Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,646,854 C→T intergenic (+117/+320) flxA → / ← intK Qin prophage; uncharacterized protein/pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,646,8540CT100.0% 262.4 / NA 69intergenic (+117/+320)flxA/intKQin prophage; uncharacterized protein/pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (40/29);  total (40/29)

ATACCGCTGGCACCATTGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGACGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGC  >  NC_000913/1646706‑1647001
                                                                                                                                                    |                                                                                                                                                   
aTACCGCTGGCACCATTGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGc                                                                                                                                                   >  2:335313/1‑151 (MQ=255)
             cATTGATATTTACGTCTAAGTGACAGCCGTATTGTTGCCCTCATCGGACCACTTTTCGCCATCAGCATTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGCTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAg                                                                                                                                       >  1:528923/1‑150 (MQ=255)
             cATTGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGt                                                                                                                                      >  2:480893/1‑151 (MQ=255)
              aTTGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTc                                                                                                                                     <  2:823260/151‑1 (MQ=255)
                tGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCt                                                                                                                                    <  2:1063621/150‑1 (MQ=255)
                  atatTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTAtt                                                                                                                                 >  1:360357/1‑151 (MQ=255)
                   tatTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTAttt                                                                                                                                >  2:272121/1‑151 (MQ=255)
                   tatTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTAttt                                                                                                                                >  2:1016841/1‑151 (MQ=255)
                    atTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTa                                                                                                                               <  2:729334/151‑1 (MQ=255)
                                gTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAg                                                                                                                   <  2:317921/151‑1 (MQ=255)
                                     aGCTGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTa                                                                                                               <  1:335234/150‑1 (MQ=255)
                                     aGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTa                                                                                                               >  1:1172726/1‑150 (MQ=255)
                                       ccGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACt                                                                                                            >  2:111802/1‑151 (MQ=255)
                                         gTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTg                                                                                                           >  1:799501/1‑150 (MQ=255)
                                           aTTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGAc                                                                                                         >  1:659265/1‑150 (MQ=255)
                                               tgGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAAccc                                                                                                    >  1:984118/1‑151 (MQ=255)
                                                ggCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAAccc                                                                                                    <  1:976731/150‑1 (MQ=255)
                                                 gCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCAt                                                                                                  <  2:141919/151‑1 (MQ=255)
                                                 gCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCAt                                                                                                  <  2:159042/151‑1 (MQ=255)
                                                  cccTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATg                                                                                                 >  1:834865/1‑151 (MQ=255)
                                                      cATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGAt                                                                                               <  1:172000/149‑1 (MQ=255)
                                                       aTCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCaa                                                                                            <  1:321329/151‑1 (MQ=255)
                                                       aTCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCa                                                                                             >  1:1064150/1‑150 (MQ=255)
                                                         cGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAAt                                                                                           <  1:685038/150‑1 (MQ=255)
                                                           ggCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAAtt                                                                                          <  1:1098324/149‑1 (MQ=255)
                                                              cACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGaa                                                                                     <  2:13994/151‑1 (MQ=255)
                                                              cACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGaa                                                                                     <  1:720964/151‑1 (MQ=255)
                                                                   ttCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGc                                                                                 >  2:877210/1‑150 (MQ=255)
                                                                     cGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAAc                                                                              >  2:855953/1‑151 (MQ=255)
                                                                        cATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTAt                                                                           <  2:658807/151‑1 (MQ=255)
                                                                           cAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTAttt                                                                         >  2:173457/1‑150 (MQ=255)
                                                                            aGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCt                                                                       >  2:1127516/1‑151 (MQ=255)
                                                                            aGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCt                                                                       >  2:268882/1‑151 (MQ=255)
                                                                                 tttCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGt                                                                  >  2:734904/1‑151 (MQ=255)
                                                                                      ttAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCa                                                                <  2:225961/148‑1 (MQ=255)
                                                                                       tAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACttt                                                            >  2:648808/1‑151 (MQ=255)
                                                                                         aaGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACtttt                                                           >  2:476057/1‑150 (MQ=255)
                                                                                          aGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTtgt                                                         >  2:736615/1‑151 (MQ=255)
                                                                                            aCATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTgg                                                       >  1:510541/1‑151 (MQ=255)
                                                                                             cATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTggg                                                      <  2:1141339/151‑1 (MQ=255)
                                                                                                    tCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTc                                               >  1:508733/1‑151 (MQ=255)
                                                                                                    tCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTc                                               >  1:474688/1‑151 (MQ=255)
                                                                                                    tCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTc                                               >  2:611192/1‑151 (MQ=255)
                                                                                                       ttGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTc                                               <  1:288632/148‑1 (MQ=255)
                                                                                                        tGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCcac                                            >  1:646406/1‑150 (MQ=255)
                                                                                                         gTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACaa                                          <  1:1150700/151‑1 (MQ=255)
                                                                                                             cATTTCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACt                                      >  1:46876/1‑151 (MQ=255)
                                                                                                               tttCTGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGc                                    >  1:1134889/1‑151 (MQ=255)
                                                                                                                   tGATAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAAc                                >  2:8179/1‑151 (MQ=255)
                                                                                                                     aTAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCTCTTTTGTGGGGACAGTCCACAAAACTGCCAAc                                <  1:579089/149‑1 (MQ=255)
                                                                                                                     aTAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACtt                              >  1:1007326/1‑151 (MQ=255)
                                                                                                                      tAGTTAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTc                             >  1:32165/1‑151 (MQ=255)
                                                                                                                         ttAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGc                          >  1:670870/1‑151 (MQ=255)
                                                                                                                         ttAACATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGc                          >  2:645461/1‑151 (MQ=255)
                                                                                                                           aaCATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGctt                        <  2:500890/151‑1 (MQ=255)
                                                                                                                           aaCATTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGctt                        <  2:355483/151‑1 (MQ=255)
                                                                                                                              aTTACAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGcttctt                     <  2:1172984/151‑1 (MQ=255)
                                                                                                                                 aCAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGct                  <  2:966030/151‑1 (MQ=255)
                                                                                                                                  cAAGATATAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGctc                 >  1:566155/1‑151 (MQ=255)
                                                                                                                                      atatAAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCTCTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAg             <  1:938590/151‑1 (MQ=255)
                                                                                                                                        ataAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGc            <  1:268821/150‑1 (MQ=255)
                                                                                                                                        ataAGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCg           >  1:193993/1‑151 (MQ=255)
                                                                                                                                          aaGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCgg          >  2:777101/1‑150 (MQ=255)
                                                                                                                                          aaGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCgg          <  1:621587/150‑1 (MQ=255)
                                                                                                                                           aGTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGAc        <  1:480775/151‑1 (MQ=255)
                                                                                                                                            gTAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGAc        >  2:1105015/1‑150 (MQ=255)
                                                                                                                                             tAATGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACAt      >  2:759854/1‑151 (MQ=255)
                                                                                                                                               aTGGATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACAtt     >  2:625145/1‑150 (MQ=255)
                                                                                                                                                 ggATGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGc  <  2:529057/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ATACCGCTGGCACCATTGATATTTACGTCTAAGTGACAGCCGTATTGTGGCCCTCATCGGGCCACTTTTCGCCATCAGCCTTTTCTTTAAAGACATATTATCTTTGTATCATTTCTGATAGTTAACATTACAAGATATAAGTAATGGACGCACTCCCAATTAGTCTATTTAAATCGCCACGAGTTTAACTGACAACCCATGATCAATTATGAATTGCAACTATTTCTGTAGTCACTTTTGTGGGGACAGTCCACAAAACTGCCAACTTCCGCTTCTTGCTCTTAGCGGACATTAGC  >  NC_000913/1646706‑1647001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑