Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 296,092 A→G R335R (CGT→CGC)  intF ← CP4‑6 prophage; putative phage integrase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913296,0920AG100.0% 347.1 / NA 88R335R (CGT→CGC) intFCP4‑6 prophage; putative phage integrase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (43/45);  total (43/45)

GCTCTGTTGTGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATACGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGATTATTGAGGCT  >  NC_000913/295946‑296238
                                                                                                                                                  |                                                                                                                                                  
gCTCTGTTGTGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGtt                                                                                                                                                <  2:1092172/151‑1 (MQ=255)
gCTCTGTTGTGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGt                                                                                                                                                 <  1:33890/150‑1 (MQ=255)
   ctGTTGTGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCAc                                                                                                                                             >  1:161485/1‑151 (MQ=255)
     gttgtGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCAc                                                                                                                                             <  2:1020539/149‑1 (MQ=255)
      ttgtGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCtt                                                                                                                                          >  2:750485/1‑151 (MQ=255)
        gtgCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTc                                                                                                                                         <  1:530238/150‑1 (MQ=255)
        gtgCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTc                                                                                                                                         <  1:202753/150‑1 (MQ=255)
        gtgCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCg                                                                                                                                        <  1:871363/151‑1 (MQ=255)
        gtgCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCg                                                                                                                                        >  1:958490/1‑151 (MQ=255)
        gtgCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCg                                                                                                                                        <  1:389963/151‑1 (MQ=255)
             cTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCtt                                                                                                                                   >  1:704277/1‑151 (MQ=255)
                aaCGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTc                                                                                                                                >  1:1127266/1‑151 (MQ=255)
                 aCGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCt                                                                                                                               <  2:505377/151‑1 (MQ=255)
                 aCGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCt                                                                                                                               <  2:32140/151‑1 (MQ=255)
                  cgcgGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCtt                                                                                                                              <  1:295066/151‑1 (MQ=255)
                       cTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAAtt                                                                                                                         >  2:709174/1‑151 (MQ=255)
                        tCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTc                                                                                                                        >  2:1025531/1‑151 (MQ=255)
                           ataatTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCa                                                                                                                     <  1:165678/151‑1 (MQ=255)
                            taatTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCAt                                                                                                                    >  1:1073131/1‑151 (MQ=255)
                             aatTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCAt                                                                                                                    <  2:826937/150‑1 (MQ=255)
                                 ttGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCtt                                                                                                                <  1:1117226/150‑1 (MQ=255)
                                 ttGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTg                                                                                                               >  2:846855/1‑151 (MQ=255)
                                  tGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTg                                                                                                               <  1:1025290/150‑1 (MQ=255)
                                  tGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTg                                                                                                               <  1:983193/150‑1 (MQ=255)
                                    ccACCTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGAcc                                                                                                            >  2:1135525/1‑151 (MQ=255)
                                     cACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGAcc                                                                                                            >  2:444309/1‑150 (MQ=255)
                                     cACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGAcc                                                                                                            >  1:483742/1‑150 (MQ=255)
                                       cTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCAtt                                                                                                         >  2:378725/1‑151 (MQ=255)
                                         tttACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCAtt                                                                                                         <  2:241844/149‑1 (MQ=255)
                                         tttACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCAtt                                                                                                         <  2:47110/149‑1 (MQ=255)
                                            aCTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGaa                                                                                                     >  1:184531/1‑150 (MQ=255)
                                             cTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAAt                                                                                                   >  1:740102/1‑151 (MQ=255)
                                             cTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAAt                                                                                                   >  2:269597/1‑151 (MQ=255)
                                                  aCTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACg                                                                                              <  1:1095431/151‑1 (MQ=255)
                                                  aCTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACg                                                                                              >  2:595486/1‑151 (MQ=255)
                                                    ttCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTc                                                                                            >  2:1072526/1‑151 (MQ=255)
                                                       tGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTg                                                                                          >  1:1029255/1‑150 (MQ=255)
                                                        gAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTg                                                                                          <  2:245853/149‑1 (MQ=255)
                                                        gAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGa                                                                                         <  1:1176350/150‑1 (MQ=255)
                                                        gAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGAc                                                                                        <  1:1185453/151‑1 (MQ=255)
                                                             cccaacccTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCagcg                                                                                   <  1:901810/151‑1 (MQ=255)
                                                             cccaacccTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCagcg                                                                                   >  2:835200/1‑151 (MQ=255)
                                                                  cccTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCagcgaagcg                                                                              <  1:778222/151‑1 (MQ=255)
                                                                   cctcctTATTTACGTCAGAGTTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCagcgaagcg                                                                              >  1:710653/1‑150 (MQ=255)
                                                                      cctTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGAc                                                                            <  2:584563/149‑1 (MQ=255)
                                                                       ctTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGc                                                                          >  1:157218/1‑150 (MQ=255)
                                                                         tATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAAt                                                                       >  2:111698/1‑151 (MQ=255)
                                                                          aTTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAAt                                                                       <  1:924962/150‑1 (MQ=255)
                                                                            ttACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATttc                                                                    >  2:346565/1‑151 (MQ=255)
                                                                                 tCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCAc                                                               >  2:140053/1‑151 (MQ=255)
                                                                                   aGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGc                                                             >  2:832763/1‑151 (MQ=255)
                                                                                     aaTTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCg                                                           >  2:265228/1‑151 (MQ=255)
                                                                                      aTTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCg                                                           >  1:301333/1‑150 (MQ=255)
                                                                                      aTTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGa                                                          <  1:423219/151‑1 (MQ=255)
                                                                                            ggATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCa                                                    <  1:853936/151‑1 (MQ=255)
                                                                                             gATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAg                                                   <  1:337505/151‑1 (MQ=255)
                                                                                                tGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTg                                                 <  1:777964/150‑1 (MQ=255)
                                                                                                      aGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCaaaa                                          <  1:792338/151‑1 (MQ=255)
                                                                                                      aGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCaaa                                           <  2:970106/150‑1 (MQ=255)
                                                                                                         aCATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAg                                         >  2:340482/1‑149 (MQ=255)
                                                                                                         aCATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGt                                        <  1:271391/150‑1 (MQ=255)
                                                                                                         aCATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGt                                        <  1:702236/150‑1 (MQ=255)
                                                                                                              tAACAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTgg                                  >  1:785318/1‑151 (MQ=255)
                                                                                                               aaCAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTgg                                  >  2:295620/1‑150 (MQ=255)
                                                                                                               aaCAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGga                                 <  2:707377/151‑1 (MQ=255)
                                                                                                                aCAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTgg                                  >  1:373552/1‑149 (MQ=255)
                                                                                                                 cAATTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGgaga                               <  1:190606/151‑1 (MQ=255)
                                                                                                                   aTTCAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATa                             <  2:1156638/151‑1 (MQ=255)
                                                                                                                      cAGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGc                          >  1:1096335/1‑151 (MQ=255)
                                                                                                                       aGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGcc                         >  2:953132/1‑151 (MQ=255)
                                                                                                                       aGAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGcc                         >  1:618033/1‑151 (MQ=255)
                                                                                                                        gAAACATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCg                        <  2:985528/151‑1 (MQ=255)
                                                                                                                           aCATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATg                     >  2:674728/1‑151 (MQ=255)
                                                                                                                           aCATAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATg                     <  2:71897/151‑1 (MQ=255)
                                                                                                                             aTAAGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCa                   <  2:161520/151‑1 (MQ=255)
                                                                                                                               aaGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCaa                  <  1:819325/150‑1 (MQ=255)
                                                                                                                               aaGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAAt                 >  1:451432/1‑151 (MQ=255)
                                                                                                                                aGGAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAAt                 >  2:689870/1‑150 (MQ=255)
                                                                                                                                 ggAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAAt                 >  2:147361/1‑149 (MQ=255)
                                                                                                                                 ggAGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAAt                 >  1:94888/1‑149 (MQ=255)
                                                                                                                                   aGTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAgg              >  1:567042/1‑150 (MQ=255)
                                                                                                                                    gTGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGat            >  2:481670/1‑151 (MQ=255)
                                                                                                                                     tGAGAGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCTATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGat            <  2:687579/150‑1 (MQ=255)
                                                                                                                                      gagaGGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGatt           <  1:37/150‑1 (MQ=255)
                                                                                                                                        gagGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGattatt        >  1:775259/1‑151 (MQ=255)
                                                                                                                                        gagGGATGATGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGattat         <  2:748508/150‑1 (MQ=255)
                                                                                                                                            gatgatGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGATTATTGAgg    <  2:1073380/151‑1 (MQ=255)
                                                                                                                                             atgatgCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGATTATTGAGGc   >  2:138036/1‑151 (MQ=255)
                                                                                                                                               gatGCGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGATTATTGAGGCt  <  1:709005/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
GCTCTGTTGTGCGCTGAACGCGGCTCAATAATTTTGCCACTTTTACTGTTACTTCTGAAAACCCAACCCTCCTTATTTACGTCAGAATTTGGGGATTGCGCTAGTACATTTAACAATTCAGAAACATAAGGAGTGAGAGGGATGATACGTTCACCTTCGATCTTGTCTTTAATTCGCATGCTTGACCATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAGCAAAAGTACTTGGAGATAGGCCGATGCAATAGGATTATTGAGGCT  >  NC_000913/295946‑296238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑