| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,200,772 | A→G | V12A (GTC→GCC) | intE ← | e14 prophage; putative integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,200,772 | 0 | A | G | 98.7% | 288.7 / NA | 79 | V12A (GTC→GCC) | intE | e14 prophage; putative integrase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (40/38); minor base C (0/1); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTC > NC_000913/1200625‑1200916 | tCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTg > 1:906465/1‑151 (MQ=255) aGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGa > 1:969135/1‑150 (MQ=255) gCCAGGCGGGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGTTTCTTTTGTCCCAAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGaa < 2:386722/150‑1 (MQ=255) ccgggCGAGTGTTGGCCTCAGTGGCAATAGCTATAGCTTCAGCTTCGTTTTTTCCAAAAGAATGAATTTTTCCTTTCATTGAATTCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTg < 2:1202455/144‑1 (MQ=255) cAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAAc > 2:399045/1‑150 (MQ=255) aGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACat > 2:882794/1‑151 (MQ=255) cGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACattat > 2:1110455/1‑151 (MQ=255) gAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTCCCCAAAGCATGGAATTTTCCTGTCACTGGATGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACattat < 1:501206/150‑1 (MQ=255) aGTTTTGGCCTCAGTGGCAATAGGAATAGTTTCAGCTTCTTTTGTCCCAAAAGCATGGATTTTTCCTGTCATTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACatta < 2:850250/148‑1 (MQ=255) gtgtTGGCCTCAGGGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGTATGGATTTTTCTTATCACTGGAGGATTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACatta < 2:431010/147‑1 (MQ=255) tgtTGGCCTCAGTGGCAATAGCGATATCTTCAGCTTCGTTTGTTCCAAAAGCATGAAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCt < 1:1082021/150‑1 (MQ=255) ggCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTAcgc > 1:721052/1‑151 (MQ=255) ggCCACAGTGGTAATAGCGATTCCTTCTGCTTCTTTTGTTCCCAAAGATGGGAATTTTCTTTTCGCTGCAGGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTa < 1:638374/148‑1 (MQ=255) tCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTc > 1:280347/1‑151 (MQ=255) gTGGAAATAGCGATAGCTTCAGCTTCGTTTTTCCCCAAAGCATGAAATTTTCCTGTCACTGGATGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTg < 2:959029/150‑1 (MQ=255) ggCAATAGCGATAGCTTCAGCTTCGTTTTTTCCCAAAGCATGGATTTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCt < 1:7752/151‑1 (MQ=255) cAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGc > 1:1173871/1‑151 (MQ=255) aaTAGCGATATTTTCAGCTTCTTTTGTCCCCAAAGCATGGATTTTTCTTGTCATTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGc < 2:1023700/150‑1 (MQ=255) aaTAGCGATAGCTTGAGTTTTTTTTTTTCCAAAAGCTTGATTTTTTCTTGTAAATGGATGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCt < 2:986299/148‑1 (MQ=255) aaTAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGcc > 1:948667/1‑151 (MQ=255) aTAGCGATCGCTTCAGCTTCGTTTGTCCCCAAAGCATGAAATTTTCCTGTCACTGGTTGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCa < 2:643485/151‑1 (MQ=255) tAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCAt > 1:105485/1‑151 (MQ=255) cGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTAc > 2:912647/1‑151 (MQ=255) agcttcagcttcGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCa > 2:361483/1‑150 (MQ=255) ttcagcttcGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAAt > 1:90488/1‑151 (MQ=255) tcagtttcGTTTTTTCCCAATGCTTGGAATTTTCCTGTCACTGAATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAAt < 2:1102291/150‑1 (MQ=255) agcttcGTTTTTCCCAAAAGCTTGGATTTTTCCTGCCTCTGGATGATTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATc < 2:577677/149‑1 (MQ=255) cGTTTGTCCCCAAAGCATGGAATTTCCCGGTCACTGAATGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTc < 1:101339/138‑1 (MQ=255) ttttttCCAAAAGCATGGAATTTTCCTGTCACGGTATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGt < 2:642340/145‑1 (MQ=255) tttGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCaa > 2:786938/1‑150 (MQ=255) tGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATACTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCaaaa < 1:877758/150‑1 (MQ=255) tCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTACACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTa > 2:741249/1‑150 (MQ=255) cccAAAGAATGAAATTTTCCTCTCCTTGGATCATTATCCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAAt < 1:662631/151‑1 (MQ=255) aaaGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATg > 2:100707/1‑149 (MQ=255) aaGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAg > 2:450314/1‑150 (MQ=255) atgtatttttCCTGTCTCTGGATGCTTAATCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCa < 2:257695/143‑1 (MQ=255) aTGCAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCAtt > 1:559431/1‑151 (MQ=255) ggATTTTTCCTGTCCTTGGATTTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCAt < 2:1158032/148‑1 (MQ=255) ttttCCTGTCACTGGATGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCt < 2:136637/150‑1 (MQ=255) ccTGTCACTGAGTGTTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGAt < 2:435565/150‑1 (MQ=255) cTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGAtt > 1:12536/1‑150 (MQ=255) cACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAgg > 1:546960/1‑151 (MQ=255) aCTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGgt < 1:340971/151‑1 (MQ=255) cTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACa < 2:940396/147‑1 (MQ=255) tgtatccTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAgg < 2:868350/142‑1 (MQ=255) gggATGCATATACCGCCAATAGTCTTTATTTACCTTCCGACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTa < 2:892871/143‑1 (MQ=255) gtatgttaataCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGgt < 2:984974/140‑1 (MQ=255) ggATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGtt > 2:557173/1‑151 (MQ=255) gATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGtt > 1:1201432/1‑150 (MQ=255) aTGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTAc > 2:569851/1‑151 (MQ=255) cTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCa > 1:997672/1‑150 (MQ=255) ataCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACt < 2:111714/150‑1 (MQ=255) ccGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTccc < 1:361181/150‑1 (MQ=255) ccGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTccc < 1:989729/150‑1 (MQ=255) cGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTcccc > 1:948584/1‑150 (MQ=255) aaTAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCaact > 2:426447/1‑150 (MQ=255) aTAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCaactaa < 1:120901/151‑1 (MQ=255) tAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCaactaac > 2:791473/1‑151 (MQ=255) aGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCaactaac < 1:361495/150‑1 (MQ=255) gACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTc < 2:505664/151‑1 (MQ=255) tttatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGc > 1:231126/1‑151 (MQ=255) ttatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCgg < 1:1079619/149‑1 (MQ=255) tatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGt > 2:127355/1‑151 (MQ=255) tatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGt > 2:1012102/1‑151 (MQ=255) atttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGt < 2:948665/150‑1 (MQ=255) ccTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCAc > 1:1175608/1‑151 (MQ=255) actaTAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACt < 1:882798/149‑1 (MQ=255) tataAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGcc > 2:504911/1‑151 (MQ=255) ataAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGcc > 1:1173881/1‑150 (MQ=255) ataAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGcc < 2:144606/150‑1 (MQ=255) aaGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATaa < 1:88939/151‑1 (MQ=255) aGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAAc > 2:36743/1‑151 (MQ=255) cGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCg > 1:749795/1‑151 (MQ=255) ataATTTAGGGCCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTATTGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCGAACTAACCCGGCGTCCGCACGCACTCGCCATAACCGGCCta < 2:628194/151‑2 (MQ=255) aGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGtt > 2:949197/1‑151 (MQ=255) gTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGttt > 1:1124214/1‑151 (MQ=255) gTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGttt > 1:57070/1‑151 (MQ=255) ttAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTc > 1:655920/1‑151 (MQ=255) tAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTc > 2:848493/1‑150 (MQ=255) | TCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCAACTAACTCGGCGTCCTCACGCACTCGCCATAACCGGCCTTGTTTC > NC_000913/1200625‑1200916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |