Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,338,117	(A)8→7	intergenic (‑188/+137)	adiY ← / ← adiA	adi system transcriptional activator/arginine decarboxylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,338,110	0	A	.	100.0%	361.7 / NA	76	intergenic (‑181/+144)	adiY/adiA	adi system transcriptional activator/arginine decarboxylase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (49/27);  total (49/27)

GTTCTCGCTAAAGCAAAGCGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGCAAAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGTGGTT  >  NC_000913/4337961‑4338255                                                                                                                                                      |                                                                                                                                                  gTTCTCGCTAAAGCAAAGCGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGCaa                                                                                                                                                  <  2:992708/151‑1 (MQ=255)      cGCTAAAGCAAAGCGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGCaaaa                                                                                                                                                <  1:163804/148‑1 (MQ=255)            agcaaagcGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCgg                                                                                                                                      <  2:345883/151‑1 (MQ=255)            agcaaagcGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCgg                                                                                                                                      >  1:660934/1‑151 (MQ=255)               aaagcGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGt                                                                                                                                   >  2:794239/1‑151 (MQ=255)                 agcGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTgg                                                                                                                                 >  1:656055/1‑151 (MQ=255)                      tACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCcg                                                                                                                            >  1:363065/1‑151 (MQ=255)                      tACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCcg                                                                                                                            >  1:558844/1‑151 (MQ=255)                        ccGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCcgc                                                                                                                           >  2:246803/1‑150 (MQ=255)                         cGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCgcgc                                                                                                                         >  2:919699/1‑151 (MQ=255)                         cGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCgcgc                                                                                                                         >  2:726564/1‑151 (MQ=255)                          gggAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCgcgc                                                                                                                         >  1:878795/1‑150 (MQ=255)                             aaaTGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCAGGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCaaaa                                                                                                                     <  1:966321/151‑1 (MQ=255)                              aaTGGTTATATAATTGTATGAGGAATATAAACGGGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCaaaaa                                                                                                                    <  1:479873/151‑1 (MQ=255)                                 ggTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGt                                                                                                                  >  1:677993/1‑150 (MQ=255)                                      tataATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGAc                                                                                                             <  1:404224/150‑1 (MQ=255)                                       ataATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACAt                                                                                                           >  2:387049/1‑151 (MQ=255)                                         aaTTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACAtt                                                                                                          <  2:727184/150‑1 (MQ=255)                                            tGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACAttttt                                                                                                       <  1:480959/150‑1 (MQ=255)                                             gTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTtttgt                                                                                                     >  1:61836/1‑151 (MQ=255)                                             gTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTtttgt                                                                                                     >  1:788359/1‑151 (MQ=255)                                              tATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTtttgtt                                                                                                    >  1:724819/1‑151 (MQ=255)                                              tATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTACTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTtttgt                                                                                                     <  2:514562/150‑1 (MQ=255)                                                  atgaATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTgc                                                                                                 >  2:966110/1‑150 (MQ=255)                                                   tgaATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCAGCGCAAAAAGTATGACATTtttgtt                                                                                                    >  2:661528/1‑146 (MQ=255)                                                     aaTATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTgcagca                                                                                             <  1:6060/151‑1 (MQ=255)                                                      atatAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTgcagca                                                                                             >  1:715293/1‑150 (MQ=255)                                                        ataAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAAtt                                                                                          >  2:801746/1‑151 (MQ=255)                                                        ataAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAAtt                                                                                          >  1:804713/1‑151 (MQ=255)                                                          aaaCATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAAtttt                                                                                        >  2:437650/1‑151 (MQ=255)                                                          aaaCATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAAtttt                                                                                        >  1:230934/1‑151 (MQ=255)                                                             cATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTAt                                                                                     <  2:437944/151‑1 (MQ=255)                                                             cATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTAt                                                                                     >  1:219233/1‑151 (MQ=255)                                                                       aaTAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTg                                                                           <  2:706114/151‑1 (MQ=255)                                                                        aTAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGACAACGTTGc                                                                          >  2:17684/1‑151 (MQ=255)                                                                        aTAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGc                                                                          <  2:549777/151‑1 (MQ=255)                                                                        aTAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGc                                                                          >  2:955971/1‑151 (MQ=255)                                                                          aaCGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGcc                                                                         >  2:356357/1‑150 (MQ=255)                                                                          aaCGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGcc                                                                         >  1:46603/1‑150 (MQ=255)                                                                          aaCGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCa                                                                        <  2:48432/151‑1 (MQ=255)                                                                          aaCGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCa                                                                        <  2:230904/151‑1 (MQ=255)                                                                           aCGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCAt                                                                       >  1:614673/1‑151 (MQ=255)                                                                                 tttACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCa                                                                  >  2:786285/1‑150 (MQ=255)                                                                                   tACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCaaa                                                                >  2:523931/1‑150 (MQ=255)                                                                                    aCTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCaaaa                                                               <  2:660862/150‑1 (MQ=255)                                                                                    aCTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCaaaa                                                               <  1:612221/150‑1 (MQ=255)                                                                                      tAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGc                                                            >  1:543038/1‑151 (MQ=255)                                                                                        aTAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCt                                                          >  1:828811/1‑151 (MQ=255)                                                                                          aGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTa                                                         >  1:502413/1‑150 (MQ=255)                                                                                              cAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGcc                                                    >  2:106527/1‑151 (MQ=255)                                                                                                  tttttATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAggc                                                >  2:151505/1‑151 (MQ=255)                                                                                                   ttttATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAggcg                                               >  2:200819/1‑151 (MQ=255)                                                                                                     ttATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAggcggc                                             >  1:425130/1‑151 (MQ=255)                                                                                                       ataGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAggcggc                                             <  1:427276/149‑1 (MQ=255)                                                                                                         aGTAATTTCTCATGTACATATTTTTTTCCAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAggcggc                                             <  1:736636/147‑1 (MQ=255)                                                                                                         aGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTa                                          >  1:480528/1‑150 (MQ=255)                                                                                                              tttCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGtt                                     >  1:742617/1‑150 (MQ=255)                                                                                                              tttCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGtt                                     >  1:189176/1‑150 (MQ=255)                                                                                                              tttCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGtt                                     >  1:42845/1‑150 (MQ=255)                                                                                                               ttCTCATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTa                                    <  2:676994/150‑1 (MQ=255)                                                                                                                   cATGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTa                                >  2:838558/1‑150 (MQ=255)                                                                                                                     tGTACATATTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAAc                             >  1:336868/1‑151 (MQ=255)                                                                                                                          atatTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAAtt                         >  1:729354/1‑150 (MQ=255)                                                                                                                            atTTTTTTACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACg                      <  2:878713/151‑1 (MQ=255)                                                                                                                             tttttttACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTAct                      <  1:983789/150‑2 (MQ=255)                                                                                                                              ttttttACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGc                     <  2:308558/150‑1 (MQ=255)                                                                                                                              ttttttACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGc                     <  1:164288/150‑1 (MQ=255)                                                                                                                                ttttACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCtt                  >  1:841275/1‑151 (MQ=255)                                                                                                                                  ttACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTc                 <  2:992415/150‑1 (MQ=255)                                                                                                                                   tACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTc                 >  2:780224/1‑149 (MQ=255)                                                                                                                                   tACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTc                 >  2:349646/1‑149 (MQ=255)                                                                                                                                   tACAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTc                 >  1:760896/1‑149 (MQ=255)                                                                                                                                     cAGGATAAATAACAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCg             <  1:243283/151‑1 (MQ=255)                                                                                                                                         ataaataaCAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAAt         <  2:828735/151‑1 (MQ=255)                                                                                                                                            aataaCAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGt      <  2:508502/151‑1 (MQ=255)                                                                                                                                               aaCAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGTGGt   >  2:252043/1‑151 (MQ=255)                                                                                                                                                aCAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGTGGtt  <  1:439067/151‑1 (MQ=255)                                                                                                                                                 cAGGC‑AAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGTGGtt  >  2:776471/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GTTCTCGCTAAAGCAAAGCGATACCGGGAAATGGTTATATAATTGTATGATGAATATAAACATGCATAAAAATAACGAGTTTTACTAATAGTACAAATTTTTATAGTAATTTCTCATGTACATATTTTTTTACAGGATAAATAACAGGCAAAAAAAAGCGCGGGGTGGGGCCGCGCAAAAAGTATGACATTTTTGTTTGCAGCAATTTTTATGAAAACGTTGCCATACTCAAAAGGCCTAAGGCCAGGCGGCGTAATGTTATTTAAACAATTACGCCTTCAGCGGAATAGTGGTT  >  NC_000913/4337961‑4338255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑