| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,233 | 0 | G | A | 40.3% | 85.6 / 36.6 | 72 | pseudogene (60/75 nt) | ycgH | pseudogene; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (36/7); new base A (0/29); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
GTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222085‑1222382 | gtgAAAGTCGAAGGAGATGGGGCGAGTAATGTGGGGGAAATTAAACTAGGCGTAAATGGCAGTCTGAATCCAGCGGCCAGCGTCTGGTGAATGTGGGCGTGCAGCGGGGTGATAATCGCTACAATGACAC‑CGCAGTGGTGGTGGGCCTGaa < 2:726298/151‑1 (MQ=255)gtgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGaa < 2:1246383/151‑1 (MQ=255) aaaGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAat > 1:465534/1‑150 (MQ=255) cGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGt < 2:1236495/151‑1 (MQ=255) gAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGtt > 1:728319/1‑151 (MQ=255) cAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTg > 1:2200/1‑151 (MQ=255) cAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGAAAT‑TGGGCGGGCAGATTGGGGATTATGGGTAGAATAAACC‑CGCAGGGATGGGGGGCCTGGAattaaaggt > 1:643957/1‑140 (MQ=255) aaGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGa < 1:1165169/151‑1 (MQ=255) aaGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGa < 2:91079/151‑1 (MQ=255) aGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAt > 2:315023/1‑151 (MQ=255) cGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGt > 2:852569/1‑151 (MQ=255) tAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGc > 2:920775/1‑151 (MQ=255) tAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGc > 2:487281/1‑151 (MQ=255) ttGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTaa > 1:720605/1‑150 (MQ=255) gggAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAAc > 2:272961/1‑151 (MQ=255) gggAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGAGGGCCTGAAATATAAGTTCTGAT‑CACGCCGTTAGCTaaaaa > 2:422715/1‑149 (MQ=255) gAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACcg > 1:724829/1‑151 (MQ=255) aaaTTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACcgc > 2:177445/1‑151 (MQ=255) tAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGcgtcg > 2:56268/1‑151 (MQ=255) ggagTAAAGGCCACCCAGAATCCGGCGGCCGGCGTGGGGGGAAGGGGGGGGTGCAGCGGGGTGATAAGGGCTAAAATGACCC‑GGCGGTGATGGTGGGCCAAAAATATAATTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCAt < 1:384824/148‑1 (MQ=255) cGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg > 1:609525/1‑151 (MQ=255) gTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg > 2:282138/1‑150 (MQ=255) tAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAc > 2:1227774/1‑151 (MQ=255) ggCACCCTAAACCCAGCGGCCAGCGTCGGGGGATTGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACCC‑CGCAGTGATGGTGGCCCTAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcgcg < 1:56268/149‑1 (MQ=255) gCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGt > 1:735465/1‑150 (MQ=255) aaCCTGACTCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTAc > 2:1236093/1‑150 (MQ=255) ccTGAATCCAGCGGCCAGCTTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACata < 1:1117561/151‑1 (MQ=255) ctgactcaggCGGCCGGCTTGGGGGGAAGGTGGGGGGGCAGGTGGGTAAAAAGGTCAAAAAGGACAC‑CGCGGGGATGGTGTGCTAAAAATATAAGTTTGGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACata < 2:1111554/141‑1 (MQ=255) aacccAGGGCCCGGCGTGGGGGGAATGGGGGGGTGCAGCGGGGTAATAATGGCTAAAATGACCC‑CGCAGTGATGGGGGGCCTAAAATATAAGTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg < 1:504852/146‑1 (MQ=255) acccggCGGCCTGGGTCTGGGAATTGGGGGGGTGGGGGTGGGTGATAAGGGCAACAGT‑ACACGGGGAGTGAGGGGGGGCGTAAAATATATGTTTTGCT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTAAat < 2:535830/140‑1 (MQ=255) ccggCGGCCTGCTTTTGGGGAATGTGGGCGTGCGGGTGGTTAATAAGTGCAAAAATGACCC‑CGCAGTGGGGGTGGGCTTAAAATATAAGTTCTGTT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAata < 2:1165625/148‑1 (MQ=255) ggggCCGGCGTGGGGGGAATGGGGGGGTGCGGGTGGGTGATAAGGGCTAAAATAACCC‑CGAGGTGATGGGGGGCTTAAAATATAGTTTCTGTT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAatat < 2:619559/147‑1 (MQ=255) gcgcCCTGCGTTGGGGGAAGGTGGGCGTGCAGTTGGTGAATAATGCCTACAATGCCCC‑CGCAGTGAGGGGGGCCCTAAAAAATAAGTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAata < 1:1202297/148‑1 (MQ=255) gCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt > 1:162905/1‑150 (MQ=255) ggCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATattatt > 2:525100/1‑151 (MQ=255) tGGGGATTGGGGGCTTGCAGTGGGGTGATAATGGCTACAATGCCCC‑CGCGGTGATGGTGGCCCTAAAAAATATTTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCg < 2:766262/149‑1 (MQ=255) ggggaAATGGGGGCGTGCAGCTGGGTAAAAATGGCTAAAATACCCC‑CGCAGTGATGGTGGGCCTAAAATAAAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGa < 2:580305/149‑1 (MQ=255) gggggggtgaggttGGGTAATATGGCCTAAAAGGACCC‑CGCAGTGAGGGTGGGCTAAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCa < 2:1014640/134‑1 (MQ=255) gggggggggcggtggggTGATAATGGATACAATGACCC‑AGCAGTGGTGGTGGGCATAAAATATAATTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGc < 2:1207248/136‑1 (MQ=255) ggggggGTGCGGCGGGGTAATAATGGCTAAAATGACCC‑CGCGGTGGTGGTGGGCCTAAAATAAAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGc < 2:587664/148‑1 (MQ=255) ggCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATgg > 1:67136/1‑151 (MQ=255) cGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtg > 1:915005/1‑151 (MQ=255) gTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtgt > 2:1099391/1‑151 (MQ=255) ggggggTAAAAATGGCTAAAATGACCC‑CGCAGTGAGGGGGGGCTTAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatc < 1:156464/147‑1 (MQ=255) gCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatc > 1:547073/1‑150 (MQ=255) ggTAATAAGGGCTACAATGCCCC‑CGAAGTGGGGGGGGGACTAAAATATAAGTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTg < 2:870220/151‑1 (MQ=255) aggggCTAAAATGACAC‑GGAGGTGATGGTGGGCCAGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTg < 2:818934/142‑1 (MQ=255) gCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCa > 2:790531/1‑150 (MQ=255) aCAATGACCC‑CGGTGAGAAGTTGGGCCTAAAATAAATGTTCTTAT‑TCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACa < 1:789469/150‑1 (MQ=255) aCAATGACAC‑CGAAGTGAGGGGGGGCCTAAAATATAAGTTCGGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCaa < 1:866326/148‑1 (MQ=255) cAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGc > 2:175285/1‑151 (MQ=255) attGACAC‑CGCATTGATGGGGGGCCTAAAATATATGTTCGGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAg < 1:122458/147‑1 (MQ=255) aaTGACCC‑CGCAGTGAGGGTGGGCCTAAAATATAATTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGc < 1:582045/150‑1 (MQ=255) aaTGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGc > 2:610996/1‑150 (MQ=255) acgccac‑CGCAGTTATGGCGCCCTTAAAATATAATTTCTAAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCa < 1:422728/146‑1 (MQ=255) tGACAC‑CGCAGTGATGGTGGGCCTGACATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGCGATCAACAGCAtt > 2:399880/1‑151 (MQ=255) cac‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGc > 1:584980/1‑151 (MQ=255) caggatgTGATGGGCGGCCTAAAATATAA‑ATATGATGCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGGCATCAATTGCCGTGATCAACAGc < 2:1217818/138‑1 (MQ=255) c‑cGCAGTGATGGTGGGCCTAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCAttt < 1:177433/147‑1 (MQ=255) c‑cGAAGTGAGGGGGGGCCAAAAATAAAAGTTCTTCT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg < 2:465519/151‑1 (MQ=255) cGCAGTGGGGGTGGGCCTAAAATAAAATTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCggg < 1:219179/151‑1 (MQ=255) aGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCt > 1:590093/1‑151 (MQ=255) gTGATGGTGGGCTTAAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCt < 1:10128/150‑1 (MQ=255) tGATGGGGGCCCTAAAATATAAGTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCt < 1:315030/149‑1 (MQ=255) gtggGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAgcgc > 2:187130/1‑151 (MQ=255) tggGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAgcgc > 2:278187/1‑150 (MQ=255) tggGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAgcgc > 2:1233179/1‑150 (MQ=255) ggtccTAAAATATAATTTCTGAC‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCa < 1:571750/147‑1 (MQ=255) ggCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCaa > 1:256277/1‑150 (MQ=255) gcttGAAATATAATTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAAc < 1:758443/148‑1 (MQ=255) gCCTAAAATATAATTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAAc < 1:237160/151‑1 (MQ=255) tGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTg > 2:1067852/1‑151 (MQ=255) | GTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACAC‑CGCAGTGATGGTGGGCCTGAAATATAAGTTCTGAT‑CCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222085‑1222382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |