| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 44 (0.790) | 36/298 | 0.9 | NA | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1929874 = | NA (NA) | intergenic (‑167/+160) | yebE/yebF | DUF533 family inner membrane protein/extracellular Colicin M immunity family protein | |||||
AAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397091‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGA > NC_000913/1929874‑1930019 AAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTA < 2:466073/151‑1AAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTT > 1:558261/1‑150AAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCT < 2:571614/149‑1 AAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGG < 1:92497/151‑1 AACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGT > 2:656246/1‑151 GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAA < 1:15348/151‑1 ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGT > 2:771650/1‑149 ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGT > 1:579479/1‑149 AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTT < 2:473339/151‑1 AATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCATTAGGTGAAAGTAGTTTGTCGTTTT > 1:443550/1‑151 CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTG < 2:820072/151‑1 AAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGC > 2:171310/1‑151 CGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTG < 1:397348/149‑1 CGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTG > 2:397395/1‑149 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTG > 1:483868/1‑150 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTG > 1:268068/1‑150 AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCTGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGC > 2:680579/1‑151 AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGC < 1:360221/151‑1 GGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATT < 1:32487/151‑1 GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGC < 2:880749/149‑1 CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGAT < 1:504034/150‑1 CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGAT < 2:487890/150‑1 GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCGCCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGA < 1:268608/151‑1 GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCG > 2:511441/1‑150 CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACG > 2:137403/1‑151 CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGAC > 2:7496/1‑150 CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTG < 1:137849/151‑1 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCT < 2:346592/151‑1 ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAG < 2:646885/151‑1 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCT > 2:455968/1‑150 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGA < 1:584606/151‑1 ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGG > 2:534979/1‑151 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGG > 2:39730/1‑150 CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAG < 2:417119/150‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGC > 1:54129/1‑151 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCAC > 1:9389/1‑151 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACT > 1:538012/1‑151 AATTTCCCCGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCTGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCG > 2:10803/1‑151 CGCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCC < 1:805557/151‑1 GCTTATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCA < 1:518471/151‑1 ATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACA < 1:365497/150‑1 ATTCGCACCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACA < 1:285785/150‑1 CCTTCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCG > 1:873126/1‑151 TCCTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGA < 2:137989/149‑1 AAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1397091‑1397238‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGA > NC_000913/1929874‑1930019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |