Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	29,486	0	C	A	40.0%	120.5 / 39.4	65	intergenic (+291/‑165)	dapB/carA	dihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base C (29/10);  new base A (0/26);  total (29/36)
Fisher's exact test for biased strand distribution p-value = 3.29e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGA  >  NC_000913/29343‑29631                                                                                                                                                     |                                                                                                                                                  tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAaata                                                                                                                                             <  2:1044358/150‑1 (MQ=255) tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAaata                                                                                                                                             <  2:981890/150‑1 (MQ=255) tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAaata                                                                                                                                             >  2:27034/1‑150 (MQ=255)  gttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAaataat                                                                                                                                           >  1:616374/1‑151 (MQ=255)  gttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCACGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACaaaa                                                                                                                                               <  2:44661/147‑1 (MQ=255)    tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAataata                                                                                                                                          <  2:817281/150‑1 (MQ=255)    tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAatat                                                                                                                                         >  1:500912/1‑151 (MQ=255)     ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAatat                                                                                                                                         >  1:679235/1‑150 (MQ=255)       aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATaa                                                                                                                                       >  2:329386/1‑150 (MQ=255)       aaTGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATaa                                                                                                                                       <  2:566149/150‑1 (MQ=255)            aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTTAAAC‑ATGCATGAGCC‑ACAAAATGATATAAAAAAt                                                                                                                                  <  2:426137/150‑1 (MQ=255)             aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATcc                                                                                                                                <  1:731530/151‑1 (MQ=255)              aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATccc                                                                                                                               <  1:1093970/151‑1 (MQ=255)              aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATccc                                                                                                                               <  2:447374/151‑1 (MQ=255)               ttttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCg                                                                                                                              >  1:1096135/1‑151 (MQ=255)                      cATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTa                                                                                                                        >  2:248640/1‑150 (MQ=255)                                 cTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                             >  2:377489/1‑150 (MQ=255)                                  ttttttCTGCTCTTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCTTTTTCAAA‑AACAGGTTAGATGATTTTTTTGCCGT‑TTAAT‑GCCTGAAAAAC‑ATGCATGACCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                             <  1:62050/149‑1 (MQ=255)                                  ttttttCTCTTTTTTTTTATTTCATGCATTTTTTTTGCGGCGAAAGCTTTTCCAAG‑AACAGTTTAAATTATTTTTTTGTCGC‑TTAAT‑CCTTAAAAAAC‑TTGCTTGAACC‑AAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACttt                                                                                                              <  2:1185115/148‑1 (MQ=255)                                      ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                       >  2:433647/1‑151 (MQ=255)                                      ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                       >  1:78829/1‑151 (MQ=255)                                      ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGAATTTTAgcg                                                                                                         >  2:971656/1‑149 (MQ=255)                                               ttttttttTCATGAAATTTTCTTGCTGCGCAAGCTTTTCCAAG‑AACAGGTTAGATATTTTTTTTGTCGT‑TTAAT‑GCCTGAAAAAC‑ATGCATGACCC‑AAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCata                                                                                                   <  1:220891/146‑1 (MQ=255)                                                    aTTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                         >  1:776005/1‑151 (MQ=255)                                                      ttCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                       >  1:63936/1‑151 (MQ=255)                                                          taaaaTCTTTTTGCTGCCAAAGCTTTTCCCAA‑AACAGTTTAAATTTTTTTTTTATCTC‑TAAAT‑CCCT‑TAAAACAATGCATGAGCC‑AAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                       <  2:325157/144‑1 (MQ=255)                                                                 ttcttGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                            >  2:437114/1‑151 (MQ=255)                                                                  tcttGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                            >  1:749006/1‑150 (MQ=255)                                                                  tcttGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                            >  1:247253/1‑150 (MQ=255)                                                                  tcttGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGc                                                                             >  2:754160/1‑149 (MQ=255)                                                                          cgaaggctttttCAAA‑AAGAGTTTAGATTATTTTTTTGTCTT‑TAATT‑CCCTTAAAAAC‑TTGAAGGACCC‑AAAAAAAAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAt                                                                      <  2:126252/140‑1 (MQ=255)                                                                           cacaggtttttCCAAAAACAGGTTAAATAATTTTTTTTTCG‑‑TTAATCGCTTAAAAAAC‑TTGAATGCCCC‑AAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcg                                                                   <  2:822043/144‑1 (MQ=255)                                                                            cAAGCTTTTTCCAG‑AACAGTTTAGATGATCTTTTTTTCGT‑TAAAG‑GCCTGAAAAAC‑ATGAATGAGCC‑AAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                  <  1:146988/150‑1 (MQ=255)                                                                                  ttttCCAG‑AACCGGTTATCTTTTTTTTTTGTTGC‑ATATT‑CCCTATAAAAC‑AGGCAGAACCC‑ACAAAATAATAAAAAAAGTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                             <  1:1037238/149‑1 (MQ=255)                                                                                  ttttCCAG‑AACAGTTAAGATGATTTTTTTGCCGC‑TTAAT‑GCCTGAAAAAC‑ATGAATGACCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                            <  1:1145729/150‑1 (MQ=255)                                                                                  ttttCAAG‑AACGGGTTAGATATTTTTTTTTTCCT‑TTAAT‑GCTTAAAAAAC‑TTGCATGACCA‑AAAAAATAAAAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                            <  2:604886/150‑1 (MQ=255)                                                                                  ttttCAAA‑AACAGTTTAGATGATTTTTTTTTCGT‑TTATG‑GCCTGAAAAAC‑TTGTATGAGCC‑AAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCgg                                                               <  2:325432/147‑1 (MQ=255)                                                                                      caag‑aagaGTTTAGAGGTTTTTTTTG‑CGCATTACC‑GCATGTAAACA‑ATGCAGGAGCA‑AAAAAATAATATAAAAAGGCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                        <  1:99792/148‑1 (MQ=255)                                                                                           aaCAGGTTAGATGATTTTTTTGTCGC‑TTAAT‑GCCTGTAGAAC‑ATGCATGACCC‑AAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                   <  1:378173/151‑1 (MQ=255)                                                                                           aaCAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                   >  2:361434/1‑151 (MQ=255)                                                                                                 ttAGATGATTTTTTTGTCGT‑TTAAT‑GCCTGAAAAAC‑ATGCATGAACC‑AAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                               <  1:30164/149‑1 (MQ=255)                                                                                                   aGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAGATTCGTCGGTAAGCAGATTTGCAtt                                               >  2:211023/1‑147 (MQ=255)                                                                                                     atgatTTTTTTGTCGC‑TTAAT‑GCCTGAAAAAC‑ATGCAGGACCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                           <  1:1228089/149‑1 (MQ=255)                                                                                                         tttttttGTCGT‑TTATT‑GCGTGAAAAAC‑ATGTAT‑AGCCAAAAAAAAAATAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTa                                         <  2:853422/145‑1 (MQ=255)                                                                                                         tttttttGTCGT‑TAAAT‑GCTTTAAAAAC‑ATGCATGACCC‑AAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAttt                                          <  1:252341/144‑1 (MQ=255)                                                                                                         tCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                     >  2:164888/1‑151 (MQ=255)                                                                                                                      taaaT‑GCCTAAAAAAC‑ATGCATGACCC‑AAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGa                           <  2:485172/147‑1 (MQ=255)                                                                                                                       tAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                        >  2:630052/1‑151 (MQ=255)                                                                                                                          t‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat                     >  2:656654/1‑151 (MQ=255)                                                                                                                             cctaaaaaaC‑ATGCAGGACCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat                     <  1:414840/144‑1 (MQ=255)                                                                                                                             ccTGTAAAAC‑ATGCATGACCC‑AAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                    <  1:296858/150‑1 (MQ=255)                                                                                                                              cTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                  >  1:1153790/1‑151 (MQ=255)                                                                                                                               taaaaaaC‑ATACAGGGCCC‑AAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                   <  2:572425/146‑1 (MQ=255)                                                                                                                                gaaaaaa‑aTGCATGCGCC‑AAAAAAAAATATAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                    <  1:654713/145‑1 (MQ=255)                                                                                                                                gTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGc                 >  2:616284/1‑150 (MQ=255)                                                                                                                                 tAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                >  1:684156/1‑150 (MQ=255)                                                                                                                                  aaaaC‑ATGCATGAGCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTaa                      <  1:823606/143‑1 (MQ=255)                                                                                                                                   aaaacagcaatgACCC‑AAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa               <  1:607081/141‑1 (MQ=255)                                                                                                                                      c‑atgcatgAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTCTGAATTAATATGCAAATaa           >  1:1169608/1‑150 (MQ=255)                                                                                                                                        atgaatgaCCC‑AAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAag         <  1:293571/151‑1 (MQ=255)                                                                                                                                          gcatgAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg       >  1:1070864/1‑151 (MQ=255)                                                                                                                                           catgAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg       >  2:138760/1‑150 (MQ=255)                                                                                                                                             tgAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag     >  1:77344/1‑150 (MQ=255)                                                                                                                                              gAGCA‑AAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag     <  2:818882/149‑1 (MQ=255)                                                                                                                                                ccc‑AAAAAATACTAAAAAAAACTCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAgttagtga  <  2:530662/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAG‑AACAGGTTAGATGATCTTTTTGTCGC‑TTAAT‑GCCTGTAAAAC‑ATGCATGAGCC‑ACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGA  >  NC_000913/29343‑29631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑