Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,413,7510AC43.1% 84.3 / 25.4 58N59K (AAT→AAGralRRac prophage; restriction alleviation protein
Reads supporting (aligned to +/- strand):  ref base A (9/24);  new base C (25/0);  total (34/24)
Fisher's exact test for biased strand distribution p-value = 3.10e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGA  >  NC_000913/1413602‑1413901
                                                                                                                                                      |                                                                                                                                                       
gCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCa                                                                                                                                                         <  2:512789/150‑1 (MQ=255)
   ctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATAAGAAAACCTCCcttat                                                                                                                                                     >  2:69794/1‑151 (MQ=255)
      tGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTATACTAACACCACCattttttt                                                                                                                                                  >  1:351620/1‑149 (MQ=255)
       ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCattattatt                                                                                                                                                 <  1:911878/151‑1 (MQ=255)
         aaaCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTc                                                                                                                                               <  2:286325/151‑1 (MQ=255)
              ccTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTCATTAAAACCTCCCTtttttttttcctt                                                                                                                                           >  2:611310/1‑145 (MQ=255)
                         tttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTAt                                                                                                                                <  1:940010/150‑1 (MQ=255)
                          ttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTTATGAACACCCCCCCTATTTTTTTCACTGGtttggttttt                                                                                                                               >  2:957931/1‑142 (MQ=255)
                          ttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTAATTAACACCTCCCTTATTATTTTCAGTGGGTCGtttttt                                                                                                                               >  1:654637/1‑150 (MQ=255)
                          ttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTAtt                                                                                                                               <  2:222931/150‑1 (MQ=255)
                            aCCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTGATTTTTTATATGAAAACCTCCCCTATTTTTTTTCGTGGGTCGttttttt                                                                                                                              >  2:802922/1‑148 (MQ=255)
                            aCCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTACAAGAACACCCCCCTTATTATTTTCAGTGGGTCGtttttttc                                                                                                                             >  1:425509/1‑148 (MQ=255)
                                gagaGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTAAATGAAAACCCCCCTTATTTTTTTCAGTGGGTCGGTTTTTTCATCtt                                                                                                                        >  1:341364/1‑151 (MQ=255)
                                   agCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTc                                                                                                                      <  1:462813/150‑1 (MQ=255)
                                    gCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCTCCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCgt                                                                                                                    <  2:714959/151‑2 (MQ=255)
                                     cATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAg                                                                                                                   <  1:827609/151‑1 (MQ=255)
                                      aTTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTAATTAAAACCCCCCTTATTTTTTTCAGTGGGTTGttttttttattttttttgt                                                                                                                  >  2:538736/1‑138 (MQ=255)
                                        tttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATTAAAACCCCCCTTTTTTTTTTCTGTGGTTTGTTTTTTTCATCTTTTGAGTg                                                                                                                 >  2:259769/1‑150 (MQ=255)
                                           ttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGCCATTTTTTTCATGAACACCTCCATTATTTTTTTCCGTGGGTCGTTTTTTTCATCTTTTTAGTGcttc                                                                                                             >  1:84109/1‑151 (MQ=255)
                                            tCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGcttc                                                                                                             <  1:467497/150‑1 (MQ=255)
                                               cATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATTAAAAACCCCCATTTTATTTTCCATGGGTTGTTTTTTTCATCTTTTTAGTGGTtttttt                                                                                                         >  1:607951/1‑151 (MQ=255)
                                                  tCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATGAACAACTCCCTTTTTATTTTCAGTGGTTTGTTTTTTTTCTCTTTCTAGGGGTTCttttt                                                                                                        >  2:31077/1‑149 (MQ=255)
                                                   cTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTTATTTTTTTTATTAAAACCCCCCCTTTTTTTTTCATTGGGTTGTTTTTTTCATTTTTTCTGTGGttttttttt                                                                                                       >  2:599522/1‑148 (MQ=255)
                                                     gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATGAACACCCCCCTTTTTTTTTTCTATGGGTCGTTTTTTTCATCTTTTCAGTGCTTCtttttt                                                                                                       >  1:449273/1‑146 (MQ=255)
                                                     gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCAc                                                                                                     <  1:775182/149‑1 (MQ=255)
                                                       tttCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATTAACACCCCCCTTATTTTTTTCAGTGGGTCGTTTTTTTCATCTTTTTAGGGCttttttttttctt                                                                                                   >  1:335742/1‑144 (MQ=255)
                                                         tCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATAAAAAACTCCCTTATTATTTTCATTGGGTTTTTTTTTTCATCTTTTTCGTGCTTCtttttttctttccc                                                                                               >  1:753480/1‑142 (MQ=255)
                                                         tCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTcca                                                                                               <  2:503147/150‑1 (MQ=255)
                                                             tAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTTAATGAAAACCCCCCTTATTTTTTTTAGTGGGTCGGTTATTTCATTTTTTTAGTGCTTCtttttttctttc                                                                                                 >  1:746425/1‑138 (MQ=255)
                                                                tttAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTATATGAAAAACCCCCTTTTTTTTTTCAGTGGGTCGTTTTTTTCATCTTTTTAGTGCttttttttttctttcccc                                                                                              >  1:266075/1‑135 (MQ=255)
                                                                      ttttGAATATCTTGTCCAGTTAGTAGGAGTGCCATCTTCCTTTTCAATAGTGGCGGTTATTTTTTAAATTAACACCTCCCTTTTTTTTTTCAGTGGGTTGTTTTTTTTCTCTTTTTAGTGGTTTTTTTTTTCTTTCCCCCTTAACCgtt                                                                                    >  2:909941/1‑147 (MQ=255)
                                                                            atatCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATTAAAAACCCCCTTTTTTTTTTCCGTGGGTCGGTTTTTTCCTCTTTTGAGGGGTTTTTTTTTTCTTTCCCCCTAACCGGGTTGGGGtt                                                                            >  1:302790/1‑150 (MQ=255)
                                                                                  tGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCa                                                                        <  2:613908/148‑1 (MQ=255)
                                                                                  tGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTTTAAAAGAACAACCCCCCTATTATTTTCAGTGGGTTGTTTTTTTCCTCTTTTGTGTGCTTTTTTTTTTCTTTCCCCCTAAACCGGTCgggggttgccttc                                                                     >  1:607359/1‑141 (MQ=255)
                                                                                   gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATcc                                                                     <  1:431189/150‑1 (MQ=255)
                                                                                      cAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACAAGAAAACCCCCCCTTTTTTTTTCCGTGGGTTGTTTTTTTTCTCTTTTCTGTGCTTCTTTTTTTCTTCTCCCATAAACCGTTCcggggttgcctccctt                                                                  >  1:515545/1‑137 (MQ=255)
                                                                                          tagtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTACATGAAAAACCCCCTTATTTTTTTCAGTGGGTTGTTTTTTTCCTCTTTTGAGTGCTTCTTTTTTTCTTTCCCCCTAAACGGGTTGGGGTTTGCATCCgcttca                                                               >  1:740402/1‑144 (MQ=255)
                                                                                          tagtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAAATTTATAAATGAAAACCCCCCCTTTTTTTTTTAGTGGTTTGTTTTTTTCCTTTTTTCTGTGCTTTTTTTTCACTTTCCCCCAAAACGGTTCGGGATTCGCCTCCGtt                                                                  >  2:541931/1‑146 (MQ=255)
                                                                                            gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTc                                                           <  2:197024/151‑1 (MQ=255)
                                                                                            gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTc                                                           <  2:266852/151‑1 (MQ=255)
                                                                                              agGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTTTAAATGAAAACCCCCCTTTTTTTTTTCAGTGGGTCGTTTTTTTCTTCTTTCGAGTGCTTTTTTTTTTCTTCCACCATAACCCGGTTGGGGGTCGCATTCCTTaca                                                               >  1:720411/1‑145 (MQ=255)
                                                                                              agGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCg                                                          <  2:73337/150‑1 (MQ=255)
                                                                                                  gTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCgg                                                     <  1:469909/151‑1 (MQ=255)
                                                                                                    gCCACCTTCCTTTTCAATAGTGGCGGCCATTTTTTTCAAGAACACCTCCCCTATTTTTTCTTGGGGGTCGGTTTTTTCATCTTTCTGGTGCTTTTTTTTTATTTTCACCACAACCCGATTGGGGGTCCCATTCGTTaaac                                                              >  1:363811/1‑140 (MQ=255)
                                                                                                        ccttccttTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAata                                                <  2:654566/150‑1 (MQ=255)
                                                                                                                ttCAATAGTGGCGGTAATTTTTTAAATGAAAACCTCCCTTTTTTTTTTTAGTGGTTCGGTTTTTTCTTTTTTTTGGTGCTTTTTTTTTTCTTTCCCCATAAACGGTTTCGGGTTTGCATCCGTTTCACTTCCCCCGGTAatattccgcaa                                        >  2:957727/1‑143 (MQ=255)
                                                                                                                 tCAATAGTGGCGGTAATTTTTTAAATGAAAACCCCCCCTTTTTTTTTCAGTGGGTCGTTTTTTTCATTTTTTTAGTGCTTTTTTTTTTCTTTCACCATAACCCGTTTGGGGTTTGCCTCCGTTTCACTTCTCTCGGTAATATTCTGaaa                                        >  2:400767/1‑149 (MQ=255)
                                                                                                                  cAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATg                                      <  1:805760/150‑1 (MQ=255)
                                                                                                                      aGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCtt                                  <  2:667769/150‑1 (MQ=255)
                                                                                                                          gCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAcc                             >  2:410655/1‑151 (MQ=255)
                                                                                                                          gCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAcc                             >  2:621973/1‑151 (MQ=255)
                                                                                                                          gCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAca                             <  2:495778/151‑2 (MQ=255)
                                                                                                                            ggTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGt                           >  2:504674/1‑151 (MQ=255)
                                                                                                                             gTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGtt                          >  1:445801/1‑151 (MQ=255)
                                                                                                                             gTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGtt                          <  2:247666/151‑1 (MQ=255)
                                                                                                                               aaTTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTAc                        <  1:640773/151‑1 (MQ=255)
                                                                                                                                   ttATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGa                     <  2:503572/150‑1 (MQ=255)
                                                                                                                                    tataCATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAt                    <  1:370494/150‑1 (MQ=255)
                                                                                                                                      taCATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATgg                  >  2:314548/1‑150 (MQ=255)
                                                                                                                                              acacCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACcac          >  2:789176/1‑151 (MQ=255)
                                                                                                                                                    ccATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAAt     <  2:535864/150‑1 (MQ=255)
                                                                                                                                                    ccATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATg    >  2:64089/1‑151 (MQ=255)
                                                                                                                                                      attattattTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATgg   >  1:443066/1‑150 (MQ=255)
                                                                                                                                                      attattattTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGa  <  1:273926/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                       
GCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTAATTTTATACATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTATTCCATCTTTCGAGTGCTTCTTTTTCACTTCCACCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGA  >  NC_000913/1413602‑1413901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: