| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,018,356 | (GTC)4→3 | coding (2297‑2299/3099 nt) | ygfK → | putative Fe‑S subunit oxidoreductase subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3018347 | 3018349 | 3 | 62 [0] | [0] 62 | ygfK | putative Fe‑S subunit oxidoreductase subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3018350 = | 0 (0.000) | 60 (1.030) | 53/280 | 0.2 | 100% | coding (2291/3099 nt) | ygfK | putative Fe‑S subunit oxidoreductase subunit |
| ? | NC_000913 | = 3018346 | 0 (0.000) | coding (2287/3099 nt) | ygfK | putative Fe‑S subunit oxidoreductase subunit | |||||
AGAGATGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCAGGATACTGAAGCCCTGAATGCGATGGGCGTGCCGCTGGACAAAAACGGCTGGCCAGACGTCGACCA > NC_000913/3018204‑3018491 | agagATGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgt < 1:55302‑M2/151‑9 (MQ=255) gagaTGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtc > 1:67434‑M2/1‑142 (MQ=255) tGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggt < 1:481494‑M2/151‑14 (MQ=255) gCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggtt > 1:320181‑M2/1‑137 (MQ=255) ccGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttg < 1:966875‑M2/150‑16 (MQ=255) cGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaa > 1:31747‑M2/1‑134 (MQ=255) cATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaac < 2:290530‑M2/151‑20 (MQ=255) tGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaacc < 1:935566‑M2/150‑21 (MQ=255) cgAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCTGTTTCCTGAATAATCCGGAACGTTTCGCTGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatg < 2:876814‑M2/149‑25 (MQ=255) gAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaa > 1:999238‑M2/1‑124 (MQ=255) aaGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAAGCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatga > 2:951562‑M2/1‑123 (MQ=255) gagTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacag > 2:98935‑M2/1‑121 (MQ=255) agaagCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactg > 2:478231‑M2/1‑113 (MQ=255) gTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgta > 2:706932‑M2/1‑107 (MQ=255) ttGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgt < 2:518911‑M2/149‑44 (MQ=255) cACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagaca > 2:365648‑M2/1‑103 (MQ=255) acgGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcct > 1:590022‑M2/1‑99 (MQ=255) ggCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctg < 1:121925‑M2/150‑54 (MQ=255) cGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatc < 2:6505‑M2/151‑57 (MQ=255) agTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgc < 1:232439‑M2/151‑62 (MQ=255) agTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgc < 2:202787‑M2/151‑62 (MQ=255) cGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattg < 1:795756‑M2/151‑67 (MQ=255) ccTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaa > 2:935482‑M2/1‑80 (MQ=255) ccTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtga < 1:51892‑M2/150‑71 (MQ=255) cTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaac < 1:891830‑M2/151‑73 (MQ=255) taatCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagc < 2:767491‑M2/149‑76 (MQ=255) tCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggat < 1:836110‑M2/151‑81 (MQ=255) ccGGAACGTTTCGATGCTGATGGCCCCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggata > 1:441653‑M2/1‑70 (MQ=255) tgaACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatact < 2:145087‑M2/150‑84 (MQ=255) gAACGTTTCGATGCTGATGGCCCCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactg > 1:976696‑M2/1‑67 (MQ=255) cGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactga < 1:298134‑M2/149‑86 (MQ=255) gTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagc < 1:626255‑M2/151‑89 (MQ=255) cGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctg > 2:600696‑M2/1‑59 (MQ=255) cGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctg < 2:372556‑M2/151‑93 (MQ=255) cGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccct > 2:208942‑M2/1‑59 (MQ=255) cGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccct > 1:812147‑M2/1‑59 (MQ=255) gATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctg < 1:528893‑M2/150‑93 (MQ=255) aTGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaa > 1:844532‑M2/1‑57 (MQ=255) tGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaat < 2:64561‑M2/151‑96 (MQ=255) cTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgc < 2:728851‑M2/151‑98 (MQ=255) aTGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgat < 2:106943‑M2/151‑101 (MQ=255) aTGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgat > 1:262677‑M2/1‑51 (MQ=255) gCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatggg < 2:424138‑M2/151‑104 (MQ=255) aCCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcg < 2:714456‑M2/151‑106 (MQ=255) ccTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgt < 1:27695‑M2/151‑107 (MQ=255) cTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtg < 2:240979‑M2/151‑108 (MQ=255) cTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtg < 2:134079‑M2/151‑108 (MQ=255) aaCCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccg < 1:918780‑M2/151‑111 (MQ=255) cTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctg < 2:90532‑M2/151‑114 (MQ=255) cTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctg < 1:869049‑M2/151‑114 (MQ=255) cTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctg < 1:978996‑M2/151‑114 (MQ=255) cgcgTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggaca > 2:711887‑M2/1‑34 (MQ=255) cgTTATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaa < 1:146797‑M2/150‑119 (MQ=255) ttATGTCGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaa > 2:980932‑M2/1‑30 (MQ=255) cGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctg < 1:12700‑M2/151‑128 (MQ=255) cGCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctg < 1:366605‑M2/151‑128 (MQ=255) gCTTGGCGAACCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctgg < 1:569279‑M2/151‑129 (MQ=255) aCCGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctggccagacgtc > 2:915256‑M2/1‑14 (MQ=255) ccGGATGAGAAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctggccagacgtcg < 1:746911‑M2/151‑139 (MQ=255) gagaAAGgtcgtcgtccggttgaaaccattgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctggccagacgtcgaccat > 2:330807‑M2/1‑7 (MQ=255) gagaAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctggccagacgtcgaccata > 2:232410‑M2/1‑7 (MQ=255) agaAAGgtcgtcgtccggttgaaaccaatgaaacagtaacactgcttgtagacagcctgatcaccgccattggtgaacagcaggatactgaagccctgaatgcgatgggcgtgccgctggacaaaaacggctggccagacgtcgaccataa > 1:9833‑M2/1‑6 (MQ=255) | AGAGATGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCAGGATACTGAAGCCCTGAATGCGATGGGCGTGCCGCTGGACAAAAACGGCTGGCCAGACGTCGACCA > NC_000913/3018204‑3018491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |