| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 484,337 | (C)6→7 | coding (67/3150 nt) | acrB ← | multidrug efflux system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 484,331 | 1 | . | C | 98.6% | 237.7 / ‑2.9 | 70 | coding (73/3150 nt) | acrB | multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (31/38); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01 | |||||||||||
GTTATCGATACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTGCTGGTTATT > NC_000913/484182‑484476 | gTTATCGATACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑g > 2:1196466/1‑150 (MQ=255) tCGATACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑ccccc > 1:1181609/1‑151 (MQ=255) gATACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑ccccccc > 2:623968/1‑150 (MQ=255) aTACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑ccccccc > 1:674754/1‑149 (MQ=255) aTACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGGTTGAGGATCGCCA‑G‑ccccccc > 1:652438/1‑149 (MQ=255) gTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCaa < 1:648393/151‑1 (MQ=255) ttCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCaa > 1:60320/1‑150 (MQ=255) cATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACat < 2:355015/151‑1 (MQ=255) atatTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACatg > 2:413059/1‑151 (MQ=255) atTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACatgat < 2:1123613/151‑1 (MQ=255) ttCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATaa > 2:108429/1‑150 (MQ=255) tCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATg > 1:1106633/1‑151 (MQ=255) cGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATg < 1:102888/150‑1 (MQ=255) cGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATg < 2:100990/150‑1 (MQ=255) cGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAACGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGTTGCAATCGTTGGATATTGCGCCACCGGCAGTTTGCGGGTAGCCA‑GCCCCCCCTGCCAACAGGTTGGTAATgg > 2:881611/1‑151 (MQ=255) gATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGc < 1:1035991/151‑1 (MQ=255) gATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGGGCAATCGTAGGATATTGCGCCACCGGCAGGTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATgg > 2:270246/1‑150 (MQ=255) aaCCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGa < 1:1016534/150‑1 (MQ=255) aaCCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGAt < 1:325084/151‑1 (MQ=255) aCCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGGCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGGGCAATCCTAGGGTATTTCGCCCCCGGCAGGTTTGGGATCGCCA‑GCCCCCCCCGCCCACAAGATGAAAAAgg > 1:1018939/1‑146 (MQ=255) gtCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCa < 1:256624/150‑1 (MQ=255) aCCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGc > 1:1142784/1‑150 (MQ=255) cGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaa > 1:253307/1‑150 (MQ=255) cGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGGTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaa > 1:106972/1‑150 (MQ=255) gtgtCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa < 1:1092881/151‑1 (MQ=255) tgtCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa < 1:623988/150‑1 (MQ=255) tgtCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa > 2:805975/1‑150 (MQ=255) ccTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATc < 1:1135638/150‑1 (MQ=255) cTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCgg > 2:585631/1‑151 (MQ=255) aCTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGGTCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCggg > 2:1057252/1‑148 (MQ=255) aCTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcga < 2:165774/151‑1 (MQ=255) tGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatc > 2:283710/1‑151 (MQ=255) gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcg < 1:586587/151‑1 (MQ=255) gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatc < 1:505216/150‑1 (MQ=255) gTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgat < 2:575870/149‑1 (MQ=255) ttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcgat < 2:932948/150‑1 (MQ=255) ttCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcga < 2:917187/149‑1 (MQ=255) tCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATa > 1:769805/1‑150 (MQ=255) tCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATa > 1:421205/1‑150 (MQ=255) tCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATa < 1:1196452/150‑1 (MQ=255) gCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg < 1:146865/151‑1 (MQ=255) cctCAGCGCCGGAGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCTCCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaa < 2:820580/146‑1 (MQ=255) cATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGa < 2:480521/151‑1 (MQ=255) aTCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaa < 1:1215405/151‑1 (MQ=255) tCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaa > 1:241696/1‑150 (MQ=255) cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAAt < 1:1155723/151‑1 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGCTATTGCGCCCCCGGCAGCTTGAGGAACGCCA‑GCCCCCCCTGCCAACACGATGACAACGGCGGTCACCCGCGCCAAAAACGGGCGAACGATAAAGCAAtt > 2:314151/1‑149 (MQ=255) cGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCa < 2:1166155/151‑1 (MQ=255) cGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCAAGCAAAAATCGGGCGATCGATAAAGAAATTAgg > 2:78637/1‑149 (MQ=255) ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACg > 2:1062735/1‑151 (MQ=255) cGGAGATCGTTACTGCCGGCGGTGCAATTGTAGGATATTGCGCCACCCGCCGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATTAAGATAATGGCGCTCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGc > 2:705751/1‑151 (MQ=255) gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCt < 2:1243675/151‑1 (MQ=255) cGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGtt < 1:129491/151‑1 (MQ=255) gTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGttt < 2:179906/151‑1 (MQ=255) tACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTtta < 2:1055456/150‑1 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTtta > 1:807964/1‑149 (MQ=255) gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTttaagtt < 1:901447/150‑1 (MQ=255) gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGAGATAACCCAAGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTg > 2:99559/1‑151 (MQ=255) aaTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACt < 2:601369/151‑1 (MQ=255) aTCGTAGGATATTGTGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTg > 1:1220935/1‑151 (MQ=255) tAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTc < 2:115702/150‑1 (MQ=255) aGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTc > 1:982774/1‑149 (MQ=255) aGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCa < 2:620963/150‑1 (MQ=255) aGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCa < 1:916473/150‑1 (MQ=255) ttGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTg > 1:719680/1‑149 (MQ=255) gcgcCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGc > 1:938165/1‑150 (MQ=255) cgcCACCGGCAGTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCAc > 1:641878/1‑151 (MQ=255) aCCGGCAGTTTGAGGATCGCCAGG‑CCCCCCTGCCAACATGATGATAATGGAGATCACCCACGCAAAAATCGGGGGAACGATAAAGCAGTTAGGCCTGTCTTAACGGCTACTGTTTAAGTTAAGGCTTGGACTGTTCAGGCTGATCAc > 2:87517/1‑147 (MQ=255) gTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCt > 2:172805/1‑151 (MQ=255) gTTTGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCt < 2:251941/151‑1 (MQ=255) tGAGGATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTg < 2:167705/150‑1 (MQ=255) gATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGGGGCTTGCTGGt < 1:109571/151‑1 (MQ=255) gATCGCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTGCTGGt > 1:23598/1‑151 (MQ=255) gCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTGCTGGttatt < 1:413071/151‑1 (MQ=255) gCCA‑GCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTGCTGGttatt > 1:187307/1‑151 (MQ=255) | GTTATCGATACCGTTCATATTCTGTTCGATAACCTGTGTCACCGTGTCCTGCACTGTTTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTTAAGTTAAGACTTGGACTGTTCAGGCTGAGCACCGCTTGCGGCTTGCTGGTTATT > NC_000913/484182‑484476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |