Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,563,402	C→A	intergenic (+285/‑190)	yffP → / → yffQ	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,563,402	0	C	A	100.0%	347.6 / NA	90	intergenic (+285/‑190)	yffP/yffQ	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (44/46);  total (44/46)

AGGCAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCCAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG  >  NC_000913/2563255‑2563547                                                                                                                                                    |                                                                                                                                                   aGGCAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCaaac                                                                                                                                                 >  1:141423/1‑151 (MQ=255)   gCAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCaaacaa                                                                                                                                               <  2:987254/151‑1 (MQ=255)    cAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCaaaca                                                                                                                                                >  1:512879/1‑149 (MQ=255)    cAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAg                                                                                                                                              <  1:215211/151‑1 (MQ=255)    cAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAg                                                                                                                                              <  2:982761/151‑1 (MQ=255)     aGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCaaaca                                                                                                                                                >  1:797049/1‑148 (MQ=255)      gTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCaaaca                                                                                                                                                >  1:207650/1‑147 (MQ=255)       ttAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATg                                                                                                                                           >  1:972810/1‑151 (MQ=255)       ttAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATg                                                                                                                                           >  1:268106/1‑151 (MQ=255)        tAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATgg                                                                                                                                          >  2:254711/1‑151 (MQ=255)          gCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATggg                                                                                                                                         >  1:342142/1‑150 (MQ=255)            aaCCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAgg                                                                                                                                      <  1:615529/151‑1 (MQ=255)             aCCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGt                                                                                                                                     <  2:14147/151‑1 (MQ=255)             aCCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAACAAACAAGATGGGAGGt                                                                                                                                     <  1:903569/151‑1 (MQ=255)                 aCCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAAt                                                                                                                                 >  2:432265/1‑151 (MQ=255)                  cccGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAAtt                                                                                                                                <  2:972228/151‑1 (MQ=255)                    cGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAAtttt                                                                                                                              <  2:304186/151‑1 (MQ=255)                     gggCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTt‑g                                                                                                                            <  2:1144272/151‑1 (MQ=255)                       gCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTt‑gtg                                                                                                                          <  1:262502/151‑1 (MQ=255)                        ccTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTt‑gtg                                                                                                                          >  1:521996/1‑150 (MQ=255)                        ccTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGa                                                                                                                         <  1:59008/151‑1 (MQ=255)                           ttCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGAt                                                                                                                        <  1:227854/149‑1 (MQ=255)                           ttCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGc                                                                                                                      >  1:159760/1‑151 (MQ=255)                              tcACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGc                                                                                                                      >  1:663336/1‑148 (MQ=255)                               cacaATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGa                                                                                                                   <  2:512612/150‑1 (MQ=255)                               cacaATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGAt                                                                                                                  <  2:957692/151‑1 (MQ=255)                                   aTCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCt                                                                                                              <  1:251882/151‑1 (MQ=255)                                   aTCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCt                                                                                                              >  2:267838/1‑151 (MQ=255)                                     ccccGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCttt                                                                                                            <  1:725675/151‑1 (MQ=255)                                      cccGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCtttt                                                                                                           >  2:757467/1‑151 (MQ=255)                                       ccGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCttttt                                                                                                          <  2:3737/151‑1 (MQ=255)                                        cGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTc                                                                                                         >  1:696371/1‑151 (MQ=255)                                          cTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTccc                                                                                                       >  2:5648/1‑151 (MQ=255)                                           tGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCt                                                                                                      >  2:515193/1‑151 (MQ=255)                                            gACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCtt                                                                                                     <  1:140208/151‑1 (MQ=255)                                              cATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCa                                                                                                   <  1:528451/151‑1 (MQ=255)                                                   tatCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCAt                                                                                              >  2:771752/1‑151 (MQ=255)                                                     tCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCAttt                                                                                            >  2:655875/1‑151 (MQ=255)                                                      cACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCAttt                                                                                            <  1:366449/150‑1 (MQ=255)                                                        cccATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTg                                                                                         <  1:381529/151‑1 (MQ=255)                                                         ccATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGt                                                                                        >  1:810215/1‑151 (MQ=255)                                                             ccttCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTa                                                                                     >  1:346148/3‑150 (MQ=255)                                                               ttCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAAtt                                                                                  >  1:238768/1‑151 (MQ=255)                                                                tCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAAtt                                                                                  <  2:868315/150‑1 (MQ=255)                                                                   gTTTTCAGGTGGAAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATtcaat                                                                              <  1:1155103/151‑1 (MQ=255)                                                                     tttCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATtcaatc                                                                             >  2:295147/1‑150 (MQ=255)                                                                        cAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACg                                                                         <  2:951289/151‑1 (MQ=255)                                                                        cAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACg                                                                         <  2:1131456/151‑1 (MQ=255)                                                                          ggTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGaa                                                                       <  1:175406/151‑1 (MQ=255)                                                                          ggTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGa                                                                        >  2:632502/1‑150 (MQ=255)                                                                            tGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGaa                                                                       >  2:699888/1‑149 (MQ=255)                                                                             gggAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAgg                                                                    <  2:1087708/151‑1 (MQ=255)                                                                             gggAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAg                                                                     <  2:629999/150‑1 (MQ=255)                                                                              ggAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGc                                                                   <  1:833439/151‑1 (MQ=255)                                                                                agaCTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAg                                                                 <  1:804996/151‑1 (MQ=255)                                                                                  aCTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGtt                                                               <  1:551829/151‑1 (MQ=255)                                                                                       tGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGCTGCAGATCGCTTTTTCCATTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCca                                                           >  1:596025/1‑150 (MQ=255)                                                                                        ggCCGCCGACGTTGCACATTTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCcaac                                                         >  2:325100/1‑151 (MQ=255)                                                                                          ccgccgACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCcaacaa                                                       <  2:904281/151‑1 (MQ=255)                                                                                            gccgACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCcaacaac                                                      >  2:1012429/1‑150 (MQ=255)                                                                                              cgACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACaaa                                                   <  2:261862/151‑1 (MQ=255)                                                                                               gACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACaaa                                                   >  1:512141/1‑150 (MQ=255)                                                                                                aCGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAAt                                                 >  2:655594/1‑151 (MQ=255)                                                                                                  gTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATaa                                               <  1:751271/151‑1 (MQ=255)                                                                                                  gTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATa                                                >  1:1150390/1‑150 (MQ=255)                                                                                                   ttggtgaaTTGATTACTTTCTGAACATTCATATCAGCTTCCTGAAAAGCAAACGATATGGGTGG‑GAATTTTGGTGATTGAGTGCGCTTTTACCCTGCATGCATTTTTGTTTAATTCAATCGACCAAAGGCAGGTTTGAACAACAAtata                                                >  2:496765/7‑149 (MQ=255)                                                                                                    tGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATaaa                                              <  2:797723/150‑1 (MQ=255)                                                                                                      cacaATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGAt                                           <  2:889824/151‑1 (MQ=255)                                                                                                      cacaATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGAt                                           <  1:1044992/151‑1 (MQ=255)                                                                                                        caATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATgg                                         >  1:153313/1‑151 (MQ=255)                                                                                                            tGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAgg                                     >  1:521748/1‑151 (MQ=255)                                                                                                              aTTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTa                                   <  2:521921/151‑1 (MQ=255)                                                                                                                tAATTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTaa                                  >  1:190465/1‑150 (MQ=255)                                                                                                                 aaTTTCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTaaa                                 >  1:355267/1‑150 (MQ=255)                                                                                                                    ttCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAt                              <  1:171642/150‑1 (MQ=255)                                                                                                                    ttCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAt                              <  2:809557/150‑1 (MQ=255)                                                                                                                     tCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATg                             >  2:328601/1‑150 (MQ=255)                                                                                                                     tCTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATg                             <  2:531650/150‑1 (MQ=255)                                                                                                                      cTGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                            >  2:272121/1‑150 (MQ=255)                                                                                                                       tGAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGaa                           >  2:183900/1‑150 (MQ=255)                                                                                                                        gAACATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                            <  2:490114/148‑1 (MQ=255)                                                                                                                         aaCATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAc                         <  1:151732/150‑1 (MQ=255)                                                                                                                         aaCATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACg                        <  2:546723/151‑1 (MQ=255)                                                                                                                          aCATTCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                            <  2:506064/146‑1 (MQ=255)                                                                                                                              tCAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg                    <  2:141407/150‑1 (MQ=255)                                                                                                                               cAAATCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTggg                   >  1:186309/1‑150 (MQ=255)                                                                                                                                aaaTCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                  >  1:234437/1‑150 (MQ=255)                                                                                                                                 aaTCAACTCCCACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                  >  2:152668/1‑149 (MQ=255)                                                                                                                                      aCTCCCACCAAAGCAAACAAGATGGGCGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCt           >  2:732261/1‑151 (MQ=255)                                                                                                                                         cccACCAAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCttt         >  2:292670/1‑150 (MQ=255)                                                                                                                                          ccaccaAAGCAAACAAGATGGGAGGTGAATCTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAc       >  2:984670/1‑151 (MQ=255)                                                                                                                                             ccaAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTgg    >  1:742718/1‑151 (MQ=255)                                                                                                                                              caAAGCAAACAAGATGGGCGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTgg    >  2:456226/1‑150 (MQ=255)                                                                                                                                              caAAGCAAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt   <  2:127659/151‑1 (MQ=255)                                                                                                                                               aaaGCAAACAAGATGGGAGGTGACTTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAAAAAAATAAAGATGGGAGGTAAAAATGAGACGGTGGGAAGTGGCTTTACTGGTg  >  2:334461/1‑151 (MQ=255)                                                                                                                                                    |                                                                                                                                                   AGGCAGTTAGCAACCTACCCGGGCCTTTCTCACAATCCCCGCTGACATTATATCACCCATCTTTCCGTTTTCAGGTGGGAGACTGATGGCCGCCGACGTTGCACAATTGATTAATTTCTGAACATTCAAATCAACTCCCACCAAAGCCAACAAGATGGGAGGTGAATTTT‑GTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTG  >  NC_000913/2563255‑2563547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑