| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,268 | 0 | T | A | 43.4% | 95.3 / 46.0 | 84 | L24F (TTA→TTT) | emrK | multidrug resistance efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base T (29/18); new base A (0/36); total (29/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACAC > NC_000913/2483118‑2483412 | gTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCaataaat < 1:535087/151‑1 (MQ=255) tCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCaataaata > 1:557333/1‑150 (MQ=255) tCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCaataaata > 2:1050209/1‑150 (MQ=255) aTCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACt > 1:256205/1‑151 (MQ=255) cTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTAc > 2:403010/1‑151 (MQ=255) ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTAcc < 1:895968/150‑1 (MQ=255) ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTAc < 1:858241/149‑1 (MQ=255) aTGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGc < 1:749005/150‑1 (MQ=255) aaCGACAGTGCCACTACCTGAGATTTGGGCAAAATTTGGTTCTGCATTCCCCGTGACATAGGCGTCATCTGTAATAATCATGTCTTCAAATCCCATTAACAAAAAGGCATGGCCACCTAAAACCGAAAAAAAAAAAACTCCCGCCAATaaa < 1:132788/151‑1 (MQ=255) aCAGTGACACTCCCTGAGATTTGTGAAAAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATCCCATTGACAAATAGGAATAGCCCCCTAAAACCGAAAAAAAAAAAACTACCGCCAATAAAGa < 1:1167766/149‑1 (MQ=255) aCAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACAAATAGGCATAGGCACCTAAAAACGCAAAAAAAAAAACTACCGCCAATAAAGaaa < 2:886676/151‑1 (MQ=255) aGTGACACTACCTGAGATTTGTGCAAAAATTGGATCTGCATCCCCCGTGACATAGGCGTCATCTGTACAAATCATGTCTTCTAATCCCATTGACAAATAGGAAAAGGCCCCTGAAAACGAAATAAAAAAAACTACCGCCAATAAAGaaa < 1:1109046/149‑1 (MQ=255) aGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGaaa > 2:695842/1‑149 (MQ=255) cccTACCTGAGACTTGTGAAAAAATTGGATCTGCATTCCCCGTGACATGGCCGTCATCTGTACTAATCATGTCTTCTAATCCAATTGACAAAAAGGCAAAGCCACCGAAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTAttt < 2:969689/149‑1 (MQ=255) cacTACCTGAGATTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCCCCTAAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTa < 2:154615/148‑1 (MQ=255) acTCCCTGGGATTTGTGCAAAAATTGGATTAACTTCCCCAGTGACATGGCCCTCTTCTGTACTAATCTTGTTTTCTAATTCCATAAACCAATAGACATAGTCCCGAGAAACCTCAAGAGAAAAACCTACCGCCAATAAAGAAAAGTAttt < 2:767645/150‑1 (MQ=255) ccTGAGATTTGTGAAAAAATTGGTTCTGCATCCCCCGTGACATAGGCGTCATCTGTACAAATCATGTCTTCAAATTCCATTGACAAATAGGAATAGGCACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTttctt < 1:817362/150‑1 (MQ=255) ccTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTttctt < 2:1019304/150‑1 (MQ=255) ccTGAGACTTGTGCAAAAATTGGTTCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTAttt < 2:557384/146‑1 (MQ=255) ccTGAGACTTGTGCAAAAATTGGATCTGCATTCCCCGTGACATAGGCTTCATCTGTACAAATCATGTTTTCTAATCCCATTGACAAATAGAAATAGGCACCTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTttctt < 1:585268/150‑1 (MQ=255) gatttGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAACCGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGtt < 2:1156254/147‑1 (MQ=255) gaCTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTTTTCTAATTCCATTGACCAATAGGCAAAGGCACCTAAAACCGCAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGtt < 2:725750/150‑1 (MQ=255) ttgtcaaGAAATTGGACCTCGTTCCCCCGTAACATGGGCGTATTCTGCACTAACCTTGTTTTTTAATTCCATGGCCAAATAGGCAGAGGCCCGTGAAAACACAATAAACAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAg < 1:611472/143‑1 (MQ=255) ttGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGa > 2:1070878/1‑150 (MQ=255) ttGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGa > 1:615636/1‑150 (MQ=255) gtgCAAAAATTGGATCTTCATTCCCCGTGACATAGGCGTCATCTGTACAAATAATGTCTTCAAATCCCATGCACCAAAAGGCATAGCCACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAAt < 1:762416/150‑1 (MQ=255) tgaaaaaaTTGGATCTCCATCCCCCGTGACATAGGCCTCTTCTGAACCAACCATGTTTCCAAATACCATTCACCAATAGGCATAGGCCCTTGAAACCTAAATAAAAAAAATTCCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGaa < 1:355045/143‑1 (MQ=255) aaaaaTTGGATCTGCTTCCCCCGTGACATAGGCGTCATCTGTACTAATCATTTCTTCTAATCCCATTGCCAAAAAGGCATAGCCCCCTAAAACCGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGt < 1:1070771/146‑1 (MQ=255) aGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTATAATTCCATTGACCAATAGGAATAGGCACCTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGt < 1:659019/148‑1 (MQ=255) aaaTTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTTTTCTAATCCCATTGACCAATAGGCATAGCCACCTAAAAACGCAAAAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGttttt < 2:1107970/150‑1 (MQ=255) aaaTTGAATCTCCATCCCCCGTGACATAGGCGTCATCTGTACTAATAATGTCTTCAAATTCCATTGACCAAAAGGCATAGGCACCTAAAAACGAAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttttt < 1:796355/151‑1 (MQ=255) tgaaTCTGATTTCCCCGTGACATCGGCTTAATCTGTAACAACCATGTCTAATAATACCATCTACAAATAGACATAGCCACCTTAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTAt < 2:954935/146‑1 (MQ=255) ggATCTGCATCCCCCGTGACATAGGCGTCATCTGTACTAATCATTTTTTATAATTCCATTAACAAATAGGAATAGCCACCTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTg < 1:178016/151‑1 (MQ=255) gATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTg > 2:82499/1‑150 (MQ=255) cTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAtt > 2:274142/1‑151 (MQ=255) ttCCCCGTAACATAGGCGTCATCTGTACTAATCATTTCTTCTAATCCCATTGACAAATAGGCATAGGCCCCTAAAAACGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAtt < 1:480433/146‑1 (MQ=255) ttCCCCGTAACATAGGCGTCATCTGTACTAATCATGTCTTCAAATCCCATTGACCAATAGGCATAGGCACCTGAAAACGCAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATc < 1:512891/150‑1 (MQ=255) gTGACATAGGCGTCATCTGTACTAATCATTTCTTCAAATCCCATTGCCCAATAGGCATGGGCACCTAAAAACGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCa < 2:252913/151‑1 (MQ=255) tGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCAc > 1:1123116/1‑151 (MQ=255) aCATAGGCGTTATCTGTACAAATAATTTCTACTAATCCCATTGACCAATAGCAATAGCCACCTAAAAACGAAAAAAAAAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt < 1:201735/150‑1 (MQ=255) aCATAGGCGTCATCTGAACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAACACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt > 2:1005810/1‑150 (MQ=255) agaGGCGTCATCTGTACTAATCATGTCTTTAAATTCCATGGCCCAAAAGGAATAGGCACCTGAAAACGCAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatt < 1:695781/149‑1 (MQ=255) aTAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGCCCAATAGGCATAGGCACCTAAAACCGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatt < 2:466552/151‑1 (MQ=255) aGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat > 1:670835/1‑151 (MQ=255) tCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAACCGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctct < 2:424260/150‑1 (MQ=255) cATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctctc > 1:169677/1‑150 (MQ=255) aTCTGTACAAATCATTTCTTCAAATCCCATTACCAAATAGGAATAGCCACCTGAAAACGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctc < 1:1184093/147‑1 (MQ=255) tAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt > 2:38459/1‑150 (MQ=255) tAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt > 2:236918/1‑150 (MQ=255) aataatGTCTTCTAATTCCATTGCCAAATAGGAATAGGCACCTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATa < 1:756862/150‑1 (MQ=255) aaTCATTTTTTCAAATTTCATTGACAAATAGAAATAGGCCCCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAt < 1:932237/142‑1 (MQ=255) aaTCATTTCTTCTAATCCCATTGCCAAATAGGCATAGGCCCCTAAAAACGCAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctctc < 2:30469/140‑1 (MQ=255) aaTCATGTTTTCTATTTCATTTGACCAATAGGCATAGGCACCTAAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCa < 1:1165482/148‑1 (MQ=255) aaTCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt < 2:66583/149‑1 (MQ=255) aaTCATGTCTTCAAATTCCATTGACAAATAGGCATAGGCCCCTAAAAACGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCa < 1:889904/148‑1 (MQ=255) aTCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt > 1:674164/1‑148 (MQ=255) atttcttcaAATTCCATTGACCAATAGGCATAGGCCCCTGAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGAt < 1:462663/146‑1 (MQ=255) tGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATg < 2:352594/149‑1 (MQ=255) tGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTAAAAACGAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGa < 2:348830/150‑1 (MQ=255) ctAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAt > 1:708060/1‑151 (MQ=255) aaTTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtg > 2:9812/1‑150 (MQ=255) aaTTCCATTGACAAATAGGAATAGGCACATAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAt < 1:327944/149‑1 (MQ=255) aaTTCCATTGACAAAAAGGCATAGGCACCTAAAAACGCAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAt < 1:491798/145‑1 (MQ=255) aaTTCCATTGACAAAAAGGAATAGGCACCTAAAACCGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTa < 1:908342/148‑1 (MQ=255) tCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaatt > 1:99454/1‑151 (MQ=255) tCCATTGACCAATAGGCAGAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGGATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaatt > 1:445981/1‑151 (MQ=255) cATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg > 1:159580/1‑150 (MQ=255) cATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg > 1:994649/1‑150 (MQ=255) cATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg > 2:1132939/1‑150 (MQ=255) aataggaataggCACTTGAAAACGAAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAag < 1:1167970/151‑1 (MQ=255) aaTAGGCATAGGCCCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAag < 2:99460/151‑1 (MQ=255) aaTAGGCATAGGCACCTGAAAACGCAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGaaaa < 2:615691/150‑1 (MQ=255) aaaggcataggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAaga < 1:1077850/149‑1 (MQ=255) aaagaaataggcaTGTGAATACGAAATAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGaaaa < 1:759540/143‑1 (MQ=255) ataggcttttGAAAACGAAATAAATAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAagagag < 1:901617/139‑3 (MQ=255) ataggccCCTAAAAACAAAATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc < 1:402969/151‑1 (MQ=255) ataggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc > 2:500715/1‑151 (MQ=255) ataggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc > 1:699093/1‑151 (MQ=255) taggcaCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc > 2:871028/1‑150 (MQ=255) ggcaCTTAAAAACGAAAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcatt < 1:639466/147‑1 (MQ=255) ccccTAAAACCACAATAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattcatt < 1:633306/147‑1 (MQ=255) aCCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttctt > 2:16525/1‑151 (MQ=255) gAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCat > 2:462880/1‑150 (MQ=255) gAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCat > 1:640546/1‑150 (MQ=255) gAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCat > 1:541342/1‑150 (MQ=255) aaaaCGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCatat > 2:333319/1‑151 (MQ=255) aaaaCCAAATAATAAAACCAACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattcatt < 1:1005710/143‑1 (MQ=255) aataaaaaAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAac < 1:148183/149‑1 (MQ=255) aaaaaaaaaaaCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAacac < 2:351482/148‑1 (MQ=255) taaataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAacac > 2:727181/1‑149 (MQ=255) taaataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAacac > 2:890221/1‑149 (MQ=255) | GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACAC > NC_000913/2483118‑2483412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |