Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,416,518 IS5 (–) +4 bp coding (866‑869/2601 nt) recE ← Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1416518 =0 (0.000)43 (0.680) 41/298 1.1 100% coding (869/2601 nt) recE Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 14165210 (0.000)86 (1.360) 55/298 0.3 100% coding (866/2601 nt) recE Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 130 total aligned reads displayed.

GGATGACCTCGATCCCAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCGCCGCCAGCATTAGCACCGGAAGCCG  >  NC_000913/1416372‑1416671
                                                                                                                                                     |                                                                                                                                                      
ggATGACCTCGATCCCAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGg                                                                                                                                                       >  1:158225‑M1/1‑150 (MQ=255)
        tCGATCCCAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgc                                                                                                                                               >  1:509076‑M1/1‑142 (MQ=255)
          gATCCCAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcg                                                                                                                                              >  2:713843‑M1/1‑140 (MQ=255)
              ccAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaata                                                                                                                                          >  1:486839‑M1/1‑136 (MQ=255)
                  tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGtt                                                                                                                                     <  2:230100‑M1/23‑1 (MQ=255)
                   tGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcgg                                                                                                                                     >  2:463350‑M1/1‑131 (MQ=255)
                     gTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcgggg                                                                                                                                   >  2:168255‑M1/1‑129 (MQ=255)
                       tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTtat                                                                                                                                   <  2:408826‑M1/25‑1 (MQ=255)
                              ttACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttc                                                                                                                          <  2:803058‑M1/150‑31 (MQ=255)
                              gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTcc                                                                                                                           <  2:584356‑M1/33‑1 (MQ=255)
                                  ggACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                     >  1:727195‑M1/1‑116 (MQ=255)
                                      tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTg                                                                                                                 <  2:809968‑M1/43‑1 (MQ=255)
                                      gCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                                 >  1:417312‑M1/1‑112 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGa                                                                                                                >  2:55468‑M1/108‑151 (MQ=255)
                                       cAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                                >  1:263813‑M1/1‑111 (MQ=255)
                                          gaattcactgtcggcgaaggtaagttgatgactcatgatgaacccggttctatggctccagatgacaaacaggatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTATAGATGTCCAGATCCATTGAACg                                                                                                             >  2:780938‑M1/105‑150 (MQ=255)
                                          ccACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               >  2:847173‑M1/1‑108 (MQ=255)
                                            attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACggg                                                                                                           <  2:789313‑M1/49‑1 (MQ=255)
                                              tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGcc                                                                                                         <  1:1005938‑M1/51‑1 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGcc                                                                                                         <  2:12307‑M1/51‑1 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCa                                                                                                        >  2:894933‑M1/100‑151 (MQ=255)
                                                   gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTAc                                                                                                    >  1:156346‑M1/96‑151 (MQ=255)
                                                      ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGcc                                                                                                 <  1:942994‑M1/59‑1 (MQ=255)
                                                       ggAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                                <  1:978969‑M1/151‑57 (MQ=255)
                                                            aatCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                           <  2:59578‑M1/151‑62 (MQ=255)
                                                             gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCt                                                                                          <  1:700151‑M1/66‑1 (MQ=255)
                                                               ccAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                        <  1:23656‑M1/151‑65 (MQ=255)
                                                                cAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                       <  2:711038‑M1/151‑66 (MQ=255)
                                                                agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACg                                                                                       >  1:952454‑M1/83‑151 (MQ=255)
                                                                   cccGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                    <  2:651150‑M1/151‑69 (MQ=255)
                                                                       ccAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                                >  1:844229‑M1/1‑79 (MQ=255)
                                                                        actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCgcgcgc                                                                               >  1:740353‑M1/75‑151 (MQ=255)
                                                                         aGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                              >  2:777199‑M1/1‑77 (MQ=255)
                                                                          ggCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             <  1:175665‑M1/151‑76 (MQ=255)
                                                                           catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAg                                                                            >  1:324084‑M1/72‑151 (MQ=255)
                                                                            cATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                           <  1:695811‑M1/151‑78 (MQ=255)
                                                                            cATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                           <  2:90415‑M1/151‑78 (MQ=255)
                                                                                  gatgaATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                     <  1:865745‑M1/151‑84 (MQ=255)
                                                                                  gatgaATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                     >  2:156454‑M1/1‑68 (MQ=255)
                                                                                   accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCa                                                                    >  2:749035‑M1/64‑151 (MQ=255)
                                                                                    ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTc                                                                     <  1:765177‑M1/87‑1 (MQ=255)
                                                                                        tttGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                               >  2:292437‑M1/1‑62 (MQ=255)
                                                                                        gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGAt                                                                 >  1:329205‑M1/59‑149 (MQ=255)
                                                                                         ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCgt                                                              <  1:20018‑M1/94‑1 (MQ=255)
                                                                                         ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCg                                                               <  1:718700‑M1/93‑1 (MQ=255)
                                                                                             cgcgGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttattcatgtttgagccgattttttctcccgtaaatgccttg                                                          >  1:742281‑M1/1‑57 (MQ=255)
                                                                                                 gAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                                      >  1:645819‑M1/1‑53 (MQ=255)
                                                                                                 ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGaa                                                       <  1:966850‑M1/101‑1 (MQ=255)
                                                                                                  aaaaCAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                                      >  1:651066‑M1/1‑52 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCtt                                                  <  1:87681‑M1/106‑1 (MQ=255)
                                                                                                      cAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                                 >  2:826531‑M1/1‑48 (MQ=255)
                                                                                                       aGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta                                                <  1:301636‑M1/151‑105 (MQ=255)
                                                                                                       aGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                                 >  2:347014‑M1/1‑47 (MQ=255)
                                                                                                        tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTcgc                                               <  1:1007726‑M1/109‑1 (MQ=255)
                                                                                                        gAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                               <  2:109514‑M1/151‑106 (MQ=255)
                                                                                                         gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTcgcc                                              >  1:408933‑M1/42‑151 (MQ=255)
                                                                                                          acaggGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                              >  1:407899‑M1/3‑44 (MQ=255)
                                                                                                            aaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCcgcg                                           >  2:273149‑M1/39‑151 (MQ=255)
                                                                                                            aGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             >  1:783839‑M1/1‑42 (MQ=255)
                                                                                                                cGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccg                                       >  2:1033059‑M1/1‑38 (MQ=255)
                                                                                                                 ggTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt                                      >  1:686284‑M1/1‑37 (MQ=255)
                                                                                                                        tttCAGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                                <  1:1021821‑M1/150‑121 (MQ=255)
                                                                                                                          atcagggacttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTc                             <  1:982637‑M1/127‑1 (MQ=255)
                                                                                                                            aGCGATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                           >  1:531779‑M1/1‑26 (MQ=255)
                                                                                                                               gATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        <  2:723908‑M1/151‑129 (MQ=255)
                                                                                                                               gATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        <  2:6851‑M1/151‑129 (MQ=255)
                                                                                                                               gATAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                         >  1:534953‑M1/1‑23 (MQ=255)
                                                                                                                                aTAATTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                       <  1:847388‑M1/151‑130 (MQ=255)
                                                                                                                                  cttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCgccgcc                      <  1:682076‑M1/134‑1 (MQ=255)
                                                                                                                                  cttgttcgcaccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCgccgcc                      <  2:649774‑M1/134‑1 (MQ=255)
                                                                                                                                  aaTTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                      <  1:47546‑M1/150‑131 (MQ=255)
                                                                                                                                   aTTTCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc                    >  1:819813‑M1/1‑19 (MQ=255)
                                                                                                                                    tttCCTCAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                   >  2:954382‑M1/1‑18 (MQ=255)
                                                                                                                                      gcaacgaaaaaaatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt                 <  2:943750‑M1/138‑136 (MQ=255)
                                                                                                                                        aacgaaaaaaatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat               >  2:100897‑M1/12‑14 (MQ=255)
                                                                                                                                         acgaaaaaaatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc              <  2:825255‑M1/141‑139 (MQ=255)
                                                                                                                                          caccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCGCCGCCAGCATTAGc             <  2:978060‑M1/143‑1 (MQ=255)
                                                                                                                                          cAATGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat               <  2:486707‑M1/149‑138 (MQ=255)
                                                                                                                                           aaTGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc            <  1:106251‑M1/151‑141 (MQ=255)
                                                                                                                                            ccttccTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCGCCGCCAGCATTAGCa            >  2:75634‑M1/7‑150 (MQ=255)
                                                                                                                                            aaaaaaatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           >  2:158006‑M1/8‑10 (MQ=255)
                                                                                                                                            aTGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           >  1:331308‑M1/1‑10 (MQ=255)
                                                                                                                                             tGCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           >  1:472446‑M1/1‑9 (MQ=255)
                                                                                                                                              gCGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca          <  1:847960‑M1/150‑143 (MQ=255)
                                                                                                                                              aaaaatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc           >  1:185674‑M1/6‑8 (MQ=255)
                                                                                                                                                 tttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  2:335761‑M1/1‑5 (MQ=255)
                                                                                                                                                 tttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  1:860018‑M1/1‑5 (MQ=255)
                                                                                                                                                 aatagggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  2:372406‑M1/3‑5 (MQ=255)
                                                                                                                                                   tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:355002‑M1/1‑3 (MQ=255)
                                                                                                                                                   tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:63304‑M1/1‑3 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  2:785618‑M1/151‑150 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  2:158182‑M1/151‑150 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  1:159626‑M1/150‑149 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:663509‑M1/1‑2 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  1:745492‑M1/150‑149 (MQ=255)
                                                                                                                                                    aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:587339‑M1/1‑2 (MQ=255)
                                                                                                                                                    aGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCGCCGCCAGCATTAGCACCGGAAGcc   <  1:315764/151‑1 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:706641‑M1/151‑151 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:961826‑M1/151‑151 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:787350‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GGATGACCTCGATCCCAATTGGTGCTTCTTTTACGGACGCAACCACGATGGCGCGGGAATAATCCAGCCCGCCAGGCATGGTGATGAATTTGTCGCGGAAAACAGAAAAGGGCGGTTTATTTTCAGCGATAATTTCCTCAATGCGTTTAGCGTGTGCCGGATGAAGGTTATAGATGTCCAGATCCATTGAACGGGCCAGTACGCCAGTGGCTACGTCGCGCGCCAGTGACGTCAGATCGTGTACGAAACCTTCGCCGCGATCGGTGAGGTTTCCGCCGCCAGCATTAGCACCGGAAGCCG  >  NC_000913/1416372‑1416671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.