                                                              ttCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGaaa                        <  1:288403/150‑1 (MQ=255)                                                                                                                               tCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAAt                       <  2:947258/150‑1 (MQ=255)                                                                                                                                       ggCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCa               <  1:54082/150‑1 (MQ=255)                                                                                                                                       ggCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAc              >  2:548031/1‑151 (MQ=255)                                                                                                                                       ggCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAc              <  2:284516/151‑1 (MQ=255)                                                                                                                                         cGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCg            <  1:1035969/151‑1 (MQ=255)                                                                                                                                          ggTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGt           <  1:92569/151‑1 (MQ=255)                                                                                                                                                  tataCATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAt    <  1:129201/150‑1 (MQ=255)                                                                                                                                                   ataCATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATgg  >  1:100822/1‑151 (MQ=255)                                                                                                                                                   ataCATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATg   <  1:923661/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                           AGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATG‑AA‑CACCTCCATTATTATTTCCAGT‑GGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCAT‑AACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGG  >  NC_000913/1413589‑1413885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑