Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	357,880	0	T	C	65.2%	2.4 / 43.9	46	K271E (AAA→GAA)	cynR	transcriptional activator of cyn operon; autorepressor
Reads supporting (aligned to +/- strand):  ref base T (11/5);  new base C (0/30);  total (11/35)
Fisher's exact test for biased strand distribution p-value = 3.27e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.15e-07

ACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAG  >  NC_000913/357730‑358025                                                                                                                                                            |                                                                                                                                                   aCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTAttttt                                                                                                                                                    >  2:1218880/1‑151 (MQ=255)    cGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTccg                                                                                                                                                 <  1:180967/151‑1 (MQ=255)     gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTccgc                                                                                                                                                >  1:1254192/1‑151 (MQ=255)       aGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTccgccg                                                                                                                                              >  2:604139/1‑151 (MQ=255)       aGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTccgccg                                                                                                                                              >  2:145744/1‑151 (MQ=255)         gCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGca                                                                                                                                            <  1:302631/151‑1 (MQ=255)                aaGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑c                                                                                                                                    <  1:527466/151‑1 (MQ=255)                            tCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTtctctc                                                                                                                        >  2:1002227/1‑151 (MQ=255)                               gcaaaTCCCAGCCGAGGCCTTGTGTCAGCGGCTCCCGTGA‑TTCATTCCCGCAAA‑CACCCGCGCTTTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTC‑CGCGGCGGCTGTCTGCAAGTTATTTTTCCGCCGCAAAAAAA‑ccgccg                                                                                                                               <  1:1185898/138‑1 (MQ=17)                                    tcccACCCGCAGCCTGGTGCCGGGGGCTACGGTGT‑TTATTTCCCGCAAA‑AACCCGCGCTTTTA‑CCCAACCCC‑TTGTAAAAAAATGCTTC‑CGGGGGGGCTGTCGGCCAGTTTTTTTCCCGCCGAAACAAAA‑CCGCCGTTCTCTCCagtagt                                                                                                                 <  2:1211666/148‑1 (MQ=255)                                     tCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTgg                                                                                                               >  1:851415/1‑151 (MQ=255)                                      ccggCCGGAGCCTTGTGCCGGCGGCTACCTTGA‑TTTTTTCCCCCAAA‑CACCCGCACATTTA‑CCCACCCCC‑TTTGGAAAAATTGCCTC‑CGCGGCGGCTGTCTGCAAGTTTTTTTCCCGCCCCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTg                                                                                                                <  2:1015942/146‑1 (MQ=255)                                       cAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCg                                                                                                             >  2:998059/1‑151 (MQ=255)                                        aGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCgg                                                                                                            >  2:97630/1‑151 (MQ=255)                                          ccGCAGCCCTGGGCCAGCGCCTACCGTAT‑TTCTTTCCCCCCAA‑CACCCGCGCTTTTA‑CCCACCGCC‑ATGTGAAAAAATCCCTC‑CGGGGCGGTTGTCTCCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCggg                                                                                                           <  2:642170/150‑1 (MQ=255)                                          ccGCAGACCTGT‑TCAGCCGGAACCCTTATTTCATTCCCGCAAA‑CACCCGCG‑ATTTACCCCAACGCA‑AGGTAC‑AAAATGCCTTGCGCGGGGGCTGTCTGCAACCTATTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCgggg                                                                                                          <  2:1198551/151‑1 (MQ=255)                                           cgcaacctggtgcCAGCGGCTCCCGTTT‑TTCATTCCCCCCAA‑CACCCGCGCTTTAA‑CCCAACGCC‑TTGTAAAAAAATCCCTC‑CGCGGCGGCTGTCGGCCAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCgggg                                                                                                          <  1:1209561/141‑1 (MQ=255)                                           cgaagcccTGTGTCAGGGGCTCCCGTGT‑TTCTTTCCCGCCAC‑CACCCGCGCTTTTA‑‑CCAACCCCAATGTGAAAAATTGCCTC‑CGGGGCGGCTTTCTGCTAGTTTTTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGc                                                                                                         <  2:1139967/145‑1 (MQ=255)                                             cggccgtttgccggCGTCTACCGTAA‑TTCTTTCCCCCCAC‑CACCCGCGTTTTTA‑CCCACCCCC‑ATGAGAAAAAAGGCCTC‑CGGGGGGGTTTTCTGCCAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGc                                                                                                         <  1:922202/136‑1 (MQ=255)                                               gACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCgg                                                                                                            >  2:187327/1‑144 (MQ=255)                                                        cggcgcCTACCGTAA‑TTCTTTCCCCCCAA‑CACCCCCCCTTTTA‑TCCAACCCA‑ATGTGCAAAAATGCCTT‑CGGGGCGGCTGTCGGCCCGTTATTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAg                                                                                              <  2:515583/147‑1 (MQ=255)                                                            gcctccgttGA‑TTCTTTCCCCCCAA‑CACCCCCGCATTTA‑CCCACCGCC‑ATGTGAAAAAATCCCTC‑CGCGGCGGTTTCCGGCCAGTTTTTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATa                                                                                               <  1:115389/136‑1 (MQ=255)                                                            gcctcccGTGA‑TTCTTTCCCCCCAA‑CACCCGCGCTTTTA‑CCCACCGCC‑ATGTGAAAAAATGCCTC‑CGGGGGGGCTGTCTGCCAGCTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCt                                                                                            <  2:825477/142‑1 (MQ=255)                                                               tACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGAGAAAAAGAttt                                                                                          >  1:584735/1‑146 (MQ=255)                                                                cccGTGT‑TTCTTTCCCCCCAA‑CACCCGCCCTTTTA‑‑CCAACCCCAAGGTGAAAAAATCCCTC‑CGGGGGGGCTGTCGGCAAGTTATTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGccc                                                                                    <  1:139969/150‑1 (MQ=255)                                                                cccGTGT‑TTC‑TTTCCCCCAACCACCCGCGCTTTTA‑CCCACCGCC‑TGGTAAAAAAATGCCTC‑CGGGGCGGTTGTCGGCAAGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGc                                                                                      <  1:1061724/148‑1 (MQ=255)                                                                aCCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGGAGAGAAAAAAATTTaaaacc                                                                                    >  2:556077/1‑147 (MQ=25)                                                                 ccGTGT‑TTTTTTCCCCCCAA‑CACCCGCGCATTTA‑CCCAACGCC‑ATGTGCAAAAATGCCTC‑CGGGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGccc                                                                                    <  2:159503/150‑1 (MQ=25)                                                                 ccGTGA‑TTCTTTCCCCCCAA‑CACCCGCGCATTTA‑CCCACCGCC‑TTGTGAAAAAATGCCTT‑CGCGGCGGCTGTCGGCCAGTTTTTTTTCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGc                                                                                      <  2:788332/148‑1 (MQ=255)                                                                    tGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGGCAGAGgaaaaagttt                                                                                          >  2:592861/1‑134 (MQ=25)                                                                     gA‑TTCTTTCCCCCCAA‑CACCCGCCTATTTA‑CCCACCCCC‑AGGTCCAAAAAGCCCTC‑CGGGGGGCTTGTCCGCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGt                                                                                  <  1:171552/148‑1 (MQ=255)                                                                        ttCTTTCCCGCAAA‑CACCCGCGATTTTA‑CCAAACGCC‑ATGTGAAAAATTGCCTC‑CGGGGGGGTTGTCGGCCACTTATTTTCCCCCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCAtg                                                                              <  2:452240/150‑1 (MQ=255)                                                                              ccccccAA‑CACCCCCCCTTTTA‑CCCACCGCC‑ATGTGAAAAAATCCCTC‑CGCGGCGGCTGTCTGCAAGCTTTTTTCCCGCCAAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTtgtgtg                                                                       <  1:556026/147‑1 (MQ=255)                                                                                        acccGCGCATTTA‑CCCACCGCA‑ATGTGAAAAAATCCCTT‑CGGGGCGGTTGTCTCCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATc                                                                 <  2:845587/146‑1 (MQ=255)                                                                                                 tttA‑TCCACCGCC‑ATGAAAAAAAGTCCCTG‑CGCGGGGGTTTCCGCCCAGTTTTTTTCCCCCCACAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGt                                                        <  1:786247/148‑1 (MQ=255)                                                                                                       ccACCGCC‑ATGTGAAAAAATGCCTC‑CGCGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAAt                                                  <  1:370226/149‑1 (MQ=255)                                                                                                       ccAACGCC‑ATGTGAAAAAATGCCTC‑CGCGGCGGCTGTCTGCCAGCTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACaa                                                   <  2:954857/148‑1 (MQ=255)                                                                                                           cGCC‑ATGTAAAAAAATGCCTT‑CGGGGCGGCTTTCTGCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGACAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAAtgt                                                <  2:14748/147‑1 (MQ=255)                                                                                                             cc‑ATGTGAAAAAAGCCCTC‑CGCGGCGGCTGTCGGCCAGTTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGaaa                                           <  2:449158/150‑1 (MQ=255)                                                                                                                      aaaaaTGCTTG‑CGTGGCGGATGACTGCAACAAATTTTCCCGCCGAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAg                                     <  2:462029/148‑1 (MQ=255)                                                                                                                      aaaaaGGCCTG‑CGCGGCGGCTTTCTCCCATCTTTTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGt                                    <  1:568480/149‑1 (MQ=255)                                                                                                                         aaaccctcccgcgCCGGTTGTCAGCCGTTTTTTTTCCCCCCCCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTgcgg                                <  1:278901/142‑1 (MQ=255)                                                                                                                                   gggggggcTGTCGGCCGGTTTTTTTCCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATc                          <  2:1066980/142‑1 (MQ=255)                                                                                                                                       cggcTTTCCGCCAGCTATTTCCCCGCCACAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCa                   <  1:812295/150‑1 (MQ=255)                                                                                                                                              cTGCCAGTTTTTTTCCCCCCCCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAg                  <  1:1143432/144‑1 (MQ=255)                                                                                                                                               ggccggttATTTTCCCGCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAAc               <  1:1218756/139‑1 (MQ=255)                                                                                                                                                 ccAGTTTTTTTCCCGCCGAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAAcc              <  1:145731/145‑1 (MQ=255)                                                                                                                                                  ccactttttttCCCACCCAAAAAAACCCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTa        <  1:1002127/145‑1 (MQ=255)                                                                                                                                                     tatttttcCCGCCGAAAAAAAC‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCa                         <  1:1230355/127‑1 (MQ=255)                                                                                                                                                      ttttttcCCGCCAAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTaa       <  1:1064137/145‑1 (MQ=255)                                                                                                                                                      ttttttcCCCCCGAAAAAAAT‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAAt      <  1:899604/146‑1 (MQ=255)                                                                                                                                                       tttttcCCCCCGCAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTg    <  2:551856/148‑1 (MQ=255)                                                                                                                                                        ttttcCCGCCGAAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGa   <  2:25172/149‑1 (MQ=255)                                                                                                                                                        ttttcCCGCCGAAAAAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAg  <  2:694655/150‑1 (MQ=255)                                                                                                                                                            |                                                                                                                                                   ACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGGCTACCGTGA‑TTCATTTCCGCCAA‑CAACCGCGCATTTA‑TCCAACGCC‑ATGTGCAAAAATGCCTT‑CGCGGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAA‑CCGCCGTTCTCTCCAGTAGTGGCGGGGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAG  >  NC_000913/357730‑358025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑