| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,061 | 0 | G | A | 48.4% | 61.6 / 49.1 | 64 | intergenic (‑124/+79) | ves/spy | cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base G (31/2); new base A (0/31); total (31/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.98e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATT > NC_000913/1824911‑1825211 | cATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaaag < 1:671038/151‑1 (MQ=255) tttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGagaaaagaa < 1:127288/150‑1 (MQ=255) tACGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAc > 2:476797/1‑151 (MQ=255) aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAAcc > 1:697087/1‑151 (MQ=255) tataAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTTTTATCGTTCAGGTAACCGTGGATGTTTATCGGCAACTGGGGTGATTTACT‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAAAAAAccgccg < 2:874132/150‑1 (MQ=255) tatCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTTTCGGCAACTGGGGTGATTTACG‑TTAGTGGTGATCAGGTTTTTTTTACAACTGTTTGAG‑AAGAGAAAAAAAAAccgccg < 2:458100/150‑1 (MQ=255) aTTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTcc > 2:692505/1‑150 (MQ=255) aTTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTcc > 2:1037982/1‑150 (MQ=255) ccaaccccgccccGGCCCTTTTTTTTTAATTTTTATCTTTAAGTTAACCTTGGATGTTTATCGCAAACTGGGGTAATTTACG‑TTATTTGTGCTCAGCTTTTTTTAACAACTGTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCg < 2:809744/141‑1 (MQ=255) aCTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTGGTGGTGATCAGGCTTTTTTTACAACCGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt > 1:27394/1‑151 (MQ=255) cTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt > 2:2381/1‑150 (MQ=255) cTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt > 1:533865/1‑150 (MQ=255) tCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTAc > 1:441849/1‑151 (MQ=255) cccccGGCCT‑TTTCTTTTCTTTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGAAACTGGGGTGATTTACG‑TTGGTGGTGACCAGGTTTTTTTTACAACTGTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTg < 1:848505/148‑1 (MQ=255) cTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGc > 1:897525/1‑151 (MQ=255) tCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGc > 2:1039791/1‑150 (MQ=255) cccGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCa > 2:977471/1‑150 (MQ=255) ccGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCa > 1:392539/1‑149 (MQ=255) ccc‑TTTTTTTTCTTTTTTATCTTTCAGTAAACGGGGGATGGTTACCGAAAACGGGGGT‑ATTTAAGTTTAGTGGTGATCAGTTTTTTTTAAAATTTTTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAg < 2:784438/147‑1 (MQ=255) gTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 2:304789/1‑151 (MQ=255) tCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGAc > 1:429258/1‑151 (MQ=255) tttttATCTTTCAGGTACCGGTGGATGGTTATCGGCAACTGGGGTGATTTACG‑TTAGGGGTGATCAGGTTTTTTTTACAACTGTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcg < 1:740969/147‑1 (MQ=255) ttttATCTTTCAGGTACCGGTGGTTGTTTATCGCCACCTGGGGTGATTTCCG‑TTGGTGGTGACCAGTTTTTTTTTAAAATTTTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGAcc < 1:321569/146‑1 (MQ=255) tCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGCCt > 2:439939/1‑151 (MQ=255) ttCAGGTAACGGGGGATGTTTATCGCCAATGGGGTTGATTTACG‑TTATTGGTGATCAGTTTTTTTTTACAATTTTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTc < 1:742309/147‑1 (MQ=255) ggTACCGGTGGTTGTTTATCGGCACCTGGGGTGTTTTACG‑TTAGTGGTGATCGGTTTTTTTTTACACTTTTTTGAA‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttt < 1:34261/151‑1 (MQ=255) ggTACCCGTGGTTGTTTATCGGCAACTGGGTTGTTTTACG‑TTAGTGGTGATCAGGTTTTTTTTACAACTTTTGGAG‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACAGGCGGTCTTAAGttt < 1:911145/151‑1 (MQ=255) accggTGGATGTTTATCGGCAACTGGGGTAATTTACG‑TTAGTGTTGATCAGGTTTTTTTTACAATTTTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtttttt < 2:269007/147‑1 (MQ=255) cggTGGATGTTTATCGGCAACTGGGGTGATTTACG‑TTAGTGGTGATCAGTTTTTTTTTACAACGGTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTg < 1:792205/148‑1 (MQ=255) tGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg > 1:976534/1‑151 (MQ=255) gtaTGGTTATCGCCAACTCGGTTGATTTACG‑TGAGTGGCGAGCAGTTTTTTTTTAAACCGTTTTGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg < 1:42597/148‑1 (MQ=255) ggttGGTTACCGCCAACTCGAGTGATTTCCG‑TTAGTGGTATTCGGTTTTTTTTTACAAGTGTTTGAA‑AAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTg < 1:591254/143‑1 (MQ=255) aTGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaa > 1:1023836/1‑150 (MQ=255) ttATCGGCAACTGGGGTGATTTACG‑TTAGTGGTGATCGGGTTTTTTTTACAACTTTTTGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGa < 2:151353/149‑1 (MQ=255) ttATCGGCAACTGGGGTAATTTACG‑TTAGTGGTGATCAGGTTTTTTTCACACTTTTTAGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 2:132508/148‑1 (MQ=255) ttAGCGCCAATTCGGGTAATTTAGG‑TTAGTAGTGAGGAGGTTTTTTTAACATTTTTTTGAA‑AAGAGAAAAAATACCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 2:70253/148‑1 (MQ=255) aTCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGattat > 1:168991/1‑151 (MQ=255) cGGCAACGCGGTAGATTTATG‑TTGGGTTTGATCAGTTTTTTTTTACACCTTTTTAAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGattatt < 2:592639/150‑1 (MQ=255) aaCTGGGGTATTTTACT‑TTATGGGTGATCGGTTTTTTTTAAAAACTTTTGGAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGattatt < 2:716043/146‑1 (MQ=255) aCTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTcagc > 1:202215/1‑149 (MQ=255) tCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTTAGCAGtt > 2:237895/1‑151 (MQ=255) ggggTAATTTAGG‑TAGGTGGTGTTCGGGTTTTTTTAACAATTTTTGAAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg < 2:388240/150‑1 (MQ=255) gggTGATTTATT‑TTAGTGGTGATCGGTTTTTTTTTACACCTTTTAGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGt < 1:904119/148‑1 (MQ=255) ggTGATTTACT‑TTAGTGGTGATCAGGTTTTTTTTACAACTGTTGGAG‑AAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 1:71028/151‑1 (MQ=255) gATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTTAGCCGTTGCAGGc > 1:384845/1‑151 (MQ=255) tttCCG‑TTAGTGGTGATCAGTTTTTTTTTAAAACTGTTGGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCa < 1:2382/150‑1 (MQ=255) tttACG‑TTAGTGGTGATCGGGTTTTTTTTAAATCTTTTTAAG‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAgg < 1:1038241/148‑1 (MQ=255) gtggtgATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt > 1:1017864/1‑151 (MQ=255) tggtgATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtttt > 2:524537/1‑151 (MQ=255) tggtgATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCCTTTTACCtttt > 2:867599/1‑151 (MQ=255) tggggATAAGGTTTTTTTTACAATTGTTTGAG‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCtt < 2:969725/149‑1 (MQ=255) ggtgATCAGTTTTTTTTTCCAATTTTTAGAA‑AAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt < 1:471588/149‑1 (MQ=255) tgACCAGGTTTTTTTTACAATATTTTGAG‑AAAAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTg < 1:74576/149‑1 (MQ=255) tCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTTCAGGCATTTTACCTTTTGCCGc > 2:734816/1‑150 (MQ=255) gttttttttAACAGTTTTTGAAAAAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGc < 2:381516/142‑1 (MQ=255) tttttttACAATTGTTTGAA‑AGGAAAAAAAAAACCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACg < 2:404282/150‑1 (MQ=255) tttttttACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTTAGCAGTTGCAGGCATTTTACCTTTTGCCCCTGGACGt > 2:296660/1‑151 (MQ=255) tttACAATTGTTTGAA‑AAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt < 2:528888/150‑1 (MQ=255) tACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTc > 1:261270/1‑151 (MQ=255) aCAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 2:842419/1‑149 (MQ=255) aCAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTTAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 2:258746/1‑147 (MQ=255) aattGTTAGAA‑AAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCa < 2:533716/146‑1 (MQ=255) aaCTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTc > 1:392306/1‑148 (MQ=255) gTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCt > 1:552107/1‑151 (MQ=255) tttGAA‑AAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCa < 1:726579/144‑1 (MQ=255) aagaaaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtctc < 2:897303/148‑1 (MQ=255) aaaaaaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTa < 1:476928/150‑1 (MQ=255) aagaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGc > 1:55007/1‑150 (MQ=255) gaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCCGTAAAATTATTCAGCAGGTGTAGGCATTTTACCTTTTGCCGCTTGGCGTTCTTTCAGACGCTTCTCAAAATTAACAtt > 1:596420/1‑151 (MQ=255) | CATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCC‑GTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGGTTATCGGCAACTCGGGTGATTTACG‑TTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAG‑AAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAGCATT > NC_000913/1824911‑1825211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |