Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	29,486	0	C	A	44.3%	75.7 / 38.2	61	intergenic (+291/‑165)	dapB/carA	dihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base C (26/8);  new base A (0/27);  total (26/35)
Fisher's exact test for biased strand distribution p-value = 1.63e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAA  >  NC_000913/29337‑29622                                                                                                                                                        |                                                                                                                                         ttttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCcac                                                                                                                                          <  2:122085/150‑1 (MQ=255) ttttGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCcac                                                                                                                                          >  2:218169/1‑150 (MQ=255)        gttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAaataa                                                                                                                                   <  2:218202/150‑1 (MQ=255)         ttttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAaataat                                                                                                                                  >  1:532852/1‑150 (MQ=255)         ttttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAaataat                                                                                                                                  >  2:450642/1‑150 (MQ=255)            tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAAtata                                                                                                                               >  2:855878/1‑150 (MQ=255)             aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATaaa                                                                                                                             <  2:351395/151‑1 (MQ=255)             aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATaa                                                                                                                              >  2:574285/1‑150 (MQ=255)              aTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATaaa                                                                                                                             >  1:188347/1‑150 (MQ=255)                gTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATaaaaa                                                                                                                           >  2:811176/1‑150 (MQ=255)                      tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCg                                                                                                                     <  1:593041/150‑1 (MQ=255)                      tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGc                                                                                                                    >  2:881276/1‑151 (MQ=255)                        cgACCATTTCGCCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAAGATG‑AATGAGCCACAAAATAATATAAAAAATccc                                                                                                                      >  1:524013/2‑147 (MQ=255)                            cttttGCTCCTTTTTTTTCTGCTTTTTTTTTTTTAATCAATTCTTCTTGCTGCGCAAGCGTTTTCCAAAACAGTTAAGATAATTTTTTTGTCGATAAATC‑CTTAAAAAAAAGG‑CGGGACCAAAAAAAAAATAAAAAAAACCCCGCCATTa                                                                                                               <  1:451519/148‑1 (MQ=255)                             aTTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTa                                                                                                               >  2:904640/1‑149 (MQ=255)                                        ttttttCTCCTCTTTTTTTTTTCATGAATTTTTCTTGCGGCGCAGGCTTTTCCAAAAACAGTTTAGATAATTTTTTTTTCGTTAAATG‑CCTGAAAAACATG‑CAGGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTa                                                                                                   <  1:403682/150‑1 (MQ=255)                                         tttttCTCCTTTTTTTTTTTTCATGCATTCTTCTGGCTGCGCAAGCTTTTCCAAGAATGGGTTAGATGTTTTTTTTGCCCCTAAATG‑CTTGAAAAACATG‑CATGAGCCACAAAAAAATAAAAAAACTCCCGCCATTAAGTTGACTTTTAg                                                                                                  <  2:852842/150‑1 (MQ=255)                                                gCTTGTTTTTATTTCATCCATTTTTTTTCCTGCGAGTGCTTTTCCAAGAACATGTTAGATGATTTTTTTGTCGCTTAATG‑CCTGAAAAACATG‑CAGGAGCAAAAAAATAAAATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                           <  2:117511/150‑1 (MQ=255)                                                 cTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                         >  2:31468/1‑151 (MQ=255)                                                    gTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                      >  1:308981/1‑151 (MQ=255)                                                     ttttttttCCATGCAATCTTTTTCCCCCCCACGTTTTTTCCAAAAAAGTTTAGTCTTTTTTTTTTTCGCTTAACG‑CCTGAAAAACATG‑CATGAGCCACAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcgc                                                                                               <  1:33549/141‑1 (MQ=255)                                                     tttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                      >  1:104864/1‑150 (MQ=255)                                                     tttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctc                                                                                      >  2:878254/1‑150 (MQ=255)                                                     tttttATTTCATGAAATCTTCTTGCGGCGAAAGCTTTTCCAAGAACGGTTTAGTTGTTTTTTTTTTCGTTTAATG‑CTTGAAAAACATG‑CATGGGCAAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                           <  2:130461/145‑1 (MQ=255)                                                      ttttCTTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                     >  1:357346/1‑150 (MQ=255)                                                            ttCATGCATTTTTCTTGCTGCGAAAGCTTTTTCAAAAACAGTTTAGATGATCTTTTTGTCGTTTAATC‑CCTGAAAAAAATG‑CAGGACCCAAAAAAAAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATg                                                                               <  1:839051/150‑1 (MQ=255)                                                            ttCATGATATTTTTTTCCTGCGAAAGTTTTTCCAAAAACATGTAAAATTATTTTTTTTTCTCTTAATC‑CCTGAAAACCATG‑CAGGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGaa                                                                                 <  1:466071/148‑1 (MQ=255)                                                             tCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgcc                                                                             >  2:835170/1‑151 (MQ=255)                                                               aTGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                           >  2:755138/1‑151 (MQ=255)                                                                taaaaTTTTCTTGCTGCGAAAGCTTTTCCAAAAACAGTTAAAATATTTTTTTTTCCGCTAATTC‑CCTAAAAAAAATG‑AATGAGCAACAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                              <  1:558900/144‑1 (MQ=255)                                                                     tcttctGCCTGCGCAAGCTTTTCCAAAAACAGGTAAGATAATCTTTTTGTCGC‑TAATGCCCGGAAAAACATC‑CACGGCCCACAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                      <  1:34105/150‑1 (MQ=255)                                                                           tgctgcGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGa                                                                >  1:925836/1‑150 (MQ=255)                                                                                cgcAGGCTTTTTCAAAAAAAGGTTAAATGTTTTTTTTTTCTTTTAATC‑CTTGAAAAACATG‑AATGAGCCAAAAAAAAAAATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAtt                                                            <  1:360374/149‑1 (MQ=255)                                                                                cgcAAGCTTTTTCCAAAACAGTTTAGATGTTTTTTTTGTCGCTTAATG‑CCTGAAAAACATG‑CATGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAtt                                                            <  2:390391/149‑1 (MQ=255)                                                                                 gcAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                         >  1:908758/1‑151 (MQ=255)                                                                                   aggttttttCAAAAACGGTTTAAATTATTTTTTTGTCGTTTAATT‑CCTGAAAAACAGG‑CATGACCCAAAAAAAAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                       <  1:751303/146‑1 (MQ=255)                                                                                        tttccaaaaaCAGGTTAGATATTTTTTTTGTCGTTTAATC‑CCTGAAAAACATG‑CATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                     <  2:477821/140‑1 (MQ=255)                                                                                         tttCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                 >  2:633674/1‑151 (MQ=255)                                                                                            caagaagaGTTTAGATGATTTTTTTGTCGTTTAATC‑CCTGAAAAACATG‑AATGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                  <  2:645279/145‑1 (MQ=255)                                                                                              aaaagaGGTTAGATTTTTTTTTTTTCTTTAAATG‑CCTAAAAAACAGG‑CATGCCCCAAAAAAAAATATAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAt                                             <  1:670427/145‑1 (MQ=255)                                                                                              aaaaaaGGTTAGATGTTTTTTTTTTCTTTTAATG‑CCTGAAAAACTGA‑CATGGGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                              <  2:38844/144‑1 (MQ=255)                                                                                              aGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                            >  2:367007/1‑151 (MQ=255)                                                                                                      ttAGATGATTTTTTTGTCGTTAAATG‑CCTGAAAAACATG‑CATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTg                                     <  2:309035/150‑1 (MQ=255)                                                                                                       tAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                   >  2:926649/1‑151 (MQ=255)                                                                                                        aaatgttttttttGTCGCTTAGTG‑CATGAAAAACTGG‑CAGGAGCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                   <  2:321500/142‑1 (MQ=255)                                                                                                         gatgatCTTTTTGTCTTTTAATG‑CCTGAAAAACATG‑CATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                   <  2:166638/149‑1 (MQ=255)                                                                                                              tCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                            >  2:502429/1‑151 (MQ=255)                                                                                                                ttttttTCTCTAAATG‑CCTGAAAAACTTA‑CATGACCCAAAAAAAAATAAAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtca                           <  1:121812/150‑1 (MQ=255)                                                                                                                ttttttTCGCTAAATG‑CCTG‑AAAACCTGACATGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtca                           <  1:73782/150‑1 (MQ=255)                                                                                                                tttttGTCGTTAAATC‑CCTGAAAAACATG‑CATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtca                           <  2:313760/150‑1 (MQ=255)                                                                                                                tttttGCCGCTTAACG‑CTAATAAAAACGG‑CATGAGCCAAAAAAAAAAATAAAAAACACCGCCATTAAGTTGACTTTTAGCGCCCATATTTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                            <  2:891158/149‑1 (MQ=255)                                                                                                                     gTCGTTTAATG‑CCTGAAAAACATG‑CGTGGGCCAAAAAAAAAAAAAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                      <  2:188383/150‑1 (MQ=255)                                                                                                                           ttattccttgaaaaaCATG‑CATAACCAAAAAAAAAAAATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                   <  1:602428/137‑1 (MQ=255)                                                                                                                             attccctaaaaaaCATG‑CATGCCCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGa                  <  1:267062/138‑1 (MQ=255)                                                                                                                             aatcccttaaaaaaaGG‑CATGAGCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                <  1:256669/140‑1 (MQ=255)                                                                                                                              tG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat            >  1:969088/1‑151 (MQ=255)                                                                                                                                 ccTGTAAAACATG‑CATGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat          <  1:913075/151‑1 (MQ=255)                                                                                                                                  ctatAAAACATT‑CATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata           <  1:385667/146‑1 (MQ=255)                                                                                                                                      aaaaCATG‑AATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGc        <  2:532944/148‑1 (MQ=255)                                                                                                                                         acaaagaatgACCCACAAAAAAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa     <  1:205786/142‑1 (MQ=255)                                                                                                                                         aCATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa   >  2:208970/1‑150 (MQ=255)                                                                                                                                          catg‑catgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaagt    >  1:680578/1‑146 (MQ=255)                                                                                                                                          catg‑catgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa  >  1:972297/1‑150 (MQ=255)                                                                                                                                                        |                                                                                                                                         TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTTAGATGATCTTTTTGTCGCTTAATG‑CCTGTAAAACATG‑CATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAA  >  NC_000913/29337‑29622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑