| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,967,082 | T→C | K119R (AAA→AGA) | cheY ← | chemotaxis regulator transmitting signal to flagellar motor component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,967,082 | 0 | T | C | 98.5% | 249.0 / NA | 65 | K119R (AAA→AGA) | cheY | chemotaxis regulator transmitting signal to flagellar motor component |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (36/28); total (37/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTTCCCGCAAACTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑TTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAA > NC_000913/1966934‑1967223 | aGTTCCCGCAAACTGTCGCGCAGCATACGCGTCAGGCTGCCGATGTGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGCTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGt‑ctt < 2:22410/151‑1 (MQ=255) ccGCAAACTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTtcctc < 2:32859/151‑1 (MQ=255) aaaCTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGc < 1:1102994/151‑1 (MQ=255) aaaCTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGc > 1:1023155/1‑151 (MQ=255) aaCTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGTTGGTTGCTCCATAGTCGCTCCCTCCCATCCCCAG‑TTCTCAAAAGTTTTTGTT‑AGTCTTTTCCTCCa > 1:595035/1‑148 (MQ=255) aCTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGt > 1:1169969/1‑151 (MQ=255) cTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTc > 2:924766/1‑151 (MQ=255) tGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTcg > 1:763969/1‑151 (MQ=255) gTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCACTGATATCGCCAGCTGAACGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTc < 1:814015/149‑1 (MQ=255) gTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTcgc < 2:1025846/151‑1 (MQ=255) cgcAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCgcggcg < 1:1042242/151‑1 (MQ=255) agcaTACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTa < 2:40879/151‑1 (MQ=255) gcaTACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTa > 2:394542/1‑150 (MQ=255) cgTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATTGCtt > 1:620996/1‑151 (MQ=255) cgTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCtt < 1:53902/151‑1 (MQ=255) cAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTcac > 1:563392/1‑151 (MQ=255) cAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTca < 1:1195592/150‑1 (MQ=255) tGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACcaca > 1:228041/1‑150 (MQ=255) aaTGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGcccc > 1:489572/1‑151 (MQ=255) aTGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGccccc < 1:458146/151‑1 (MQ=255) atatCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCt < 1:421352/151‑1 (MQ=255) tatCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCtt > 2:995496/1‑151 (MQ=255) tatCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCtt > 2:525177/1‑151 (MQ=255) gAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCgcagca < 2:618428/151‑1 (MQ=255) gAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCgcagc < 1:248432/150‑1 (MQ=255) aaTGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCgcagca > 2:1043907/1‑150 (MQ=255) aaTGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCaa < 2:1016223/151‑1 (MQ=255) aTGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAat > 2:527081/1‑151 (MQ=255) tGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAatg > 2:154285/1‑151 (MQ=255) gCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAatg < 2:60415/150‑1 (MQ=255) gTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTtctc < 1:485631/146‑1 (MQ=255) gTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTtctc > 2:485749/1‑146 (MQ=255) gTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCtctttct > 2:198438/1‑151 (MQ=255) tgattgatGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTttcttc < 1:243188/150‑1 (MQ=255) tgattgatGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTttcttc < 1:533286/150‑1 (MQ=255) attgatGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCt < 2:606603/151‑1 (MQ=255) tgatGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTc > 2:537592/1‑151 (MQ=255) atGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTg < 1:935037/151‑1 (MQ=255) gTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCCCCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAg < 1:313744/151‑1 (MQ=255) gTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCTCATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAg < 1:948916/151‑1 (MQ=255) gCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCTCCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCa < 1:376953/151‑1 (MQ=255) gCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTc > 2:164129/1‑150 (MQ=255) gCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTc < 2:7839/150‑1 (MQ=255) catAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCAt > 2:564777/1‑151 (MQ=255) tCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAac > 2:930113/1‑150 (MQ=255) gCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACt > 1:497720/1‑151 (MQ=255) gCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACt < 1:1089909/151‑1 (MQ=255) tCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAAt > 1:514146/1‑151 (MQ=255) aTGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGcc > 1:1039533/1‑150 (MQ=255) aTGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCg > 2:523327/1‑151 (MQ=255) tGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCg > 1:512153/1‑150 (MQ=255) gCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGAc > 2:697596/1‑151 (MQ=255) ccAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACAt < 2:44286/151‑1 (MQ=255) ccAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACAt > 1:141078/1‑151 (MQ=255) cAGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATc < 1:5310/151‑1 (MQ=255) aGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATcg > 2:1030648/1‑151 (MQ=255) aGTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATc > 1:457936/1‑150 (MQ=255) gTTTCTC‑AAGGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATcgc > 1:871930/1‑151 (MQ=255) gTTTCTC‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTTGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGATATcgc > 1:80769/1‑151 (MQ=255) ctc‑AAAGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGcc > 2:853109/1‑150 (MQ=255) aaaGATTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATcc > 2:450551/1‑151 (MQ=255) aTTTTGTTGAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCAc < 2:578175/151‑1 (MQ=255) ttgttgAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTTTTCGCTTTTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGa > 1:980024/1‑150 (MQ=255) ttgttgAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGa > 1:484441/1‑150 (MQ=255) ttgttgAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGa > 2:504522/1‑150 (MQ=255) tgttgAGT‑CTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGaa < 2:1189371/150‑1 (MQ=255) | AGTTCCCGCAAACTGTCGCGCAGCATACGCGTCAGGCTGCCGATGCGCGCAATGATATCGCCAGCTGAATGCTCGTCAGCAGGTTTGATTGATGGTTGCATCATAGTCGCATCCTCACATGCCCAGTTTCTC‑AAAGATTTTGTTGAGT‑TTTTCCTCCAGCGTCGCGGCGGTAAATGGCTTCACCACATAGCCACTGGCCCCCGCTTGCGCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAA > NC_000913/1966934‑1967223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |