Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,196 IS5 (–) +4 bp intergenic (‑274/‑328) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293196 =1 (0.020)56 (0.880) 50/298 0.5 98.2% intergenic (‑274/‑331) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 12931991 (0.020)49 (0.770) 45/298 0.7 98.0% intergenic (‑277/‑328) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 107 total aligned reads displayed.

TCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGC  >  NC_000913/1293050‑1293347
                                                                                                                                                     |                                                                                                                                                    
ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt                                                                                                                                                     >  2:569770‑M1/147‑151 (MQ=255)
     tCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaagg                                                                                                                                                >  2:159583‑M1/1‑145 (MQ=255)
     agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTgtgt                                                                                                                                                <  2:888282‑M1/10‑1 (MQ=255)
      gaaaatctcttttctggtctgacggcgcttactgttgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGtt                                                                                                                                               <  1:702181‑M1/11‑1 (MQ=255)
      gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGtt                                                                                                                                               <  1:499572‑M1/11‑1 (MQ=255)
      gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGtt                                                                                                                                               <  2:289989‑M1/11‑1 (MQ=255)
       aTAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtg                                                                                                                                              <  2:922933‑M1/151‑9 (MQ=255)
        aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGttt                                                                                                                                              <  2:342556‑M1/12‑1 (MQ=255)
         aaaaTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTa                                                                                                                                             <  1:666398/150‑1 (MQ=255)
            aTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaat                                                                                                                                         <  1:1024801‑M1/151‑14 (MQ=255)
               aGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaata                                                                                                                                        >  2:1000842‑M1/1‑135 (MQ=255)
                tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAAtt                                                                                                                                     <  1:209203‑M1/21‑1 (MQ=255)
                gCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagc                                                                                                                                     <  2:92272‑M1/151‑18 (MQ=255)
                  cAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcgg                                                                                                                                   >  1:214249‑M1/1‑132 (MQ=255)
                    gAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcgggg                                                                                                                                 >  1:173848‑M1/1‑130 (MQ=255)
                     ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTa                                                                                                                                >  1:739683‑M1/126‑151 (MQ=255)
                     aaaaGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcgggg                                                                                                                                 >  2:737104‑M1/1‑129 (MQ=255)
                      aaaGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcgggga                                                                                                                                >  2:839874‑M1/1‑128 (MQ=255)
                        ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTAtt                                                                                                                              <  2:459895‑M1/28‑1 (MQ=255)
                        aGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaat                                                                                                                             <  1:169366‑M1/151‑26 (MQ=255)
                        aGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaat                                                                                                                             <  1:763390‑M1/151‑26 (MQ=255)
                         gACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaatt                                                                                                                            >  2:471963‑M1/1‑125 (MQ=255)
                          gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTa                                                                                                                             <  1:25716‑M1/29‑1 (MQ=255)
                          gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTa                                                                                                                             >  2:973731‑M1/121‑149 (MQ=255)
                          gacggcgcttactgctgaattcactgtcggcaaacgtaagttggtgaatcatgatgaacactgctctatggcttcagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCtataa                                                                                                                             <  2:975406‑M1/29‑3 (MQ=255)
                           acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGc                                                                                                                          >  1:244378‑M1/120‑151 (MQ=255)
                            gcgGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattctt                                                                                                                         <  2:952096‑M1/151‑30 (MQ=255)
                            gcgGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattctt                                                                                                                         >  1:752109‑M1/1‑122 (MQ=255)
                             ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGa                                                                                                                        >  1:413605‑M1/118‑151 (MQ=255)
                                gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAatg                                                                                                                     <  2:95471‑M1/37‑1 (MQ=255)
                                 atatAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgcataagcggggaaattcttctcg                                                                                                                     >  1:51858‑M1/1‑117 (MQ=255)
                                 atatAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                    <  2:617637‑M1/151‑35 (MQ=255)
                                   ataGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                  <  1:844661‑M1/151‑37 (MQ=255)
                                     aGCCCTATTTACACCGATGATTTAGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                 >  1:863323‑M1/1‑113 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatgtctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTATTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGaaaa                                                                                                              >  2:10114‑M1/108‑151 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGaa                                                                                                                >  1:453853‑M1/108‑149 (MQ=255)
                                         tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGt                                                                                                            <  1:685207‑M1/46‑1 (MQ=255)
                                           aTTTAAACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                          >  2:824187‑M1/1‑107 (MQ=255)
                                              tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGaa                                                                                                        >  1:371164‑M1/101‑150 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAAc                                                                                                       >  2:269526‑M1/100‑150 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACa                                                                                                      >  2:297433‑M1/100‑151 (MQ=255)
                                                cacCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                     <  2:600484‑M1/151‑50 (MQ=255)
                                                       gatTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                              <  2:90518‑M1/151‑57 (MQ=255)
                                                        atTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                             >  2:505994‑M1/1‑94 (MQ=255)
                                                          ttCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                            >  1:578324‑M1/1‑92 (MQ=255)
                                                            ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAagag                                                                                         >  1:261703‑M1/87‑151 (MQ=255)
                                                             gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGc                                                                                        >  1:922636‑M1/86‑151 (MQ=255)
                                                               aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCAt                                                                                      >  2:498025‑M1/84‑151 (MQ=255)
                                                                agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATg                                                                                     <  2:922033‑M1/69‑1 (MQ=255)
                                                                agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGAAATAAGAGCATg                                                                                     <  2:759331‑M1/69‑1 (MQ=255)
                                                                 caCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                                    <  1:181209‑M1/151‑67 (MQ=255)
                                                                 caCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                     >  1:252879‑M1/1‑85 (MQ=255)
                                                                 caCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                     >  2:101575‑M1/1‑85 (MQ=255)
                                                                  aCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                     >  2:230768‑M1/1‑84 (MQ=255)
                                                                   cGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcaagtttgagc                                                                                  <  2:563334‑M1/151‑69 (MQ=255)
                                                                     tGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                >  2:216762‑M1/1‑81 (MQ=255)
                                                                     atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACtt                                                                                <  1:391654‑M1/74‑1 (MQ=255)
                                                                       aGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                              <  1:865375‑M1/151‑73 (MQ=255)
                                                                         ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAg                                                                              <  2:453780‑M1/76‑1 (MQ=255)
                                                                          tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTAt                                                                           <  1:980818‑M1/79‑1 (MQ=255)
                                                                           catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTTGCAATAAGAGCATGGACTTAGTa                                                                            >  2:65921‑M1/72‑149 (MQ=255)
                                                                           catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTAtt                                                                          <  1:248994‑M1/80‑1 (MQ=255)
                                                                            atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTg                                                                         >  2:1026139‑M1/71‑151 (MQ=255)
                                                                             aaaCTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                        >  2:690929‑M1/1‑73 (MQ=255)
                                                                                tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACt                                                                     <  2:942893‑M1/85‑1 (MQ=255)
                                                                                cTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                     >  1:251386‑M1/1‑70 (MQ=255)
                                                                                  tCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                   >  2:38791‑M1/1‑68 (MQ=255)
                                                                                   accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTAtc                                                                  >  2:230944‑M1/64‑151 (MQ=255)
                                                                                     tGATTCATGTCACATTTTATGGGGAGCTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                                 >  2:747056‑M1/1‑65 (MQ=255)
                                                                                        gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTcc                                                               >  1:764998‑M1/59‑149 (MQ=255)
                                                                                            tGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                         >  1:371369‑M1/1‑58 (MQ=255)
                                                                                             atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGt                                                        >  2:608444‑M1/54‑151 (MQ=255)
                                                                                              tCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                        >  1:516176‑M1/1‑56 (MQ=255)
                                                                                                   ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAAc                                                    <  1:76210‑M1/102‑1 (MQ=255)
                                                                                                     ttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                               >  2:513988‑M1/1‑49 (MQ=255)
                                                                                                     ttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                               <  1:514128‑M1/120‑72 (MQ=255)
                                                                                                         ggggAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                            <  1:572428‑M1/151‑107 (MQ=255)
                                                                                                          gggAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                           >  1:554905‑M1/1‑44 (MQ=255)
                                                                                                           caaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTAt                                          >  2:897774‑M1/40‑151 (MQ=255)
                                                                                                            aaacatgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTAtt                                         <  2:81137‑M1/113‑1 (MQ=255)
                                                                                                               aTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                      >  1:688226‑M1/1‑39 (MQ=255)
                                                                                                                ttATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccg                                     >  1:837050‑M1/1‑38 (MQ=255)
                                                                                                                atgatctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACtt                                     <  2:615228‑M1/117‑1 (MQ=255)
                                                                                                                    tctcatatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTgcgc                                 <  1:123933‑M1/121‑1 (MQ=255)
                                                                                                                       catatcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTgcgc                                 >  1:985313‑M1/28‑148 (MQ=255)
                                                                                                                       aGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                              >  1:693518‑M1/1‑31 (MQ=255)
                                                                                                                          atcagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAgg                           <  2:642197‑M1/127‑1 (MQ=255)
                                                                                                                            cagggacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGtt                         <  1:605664‑M1/129‑1 (MQ=255)
                                                                                                                               gacCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                      <  1:737303‑M1/151‑129 (MQ=255)
                                                                                                                               gacCTTTCAGTCTTCTGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                      <  1:59504‑M1/151‑129 (MQ=255)
                                                                                                                                gacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAg                     >  1:625106‑M1/19‑151 (MQ=255)
                                                                                                                                gacttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTAAACAGAGGGCTATTACTTGCGCATCAGGTTAAAg                     >  1:999893‑M1/19‑151 (MQ=255)
                                                                                                                                 acttgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGa                    >  1:888504‑M1/18‑151 (MQ=255)
                                                                                                                                    tgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGAtt                  >  1:192423‑M1/15‑150 (MQ=255)
                                                                                                                                    tgttcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGAt                   >  2:1030076‑M1/15‑149 (MQ=255)
                                                                                                                                       tcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATtgtg               <  1:1002201‑M1/139‑1 (MQ=255)
                                                                                                                                       tcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATtgtg               >  1:53223‑M1/12‑150 (MQ=255)
                                                                                                                                            ccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGt         >  1:800106‑M1/7‑151 (MQ=255)
                                                                                                                                                ccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTAcc     <  2:255314‑M1/149‑1 (MQ=255)
                                                                                                                                                    aGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACcagc  >  1:336392/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGC  >  NC_000913/1293050‑1293347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.