Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913753,1250TA42.0% 165.7 / 60.7 113intergenic (‑330/+60)ybgD/gltAputative fimbrial‑like adhesin protein/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (52/13);  new base A (0/47);  total (53/60)
Fisher's exact test for biased strand distribution p-value = 5.84e-20
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

CATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGC  >  NC_000913/752976‑753272
                                                                                                                                                      |                                                                                                                                                   
cATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCatat                                                                                                                                                     >  2:1152091/1‑150 (MQ=255)
cATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCatat                                                                                                                                                     >  2:219634/1‑150 (MQ=255)
 aTTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCAtata                                                                                                                                                    >  2:697132/1‑150 (MQ=255)
  ttttCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaa                                                                                                                                                   >  1:700356/1‑150 (MQ=255)
  ttttCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaa                                                                                                                                                   <  2:148319/150‑1 (MQ=255)
   tttCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaa                                                                                                                                                  <  1:934629/150‑1 (MQ=255)
    ttCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaa                                                                                                                                                 >  1:18102/1‑150 (MQ=255)
      cATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAAt                                                                                                                                               <  2:887485/150‑1 (MQ=255)
      cATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATc                                                                                                                                              <  2:1260104/151‑1 (MQ=255)
       aTAGGGTTATAAATGCGACTTCCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGACTGTTAATGGATTTTATGTTTACAATTTTTTGTGTTTAGGCATATAAAAATc                                                                                                                                              <  2:309714/150‑1 (MQ=255)
       aTAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCa                                                                                                                                             <  1:271819/151‑1 (MQ=255)
            gTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                        <  1:1043279/151‑1 (MQ=255)
                     gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGa                                                                                                                                >  2:241010/1‑150 (MQ=255)
                      cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAc                                                                                                                              >  2:399582/1‑151 (MQ=255)
                      cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAc                                                                                                                              >  2:191882/1‑151 (MQ=255)
                       gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAcg                                                                                                                             >  1:145723/1‑151 (MQ=255)
                            ccATGAAGTTTTTAATTAAAAGTATTGGGTTGCTGATAATTTGAGTTGTTCTTTTTTTTTTAAATTTTTATATAGGTCTGTTAATGGATTTTATTTTTAAATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAAcggcg                                                                                                                          <  1:842521/149‑1 (MQ=255)
                              atgtatttttaAATTGAAATTATGGGGTGGCTAAAAATTTAAGCTGTTTTTTTTTTTTAAAATTTCTATATGGTTTTTTTAATGGTTTTTATTTTTTAAATTTTTTGTGTTAGGGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGt                                                                                                                       <  1:969507/144‑1 (MQ=255)
                              aTGAATTTTTTAATTGAAATTATTGGTTTGTTAATATTTTGAGTTTTTTTTTTTTTTTAAAATTTCTATATGGTTTTGTTATTGGTTTTTATTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGtt                                                                                                                      <  1:894837/151‑1 (MQ=255)
                                gAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGtt                                                                                                                      >  2:1115/1‑149 (MQ=255)
                                 aaGTTTTAAATTGAAAGTTTGGGGTTGCTGATATTTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTCTGTAAAGGTATTTTTTTTTTACAATTTTTTGTTTTAAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTaa                                                                                                                    <  1:883792/150‑1 (MQ=255)
                                 aaGTTTTAAATAGAAATTATTGGGTTGCTGATAATTTGAGTTTTTTTATTTTTTTTAAATATCTATATGGGTTTTTTAATGGATTTTTTTTTTAAATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGtt                                                                                                                      <  1:1033987/148‑1 (MQ=255)
                                    tttttAATTGAAAGTTTTGGTTTGCTGAAAATTTGAGTTTTTCTTTTCTTTTAAAATATCTATATAGTTCTGTTAATGGATTTTTTTTTTACAATTTTTTGTGTTAAGGCAAATAAAAATCACCCCGCCATATGAACGGCGGGTTaaaa                                                                                                                  <  2:1297223/149‑1 (MQ=255)
                                    tttttAATTAAAAGTATTGGGTTGTTAATATTTTGAGCTTTTCTTTTTTTTTAAAATATTTATATAGGTTTGTTAATGGATTTTATTTTTAAATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTaaaa                                                                                                                  <  1:295002/149‑1 (MQ=255)
                                       taaaTTAAAAGTTTGGGGTTTCTAATATTTTGAGCTTTTCTTTTTTTTTTAAATATCTATATAGGTCTTTAAATGGATTTTATTTTTACAATTTTTTGTTTTAAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATAtt                                                                                                              <  2:1215613/148‑1 (MQ=255)
                                         taTTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                            >  2:815183/2‑150 (MQ=255)
                                          aTTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTtaaaatttt                                                                                                             >  2:258805/1‑143 (MQ=255)
                                           ttaaaaTTATTGGGTTGCTGATATTTTGAGCTTTTTTTTTTTTTTTAAATATCTATATAGTTTTTTTAATGGTTTTTTTTTTTAAAATTTTTTGTTTTTAGGAATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTAc                                                                                                           <  2:230479/146‑1 (MQ=255)
                                            taaaaTTATTGGGTTGCTATTAATTTGGTTTTTTTTTTTTTTTTTAATTATTTATATAGTTTTTTAATTGTTTTTTTTTTTTACAATTTTTTGTGTTTGGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATAttt                                                                                                             <  2:676657/144‑1 (MQ=255)
                                            tGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACaa                                                                                                         >  1:43198/1‑150 (MQ=255)
                                              aaaGTATTGGGTTGCTGATATTTTGATCTTTTATATTCTTTTAAAATATCTATATAGTTCTTTTAATGGTTTTTTTTTTTACAATTTTTTGTGTTTAGGCAAATAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACa                                                                                                          <  1:136698/147‑1 (MQ=255)
                                              aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                                      >  1:1151673/1‑151 (MQ=255)
                                                  tATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                                   >  1:1216765/1‑150 (MQ=255)
                                                      ggtttGCTGATATTTTGAGCTGTTCTTTTTTTTTAAAATATCTATATAGGTCTGTTAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGtt                                                                                                                      <  1:729775/124‑1 (MQ=255)
                                                       ggTTGTTGAAAATTTGAGTTGTTTTTTTTTTTTTAAATATCTATATGGGTTTGTTAATGGTTTTTATTTTTACAATTTTTTGTTTTAAGACATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCaa                                                                                             <  2:449018/151‑1 (MQ=255)
                                                         tggCTAATATTTTGGGTTTTTTTTTTTTTTTTAAATATTTAAAGGGGTTTATAAATAGTTTTTTTTTTTTCATTTTTTTTTTTTTAGAAATAAAAAACTCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAc                                                                                            <  2:700670/148‑1 (MQ=255)
                                                          tGCTGATATTTTGAGCTTTTCTATTTTTTTAAATTATCTATATAGGTCTGTTAATGGATTTTATTTTTAAATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAcc                                                                                           <  1:598534/150‑1 (MQ=255)
                                                          tGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAAaccacc                                                                                           >  2:1126037/1‑150 (MQ=255)
                                                          tGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAATCAAc                                                                                            >  2:494343/1‑149 (MQ=255)
                                                          tGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAAACAAcc                                                                                           >  1:1057513/1‑150 (MQ=255)
                                                                tAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATATACAACTTAGCAATAAAACATTaa                                                                                      >  2:491839/1‑149 (MQ=255)
                                                                 aaTTTTAGCTGTTCTATTTTTTTAAAAAATAAAAATAGTCCTATAAATGATTTTTATTTAAAAAATTTTTGGTATATGGGCATAAAAAAATAACACCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCACCCATTa                                                                                       <  2:91358/147‑1 (MQ=255)
                                                                   ttggAGCTTTTTTTTTTTTTTAAAATATCTATATGGGTTTTTTAATGAATTTTTTTTTTAAAATTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTaa                                                                                      <  1:642430/143‑1 (MQ=255)
                                                                     tGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAACATTAACGCtt                                                                                 >  2:557354/1‑149 (MQ=255)
                                                                      gagtttttCTTTTTTTTTTAAATTTTTATATAGGTCTGTAATGGGTTTTTTTTTTAACAATTTTTTGTTTTTAGGCTTAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGa                                                                               <  2:1074060/144‑1 (MQ=255)
                                                                         ctttccttttttttttAAATATTTAAATGGCTTTGTTATTGATTTTTTTTTCAATATTTTTTTCTTTATAGAAAAAAAAAACTTTGCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGat                                                                              <  1:32788/137‑1 (MQ=255)
                                                                          tGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATc                                                                           >  1:877404/1‑150 (MQ=255)
                                                                           gTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGat                                                                              >  2:337781/1‑146 (MQ=255)
                                                                            ttCTATTTTTTTAAAATATCTATATAGTTCTTTTAATGGATTTTATTTTTAAAATTTTTTGTTTTAAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATc                                                                           <  1:876122/148‑1 (MQ=255)
                                                                            ttCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTTTTTTTACAATTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCg                                                                          <  1:232866/149‑1 (MQ=255)
                                                                             tCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATTTTTATAATTTAGCAATCAACCCTTTACGCTTGataacccct                                                                       >  2:264577/1‑145 (MQ=255)
                                                                               ttttttttttAAATCCTTTTATGGGTCTGTTAATGTTTTTTTTTTTTAAATTTTTTTGTTTTAAGGTATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCttt                                                                      <  2:194369/145‑1 (MQ=255)
                                                                               tATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGTTATCGCgttt                                                                     >  1:857864/1‑151 (MQ=255)
                                                                                 ttCTTTTTAAATATCTATATAGGTTTTTTAATGGATTTTTTTTTTACATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCtttt                                                                     <  1:248460/149‑1 (MQ=255)
                                                                                  tCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTaa                                                                   >  1:1155003/1‑150 (MQ=255)
                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTTTTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTc                                                               <  1:1200230/150‑1 (MQ=255)
                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTTCAACTTAGCAATCAAACATTAACGCTTGATATCGCTTTTAAAGTcg                                                              >  1:689130/1‑151 (MQ=255)
                                                                                         aaatttttaaagaGGTTTTTTAATGATTTTTATTTTTAAAATTTTTTGTTTTTAGGTATAAAAAAATAAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTcgc                                                             <  2:911751/137‑1 (MQ=255)
                                                                                         aaaTCTCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCAACTTAGCAATCAACCAATAAAGCTTGATATCGCTTTTAAAGTCGCGt                                                           >  2:555174/1‑151 (MQ=255)
                                                                                         aaaTATTTATAAGGATCTGTTATTGGATTTTATTTTTAAAATTTTTTGTGTTTAGCAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTcgcg                                                            <  2:210119/150‑1 (MQ=255)
                                                                                         aaaTATCTATATAGGTCTTTTAATGGATTTTATTTTTACAATTTTTTGTTTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                           <  1:62960/151‑1 (MQ=255)
                                                                                              tCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTTAAATCGCGttttt                                                       >  2:1301572/1‑150 (MQ=255)
                                                                                               cTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                                      >  2:1153886/1‑150 (MQ=255)
                                                                                                tatataGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTTGCAATCAAACATTAAAGCCTGATATTGCTTTTTAAGACGCGttttt                                                       >  2:795803/1‑148 (MQ=255)
                                                                                                  tataggaagggcgaTGGGTTTTGTATTAACAATTTTTTGTGTTTAGGCATAGGAAAATCACCCCGCCATATGAACGGAGGGGTAAAATATTTAAAAAATAGCAATCAACCATTAACGCTTGATATCTCTTTTAAAGTAGAGttttt                                                       >  2:904278/14‑146 (MQ=255)
                                                                                                  tataGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCatat                                                  >  1:1129792/1‑151 (MQ=255)
                                                                                                      gtttttttAAGGAATTTTTTTTTAACATTTTTTTTTTTTAAGGCATAAAAAAATAACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCt                                               <  2:582074/144‑1 (MQ=255)
                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTTACAATAAAACATTAACGCTTGATATCGCTTTTAAAGACGCGTTTTTCATATcacgt                                             >  2:814803/1‑147 (MQ=255)
                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTAAAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGt                                             >  1:911719/1‑151 (MQ=255)
                                                                                                        tCTGTTAATGGATTTTTTTTTTACAATTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGt                                             <  1:899393/150‑1 (MQ=255)
                                                                                                         cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAAAATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGACGCGTTTTTCATATCCTGtat                                           >  1:1138990/1‑151 (MQ=255)
                                                                                                          tGTTAATGTATTTTATTTTAACAATTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                            <  2:69707/149‑1 (MQ=255)
                                                                                                              aaTGGATTTTATTTTTAAAATTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACa                                        <  2:257863/149‑1 (MQ=255)
                                                                                                                tGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCCTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCt                                     >  1:1167078/1‑150 (MQ=255)
                                                                                                                 ggtttttattttTACAATTTTTTGTGTTTAGGCATAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTg                                    <  1:1164972/147‑1 (MQ=255)
                                                                                                                 gatttttattttTACATTTTTTTTTGTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                            <  2:360651/139‑1 (MQ=255)
                                                                                                                    ttttattttTACATTTTTTTGTTTTTAGGAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGa                                   <  2:764883/148‑1 (MQ=255)
                                                                                                                    ttttattttTAAATTTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGAGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcg                                 <  1:204040/150‑1 (MQ=255)
                                                                                                                    ttttattttTAAATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTg                                    <  1:638410/147‑1 (MQ=255)
                                                                                                                     tttattttTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                               >  1:364383/1‑151 (MQ=255)
                                                                                                                      ttttttttAAATTTTTTTTTGTTTAAACATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                               <  2:907844/147‑1 (MQ=255)
                                                                                                                       tttttttACAATTTTTTGTGTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCgg                              <  2:572248/148‑1 (MQ=255)
                                                                                                                           tttACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACggg                         >  1:1269210/1‑151 (MQ=255)
                                                                                                                            ttACAATTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACggg                         <  1:349072/150‑1 (MQ=255)
                                                                                                                                 aaTTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTTATATCGCTTTTAAAGTCGCGTTTTTTATATCCTGTATACAGCTGACGCGGGCGGGCAAt                     >  1:727454/1‑150 (MQ=255)
                                                                                                                                 aaTTTTTTGTGTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAAt                     <  2:1266293/150‑1 (MQ=255)
                                                                                                                                   ttttttGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt                  >  2:364954/1‑151 (MQ=255)
                                                                                                                                    tttttGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAATAGCGGTTTTCATATCCTGTATACAACTGAAGCGGACGGGCAATCtt                  >  2:712000/1‑150 (MQ=255)
                                                                                                                                    tttttGTGTTTAGAAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt                  <  2:920653/150‑1 (MQ=255)
                                                                                                                                      tttGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTAAAACTTAACAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATAACCTGTATACAGCTGACGCGGACGGGCAATCtt                  >  2:1076822/1‑148 (MQ=255)
                                                                                                                                       ttGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCAt               <  1:240871/150‑1 (MQ=255)
                                                                                                                                       ttGTGTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCa                <  1:479948/149‑1 (MQ=255)
                                                                                                                                          tgtTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc            <  2:18119/150‑1 (MQ=255)
                                                                                                                                            tttAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTc         >  1:282153/1‑151 (MQ=255)
                                                                                                                                            tttAGGAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAc             <  1:770985/147‑1 (MQ=255)
                                                                                                                                            tttAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATa              <  2:745116/146‑1 (MQ=255)
                                                                                                                                              tAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTTCTATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTc         >  1:1035975/1‑149 (MQ=255)
                                                                                                                                              tAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCAc       >  1:704946/1‑151 (MQ=255)
                                                                                                                                                   atatAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGc  >  1:866905/1‑151 (MQ=255)
                                                                                                                                                   ataaAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACtgt    <  1:696823/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
CATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGC  >  NC_000913/752976‑753272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: