| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 48.1% | 109.8 / 33.3 | 79 | V288G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (3/38); new base G (38/0); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAC > NC_000913/599428‑599724 | aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtgg < 1:2237/151‑1 (MQ=255)aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggtgg < 2:107320/151‑1 (MQ=255) gCTCGACGACTTTAATCACTTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGgtggtg > 2:927937/1‑151 (MQ=255) gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGgtggtg < 2:453177/151‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGAt < 2:150551/150‑1 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTcc > 1:952023/1‑151 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTcc > 2:370301/1‑149 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGAGCCt > 2:658811/1‑150 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATc > 1:195681/1‑151 (MQ=255) aaTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCg < 1:428764/151‑1 (MQ=255) aaTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCg < 2:419027/151‑1 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCa < 2:62986/151‑1 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGC‑GATCCgg > 1:425221/1‑149 (MQ=255) tCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATCCGGCaaaa > 2:624326/1‑150 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCTGC‑GATCCGGCaaaaa > 1:239554/1‑150 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGC‑GATCCGGCaaaaa > 1:80105/1‑150 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGaa < 1:705561/151‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGaa < 1:578644/151‑1 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTTCGGTTCCGGAAAAAAGCCCCGGGAAg > 1:656276/1‑149 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAAAGCCCGAGAAggg > 2:673626/1‑148 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGC‑GGGCCGGCAAAAACACCCggggaggg > 1:538407/1‑142 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATc < 1:295045/150‑1 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATc < 1:498381/150‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATcgc < 2:952036/151‑1 (MQ=255) aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGAGCCTGT‑GGTGCGGGCAAAACACCCGCGAAGTGaatgc > 1:394469/1‑146 (MQ=255) aaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATcgccg < 2:942840/151‑1 (MQ=255) tGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGACCTTC‑GGTCCGGCAAAAACGCCCgaggaggggttggcgcc > 1:580214/1‑140 (MQ=255) tGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATcgccgc > 2:249436/1‑150 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTAGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGccgccg < 2:657823/151‑1 (MQ=255) cGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTg < 2:335877/151‑1 (MQ=255) cGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATTCTGC‑GGACCGGCAAAAACGCCCGAGAAGGGAACGcccccggg > 2:425580/1‑149 (MQ=255) tGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGC‑GATCCGGCCAAAACGCCCGAGAAGTGGACGCCGCCGt > 2:835934/1‑148 (MQ=255) tGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTg > 2:657199/1‑149 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑aa < 2:264885/150‑1 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GGTCCGGCAAAAACGCCCGGGAAGGGATCGCCGCCGGG‑AAgg > 2:605642/1‑150 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGCG‑AAg > 1:176034/1‑148 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCAGC‑GATCCCGCGAAAACCACCCAGAAATGATCGCCGCCGTG‑GAg > 2:360202/1‑147 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGCG‑AAgg > 2:417601/1‑148 (MQ=255) tttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGG‑GATCCGGCAAAAAAGCCCGGGAAATGGACGCCGCCGCG‑AAgggc > 1:425375/1‑147 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACaa < 2:415052/150‑1 (MQ=255) tCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCTC‑GATCCGGCAAAAAAGCCCGGGGAGGGATCGCCGCCGGG‑AAgggaaaaacg > 1:812829/1‑143 (MQ=255) cTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGG‑AAGGACAAACTgg > 1:884390/1‑151 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGaa < 1:563608/151‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGa < 2:312712/150‑1 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTG‑GAGGGCAAAATGGaaa > 2:644756/1‑150 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GATACGGAAAAAACACCCGAGGAGTGGTCGCCGCCGGg‑gaggaacaaattgaaa > 2:207698/1‑139 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTC‑GACCCGGGAAAAACGCCCGAGAAGGGATCGCCGCCGGG‑AAAGACAAACTGGAAAAGc > 2:482419/1‑151 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCt < 1:217326/151‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTG‑AAGGGCAAAATGGaaa > 2:110812/1‑147 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGG‑AAGGGCAAACAGGaaa > 1:40890/1‑147 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGAGGGGGGGGGGACCTTC‑GGTCCCGCAAAAACGCCCTCGCAGTGAAAGCCGGCGGGTAAGGAAAAAATGaaa > 1:139602/1‑147 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTg < 1:884451/150‑1 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATACCGC‑GATCCGGGAAAAAAGCCCGAGAAGGGGTCGCCGCCGTG‑AAGGACAAAATGGAAAAGCTGaaaa > 2:659556/1‑150 (MQ=255) gAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAag < 2:397767/150‑1 (MQ=255) aaGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAagta < 1:557494/151‑1 (MQ=255) aGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAagtag < 2:255416/151‑1 (MQ=255) aGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGC‑GGTCCGGCAAAAAAGCCCGAGAAGGGATAGCCGCCGTG‑GAGGACAAACTGGAAAAGCTGaaaa > 2:525298/1‑147 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCTGC‑GGTCCGGCAAAAAAACCCGCGAAGGGATCGCCGCCGGG‑GAGGGAAAACTGGGAACGCTGAAAagaa > 1:764647/1‑146 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCgg < 2:796339/151‑1 (MQ=255) ttGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCg < 1:205269/149‑1 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGC‑GATCCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGGAGTCTGCCgg > 2:107074/1‑149 (MQ=255) ggCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGaa < 2:538416/150‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg < 2:299941/151‑1 (MQ=255) ccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCg < 2:864495/151‑1 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGATCCTGC‑GATCCGGCAAAAACGCCCGGGAAGGGATCGCCGCCGTG‑AAGGGCAAACTGGAAACGCTGGAAAGGAGTCTGCCGGAAGGCg > 1:277618/1‑150 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTgg < 2:487761/151‑1 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTgg < 1:809126/151‑1 (MQ=255) cGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 2:223179/151‑1 (MQ=255) ggggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAAAGCCCGGGAAGTGATCGCCGCCGTG‑AAGGACAAAACGGGAAAGCTGAAAAGTAGTCTGCCCGGAGGGGGGGGGGTAGtt > 1:12988/1‑149 (MQ=255) gggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTaca < 1:418325/151‑1 (MQ=255) ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTacaa < 1:624673/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt < 2:80108/151‑1 (MQ=255) ccGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGTGGACCTGC‑GAACCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGG‑AAGGACAAACTGGGAACGCTGGAAAGGAGGACGCCGGGAGGCGTGGGGGTAATTACAACATa > 1:863227/1‑148 (MQ=255) gAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTTCTGC‑GATCCCGCAAAAACGCCCGGGGAGGGATCGCCGCCCGG‑GAGGAGAAAATGGGAACGCTGAAAAGAAGTCTGCCGGGAGGCGGGGGGGTAGTTACAACAAACGa > 1:357508/1‑149 (MQ=255) gcgaaggcgaagTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCt < 2:960689/151‑1 (MQ=255) gaaggcgaagTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCa < 2:689120/151‑1 (MQ=255) gaaggcgaagTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCa < 1:370294/151‑1 (MQ=255) ggcgaagTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCAGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCAtt < 1:786541/150‑1 (MQ=255) gTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcgcg < 1:819058/151‑1 (MQ=255) gggcgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAGAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 1:482409/151‑1 (MQ=255) cgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 2:29397/1‑151 (MQ=255) cgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 1:912389/1‑151 (MQ=255) gggTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACa > 1:120935/1‑150 (MQ=255) ggtggtGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAc < 1:800639/151‑1 (MQ=255) ggtggtGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAc > 2:96428/1‑151 (MQ=255) | ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTG‑AAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAC > NC_000913/599428‑599724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |