| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,506,028 | 0 | A | C | 43.2% | 139.6 / 11.0 | 74 | V18G (GTA→GGA) | ydcO | BenE family inner membrane putative transporter |
| Reads supporting (aligned to +/- strand): ref base A (39/3); new base C (0/32); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.31e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAA > NC_000913/1505883‑1506177 | gcgATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGcc > 2:1112056/1‑151 (MQ=255)gcgATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGcc > 1:60718/1‑151 (MQ=255) aTACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGcc > 1:303739/1‑148 (MQ=255) tACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGa > 1:522068/1‑150 (MQ=255) aCCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGaa < 1:318189/150‑1 (MQ=255) aaTGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCg > 2:1162047/1‑151 (MQ=255) aaTGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCg > 1:613630/1‑151 (MQ=255) tCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGcc > 1:8608/1‑149 (MQ=255) tCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCgt > 2:980890/1‑151 (MQ=255) aGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCgtgg > 1:1006999/1‑151 (MQ=255) tccTGCCGCCCATTCCCACCCCCGGCCCCGTCACCCACCCAGAGTTTTGGGGGGGGGTGCCCCGGGCGAAAACCGTTGTTTGCAAGTTTATGG‑CCGCTGAACTGGCTTAGCAAATA‑AATCCCGCCAGAAC‑CCCCGCCAGTAGCgtgggtg < 1:1012929/148‑1 (MQ=255) tACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCgtgggtgg > 2:342708/1‑151 (MQ=255) tGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTggagg > 2:248879/1‑151 (MQ=255) tGACCCCCTTGGCCACCCCCAGCCCCGTCACCCAGCCAGAGTTTTGTGCGGGGGTGGCCCCGGCGACAATCGCTGCTGCCCAAATTATTG‑CCGCTAACCGGGCTTAGCAAATT‑AATCCCCCCAGAAC‑CCCCGCCAGTAGCgtgggtg < 1:350530/147‑1 (MQ=255) cccccTTTGCCACCCCCGGCCCCTTCACCCAGCAAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGTTGCTTGCCATTTTTTGC‑CCGAGGAACGGGCGTAGCAAATA‑AATCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTggagga < 2:719461/147‑1 (MQ=255) cccccATCGCCACCCCCAGCGCCTTCACCCACCAAGAGTTTGGTGCAGGGGTGCCCCCGCCAACAACCCCTTCTTGCCAATTTATCG‑CCGCTGAACGGGCTTA‑CCAATTAAATCCCCCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGaa < 2:1241959/148‑1 (MQ=255) cGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAAt > 2:153380/1‑151 (MQ=255) ccctttcccgcccccAGCGCCCTCACCCAGCCAGATATTTGTGCAGTGGTGGCCCCGGCGACAATCGCTGCTGGCCAGATTTTTG‑CCGCTGAACGGGCGTACCAAATA‑AATCCCGCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATa < 2:968852/139‑1 (MQ=255) cccttcgccccccccGGCGCCTCCACCCACCAGGAGTTTTGGGCGGGGGGGGCTCCGGCAAAAACCGCTGCTTGCCATTTTATTG‑CCGCTGAACGGGGGTAGCAAATA‑AATCCCCCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAg < 1:1224370/140‑1 (MQ=255) ccATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCACTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAAt > 2:557671/1‑148 (MQ=255) cATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGa > 1:824410/1‑150 (MQ=255) ttGCCACCCCCAGCGCCGTCACCCGGCAAGAGATTTGTGCGGTGGGGGCCCCGGCAACATTCGCTGCTTGCCAGTTTATTG‑CCGTGGAACGGGCGTACCAAATA‑AACCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGaa < 1:1161926/149‑1 (MQ=255) ccAGCCCCACCGCCGTCACCCAGCCAGAGTTTTGTGCAGTGGGGCCCCGGGCGAAATTCGCTGTTTCCAAGATTTTTG‑CCGTTGAACGGGGGTAGCAAATT‑AATCCCGCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACa < 2:1131844/150‑1 (MQ=255) cgcccccGGCGCCGTCACCCACCAAGATTTTTGTGCGGGGGGGGCTCGGGCAAAAACCGCTGCTTGCAAGATTTTGG‑CGGTGGAACGGGGGAAG‑CAAAT‑AAAACCCCCAAAAACCCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGa < 1:267437/148‑1 (MQ=255) gCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGAc > 1:1214195/1‑150 (MQ=255) cccAGCCCCGCCACCCAGCCAGAATTTTGGGAAGGGGTGCCCCCGGCGACAACCGCTGCTTGCAATTTTATGG‑CCGAGAAATGGGCGAGGAAAATA‑AATCCCCCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGaaa < 1:103190/142‑1 (MQ=255) ccAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCAt > 1:435707/1‑151 (MQ=255) cGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCAcc > 1:294901/1‑151 (MQ=255) aTCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGt > 1:167431/1‑151 (MQ=255) ccagccagAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGc > 2:1253171/1‑151 (MQ=255) caagagTTTTGGGCGGGGGTGCCCCGGGCAACAACCGCTGCTTGCAAATTTTTTG‑CCGCTGACCGGGGGTAGCAAATA‑AATCCCGCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCg < 1:342673/142‑1 (MQ=255) cagAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTtat > 2:1251199/1‑151 (MQ=255) ttttgggctttggtggCTCCGGCGCCAACCGCTGTTGGCCA‑AATATTGCCCGCTAAACGGGCGTAGACATTA‑AACCCCGCAAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTtata < 1:1155008/137‑1 (MQ=255) tttggggggggggggCCCCGGCAAAAATCCCTGCTTCCCAGATTTTTG‑CCGCTAAACGGGGGTGGCAAATA‑AAACCCGCAAAAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCAc < 1:1190410/120‑1 (MQ=255) tttGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGt > 1:145252/1‑150 (MQ=255) tttGTGCAGTGGTGGCTCCGGCAACAATCGCTGCTTCCAAGTTTTTTG‑CCGCTAAACGGGCGTAGCAAATT‑AATCCCGCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAg < 1:895792/147‑1 (MQ=255) tttGGGCGGTGGTGCCCCCGGCAAAAATCGCTCCTTGCAAGTTTTTTG‑CCGCTGACCGGGCGAGGCAAATA‑AACCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTtata < 1:1111946/146‑1 (MQ=255) ttGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTAc > 1:252238/1‑151 (MQ=255) gtgCGGGGGTGCCCCCGGCGAAAATCGCTGCTTCCAAGATTTTTG‑CCGCTAAACTGGGGTAGCCAATT‑AATCCCGCCCGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACa < 2:766374/150‑1 (MQ=255) gtgCAGGGGGGGCCCCGGCAAAAACCGCTGCTTGCCAATTTATGG‑CCGCTGAACGGGCGTAGCAAATA‑AATCCCCCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTa < 2:1067397/148‑1 (MQ=255) gtggtgGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCAcc > 1:329202/1‑151 (MQ=255) ggggtggCCCCGGCAACAATCGCTGTTTGCAAGATTTTGG‑CCGTTGACCGGGGGTAGCAAATA‑AATCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCa < 1:402119/147‑1 (MQ=255) gggggggCCCCGGCGCAAACCGCTGCTTCCCAGATTATTG‑CCGCTGACCGGGGGTAGCAAATT‑AATCCCGCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAgg < 2:74840/142‑1 (MQ=255) gtggCTCGGGCGACAATCGCTGCTTGCCATATTTTGG‑CCGCTGAAGGGGCGTAGCAAATA‑AACCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTa < 1:1168686/151‑1 (MQ=255) tCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCAtt > 1:1112987/1‑151 (MQ=255) ccGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCAttt > 2:1044077/1‑151 (MQ=255) ccGGCAAAAACCGCTGTTTCCAAAATTATTG‑CCGCTGAACGGGCGTAGCAAATT‑AATCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCAttt < 2:32812/151‑1 (MQ=255) caaaaaTCGCTGTTTGCCAGATTTTTC‑CCGGAAAACGGGCGTAACCAATA‑AAAACCGCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGt < 1:749811/145‑1 (MQ=255) cGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTcc > 1:1205673/1‑151 (MQ=255) gACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCg > 2:958733/1‑151 (MQ=255) gACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCg > 2:843694/1‑151 (MQ=255) aaTCGCTGCTGGCCAGATTATTG‑CCGCTAAACGGGCGTAGCAAATT‑AATCCCGCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGtt < 2:60721/150‑1 (MQ=255) aaTCGCTGCTGGCAAGTTTATGG‑CCGTTGAGCTGGGGTAGCAAATA‑AAACCCGCCAAAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGtt < 1:598902/150‑1 (MQ=255) tCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTtat > 1:403175/1‑150 (MQ=255) ctgctTGCCAGATTATGG‑CCGCTGACCGGGGGTAGCAAATT‑AATCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTtata < 1:363802/148‑1 (MQ=255) ccAGATTATTG‑CCGCTGAACTGGCGTAGCAAATA‑AACCCCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGt < 2:1144884/151‑1 (MQ=255) aGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTg > 2:378858/1‑150 (MQ=255) tcattG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATa > 1:1122097/3‑150 (MQ=255) tG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACtt > 1:1109909/1‑151 (MQ=255) gagctgggcaatcaaaTT‑AATCCCCCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTc < 1:248854/131‑1 (MQ=255) aaCGGGCGTACCAAATT‑AACCCCGCCAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGtttt < 1:501549/150‑1 (MQ=255) ggCGTACCAAATT‑AACCCCCCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGc < 2:824483/148‑1 (MQ=255) ggggacccAATA‑AACCCCGCCAGAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCgga < 1:153367/145‑1 (MQ=255) gCGTAGCAAATA‑AATCCCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCgga < 2:522116/151‑1 (MQ=255) cGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCgg > 1:844846/1‑149 (MQ=255) gTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCggagg > 2:837590/1‑151 (MQ=255) tAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCggagg > 1:144589/1‑150 (MQ=255) tAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCggagg > 1:1017371/1‑150 (MQ=255) accaaaTT‑AACCCCGCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCggag < 2:145264/144‑1 (MQ=255) aaTT‑AATCCCCCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCgga < 2:349975/143‑1 (MQ=255) aaTCCCGCAAAAAC‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCggag < 2:1243823/140‑1 (MQ=255) aaTACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATgg > 2:260784/1‑151 (MQ=255) aTACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATgg > 2:376641/1‑150 (MQ=255) aTACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATgg > 2:779715/1‑150 (MQ=255) aCCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGaa > 2:143795/1‑150 (MQ=255) | GCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTGCAGTGGTGGCTCCGGCGACAATCGCTGCTTGCCAGATTATTG‑CCGCTGAACTGGCGTAGCCAATT‑AATACCGCCAGAAA‑CCCCGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAA > NC_000913/1505883‑1506177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |