Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,222,091 IS1 (+) +9 bp coding (389‑397/2187 nt) arpA ← ankyrin repeat protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)83 (1.330) 68/298 0.0 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4222099 0 (0.000)coding (389/2187 nt) arpA ankyrin repeat protein
* ? NC_000913 = 3584195NA (NA)70 (1.120) 63/298 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 4222091 = 0 (0.000)coding (397/2187 nt) arpA ankyrin repeat protein

Only 100 of 158 total aligned reads displayed.

CAGCTGAAGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATCGTAATTTC  >  NC_000913/4221941‑4222241
                                                                                                                                                      |                                                                                                                                                      
  gCTGAAGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAAttctt                                                                                                                                                      <  2:426857/151‑1 (MQ=255)
    ttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCtttt                                                                                                                                                    >  1:677169‑M2/147‑151 (MQ=255)
     gAAGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAAttctttt                                                                                                                                                    <  1:437962/150‑1 (MQ=255)
     gAAGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAAttcttt                                                                                                                                                     <  2:659466/149‑1 (MQ=255)
      aaGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAAttcttttt                                                                                                                                                   <  1:485014/150‑1 (MQ=255)
       agagTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAAttctttttct                                                                                                                                                 <  2:942021/151‑1 (MQ=255)
         aGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTg                                                                                                                                               <  1:622069‑M2/151‑2 (MQ=255)
            aaTCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtg                                                                                                                                            >  1:637928‑M2/1‑147 (MQ=255)
             atcatcTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtga                                                                                                                                           >  1:255228‑M2/1‑146 (MQ=255)
             atcatcTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtga                                                                                                                                           >  2:28978‑M2/1‑146 (MQ=255)
              taacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTAt                                                                                                                                          >  2:330796‑M2/137‑151 (MQ=255)
               catcTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatg                                                                                                                                         >  2:561540‑M2/1‑144 (MQ=255)
               aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATc                                                                                                                                         >  2:198669‑M2/136‑151 (MQ=255)
                   ttGATGGGGTTTGTAATAAACATTCTGATAAATATCATTAATATATTGGGCAGAAATGTTGCGGCATACAATACGTTTTGGGGTTCGCCCCGGAAAATAACATTGACCATTAATTTTAATTCTTGGGAAttcttttttttggt                                                                                                                                             <  1:556659/143‑4 (MQ=255)
                    tGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgc                                                                                                                                     >  1:957907‑M2/1‑139 (MQ=255)
                    tGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGACGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgcc                                                                                                                                    <  2:252369‑M2/151‑13 (MQ=255)
                    gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGAtt                                                                                                                                    <  2:703445‑M2/21‑1 (MQ=255)
                      aTGGGGATTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCACTGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgcca                                                                                                                                   <  1:913125‑M2/150‑14 (MQ=255)
                          ggTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaactt                                                                                                                               <  1:681513‑M2/150‑18 (MQ=255)
                          gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAgg                                                                                                                               <  2:310652‑M2/26‑1 (MQ=255)
                          gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAg                                                                                                                                <  1:190962‑M2/25‑1 (MQ=255)
                          gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGt                                                                                                                              >  1:85768‑M2/125‑151 (MQ=255)
                             ttGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttact                                                                                                                            >  2:201675‑M2/1‑130 (MQ=255)
                               agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAAt                                                                                                                         >  1:820580‑M2/120‑151 (MQ=255)
                                  aTCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgattt                                                                                                                       <  2:544345‑M2/150‑26 (MQ=255)
                                   cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCtt                                                                                                                     <  1:645790‑M2/36‑1 (MQ=255)
                                     aaCATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtg                                                                                                                   <  2:91851‑M2/151‑30 (MQ=255)
                                     aaCATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtg                                                                                                                   <  2:765627‑M2/151‑30 (MQ=255)
                                      ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGt                                                                                                                   <  1:435959‑M2/38‑1 (MQ=255)
                                      aCATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgt                                                                                                                  <  1:763584‑M2/151‑31 (MQ=255)
                                      aCATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgt                                                                                                                  >  2:287425‑M2/1‑121 (MQ=255)
                                         acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTAt                                                                                                               <  1:430564‑M2/42‑1 (MQ=255)
                                           ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCa                                                                                                             <  2:785857‑M2/44‑1 (MQ=255)
                                             gATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgat                                                                                                             >  1:972921‑M2/1‑114 (MQ=255)
                                                ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAgt                                                                                                        <  2:63731‑M2/49‑1 (MQ=255)
                                                 gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAgtg                                                                                                       <  1:286936‑M2/50‑1 (MQ=255)
                                                 aaTATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagagtatgatggtgtt                                                                                                       <  2:521156‑M2/151‑42 (MQ=255)
                                                      cATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                   <  1:116685‑M2/150‑46 (MQ=255)
                                                        gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGc                                                                                                <  1:804596‑M2/57‑1 (MQ=255)
                                                         tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGc                                                                                                <  2:479156‑M2/57‑1 (MQ=255)
                                                         tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTAAATCTTGGTTAATAAAGGgtg                                                                                                       >  1:819567‑M2/94‑143 (MQ=255)
                                                           gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGtt                                                                                             >  2:871213‑M2/92‑151 (MQ=255)
                                                             atatTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                           <  2:375398‑M2/151‑54 (MQ=255)
                                                              gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGa                                                                                           <  2:851329‑M2/62‑1 (MQ=255)
                                                                 tgtgCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                       <  1:372908‑M2/151‑58 (MQ=255)
                                                                 tgtgCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                       <  1:782529‑M2/151‑58 (MQ=255)
                                                                    gcagcaATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc                                                                                    <  1:789011‑M2/151‑61 (MQ=255)
                                                                      caaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAAtt                                                                                  <  2:651217‑M2/71‑1 (MQ=255)
                                                                      agcaATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                  <  1:508427‑M2/151‑63 (MQ=255)
                                                                        caATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTACTTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                <  2:488591‑M2/151‑65 (MQ=255)
                                                                        caATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                >  2:724253‑M2/1‑87 (MQ=255)
                                                                         aaTGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg                                                                               >  2:331477‑M2/1‑86 (MQ=255)
                                                                            gtgtCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                            >  2:778002‑M2/1‑83 (MQ=255)
                                                                              gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAg                                                                          <  2:901974‑M2/79‑1 (MQ=255)
                                                                                 gagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTa                                                                       <  1:523261‑M2/82‑1 (MQ=255)
                                                                                      gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTAttttt                                                                  <  2:174585‑M2/87‑1 (MQ=255)
                                                                                           acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAat                                                             <  1:145550‑M2/92‑1 (MQ=255)
                                                                                           aCGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                             >  1:704642‑M2/1‑68 (MQ=255)
                                                                                           aCGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                             >  2:658216‑M2/1‑68 (MQ=255)
                                                                                             ggTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                           >  2:651688‑M2/1‑66 (MQ=255)
                                                                                                tttGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt                                                        <  1:399798‑M2/151‑89 (MQ=255)
                                                                                                tttGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                         >  1:532604‑M2/1‑63 (MQ=255)
                                                                                                 tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTggg                                                       >  2:308619‑M2/54‑151 (MQ=255)
                                                                                                  tGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                      <  1:346016‑M2/151‑91 (MQ=255)
                                                                                                     cgggcattatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCa                                                    >  2:78102‑M2/50‑150 (MQ=255)
                                                                                                        cGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagtta                                                 >  1:141297‑M2/1‑55 (MQ=255)
                                                                                                         gCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact                                               <  2:319536‑M2/151‑98 (MQ=255)
                                                                                                           ttatctgaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTTAAATATTGGGGCAATGGttt                                             >  1:507373‑M2/44‑151 (MQ=255)
                                                                                                            ccGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                            >  2:211449‑M2/1‑51 (MQ=255)
                                                                                                              ggAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg                                          <  2:726517‑M2/151‑103 (MQ=255)
                                                                                                                 gaacataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGt                                         <  1:843908‑M2/112‑1 (MQ=255)
                                                                                                                     ataaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAgtgt                                   >  1:114791‑M2/34‑151 (MQ=255)
                                                                                                                       aaaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCg                                 >  1:87826‑M2/32‑151 (MQ=255)
                                                                                                                        aaacactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCgt                                <  2:837661‑M2/121‑1 (MQ=255)
                                                                                                                        aTTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                <  2:860627‑M2/151‑113 (MQ=255)
                                                                                                                          tGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta                               >  1:160944‑M2/1‑37 (MQ=255)
                                                                                                                           cactatcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGtt                             <  1:330782‑M2/124‑1 (MQ=255)
                                                                                                                              cATTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                          >  1:252364‑M2/1‑33 (MQ=255)
                                                                                                                               atcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTc                          <  1:285679‑M2/127‑1 (MQ=255)
                                                                                                                               atcaataagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCg                         <  1:470590‑M2/128‑1 (MQ=255)
                                                                                                                               aTTAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                          <  2:414183‑M2/150‑119 (MQ=255)
                                                                                                                                 tAAGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa                        <  2:218632‑M2/150‑121 (MQ=255)
                                                                                                                                  aaGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                       >  2:352933‑M2/1‑29 (MQ=255)
                                                                                                                                  aaGTTTAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                       <  2:143200‑M2/150‑122 (MQ=255)
                                                                                                                                     aagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGttttt                    <  2:823331‑M2/133‑1 (MQ=255)
                                                                                                                                     aagttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTtta                   <  2:609550‑M2/134‑1 (MQ=255)
                                                                                                                                      ttAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac                  <  2:815618‑M2/151‑127 (MQ=255)
                                                                                                                                      ttAATTCTTGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca                   >  1:851504‑M2/1‑25 (MQ=255)
                                                                                                                                        ttggagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTttatt                 >  2:821120‑M2/15‑150 (MQ=255)
                                                                                                                                           gagtcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTattaatt             <  1:291321‑M2/140‑1 (MQ=255)
                                                                                                                                              tcattaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATc          >  2:436590‑M2/9‑151 (MQ=255)
                                                                                                                                              tGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac          <  2:269822‑M2/151‑135 (MQ=255)
                                                                                                                                              tGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg             <  1:969206‑M2/148‑132 (MQ=255)
                                                                                                                                              tGGGAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcca             >  1:7670‑M2/1‑17 (MQ=255)
                                                                                                                                               gggAATTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac          >  1:74811‑M2/1‑16 (MQ=255)
                                                                                                                                                attaccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATCGt        <  2:203778‑M2/145‑1 (MQ=255)
                                                                                                                                                  aaTTCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc       <  2:749078‑M2/150‑138 (MQ=255)
                                                                                                                                                    ccCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATCGTAAtt    <  1:213743‑M2/149‑1 (MQ=255)
                                                                                                                                                     tCTTTTTCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg   <  2:175804‑M2/151‑142 (MQ=255)
                                                                                                                                                      ctttttcttttCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATCGTAAtttc  >  1:948175/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CAGCTGAAGAGTAATCATCTTGATGGGGTTTGTAATCAACATTCTGATAAATATCATTAATATATTGTGCAGCAATGTGTCGGCATACTATACGGTTTTGGGGTCGCCCCGGAAAATAACATTGACCATTAAGTTTAATTCTTGGGAATTCTTTTTCTTTTCTATCTGATTTTAGGTTTAATTCTTGTTTATCAAGAGTGTCTGAGCGTTGAGGTAAAATTTCCATTAGGTATTTTTCAAATATTGGGGCAATGGTTTGAGTAAGTGTCGTGTTTTCGTTTTTATTAATTATCGTAATTTC  >  NC_000913/4221941‑4222241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.