Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,781,645	0	A	C	43.7%	124.8 / 13.1	72	V361G (GTT→GGT)	ypjA	adhesin‑like autotransporter
Reads supporting (aligned to +/- strand):  ref base A (38/2);  new base C (0/31);  total (38/34)
Fisher's exact test for biased strand distribution p-value = 4.17e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TATAATTGTTGTGTCAGCTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTGTCTGCC  >  NC_000913/2781500‑2781791                                                                                                                                                  |                                                                                                                                                   tataATTGTTTTGTCAGCTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATACcccc                                                                                                                                                <  2:917550/150‑1 (MQ=255)         ttgtGTCAGCTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATc                                                                                                                                       >  2:212507/1‑151 (MQ=255)                  cTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGt                                                                                                                              >  2:421315/1‑151 (MQ=255)                  cTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGt                                                                                                                              >  2:82439/1‑151 (MQ=255)                    ttCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCg                                                                                                                            >  1:666826/1‑151 (MQ=255)                     ccccGCCGTTTTTGATTTTTGTCGTTCCGTTGTTGATTTTGGTGCTTGGGGCTGTGCTATAATTATTAATTCTTTGTGTTCCCCTATTAATTAGTATTTTTGCCTCTTTCCTTGAACCACCCATCCCCCCGCCATTATCTATTCGGGTc                                                                                                                             <  2:1040821/148‑1 (MQ=255)                        cgccgcTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCg                                                                                                                            >  2:362337/1‑147 (MQ=255)                         gccgcTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATc                                                                                                                        >  2:912698/1‑150 (MQ=255)                              ttttatttttttGCTTTCTGTTTTTGATATTGGCGCCTGTGCCTTTGCTATAATTATAAATATTTTGTGCCCCACCATTAATTTTGGTTTTTGTCGTGTTTCCGGCAACTTCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCtt                                                                                                                   <  2:978702/142‑1 (MQ=255)                               tttGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCttt                                                                                                                  >  2:921030/1‑150 (MQ=255)                                ttGATTTTTTGCGTTCCGTTGTTGATATTGGTGCCTTTGGCTATCCCATATTTATAAATTTTCTGTGTCCCCCCATTAATTTTGTTTTTTGTCGCTTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTa                                                                                                                 <  2:372115/150‑1 (MQ=255)                                ttGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCttt                                                                                                                  >  2:899877/1‑149 (MQ=255)                                  gATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGc                                                                                                               >  2:1012326/1‑150 (MQ=255)                                      ttttGCGTTCCGCTTTTGATTTTGGTGCCTGTGGTTATGCAATAATTATTAATATTCTGTGTCCCACCATTATTTATGTTTTTTGTCGCTTTTCCGGCAACACCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCAtt                                                                                                            <  2:878593/149‑1 (MQ=255)                                      ttttGCGTTCCGCTGTTGATATTGGTGCTTGTGGCTATGCAATAATTATTAATATTCTGTGTCCCCCCATTAATTAGGGTTTTTGTCGCTTTTCCTGCAACACCAAAACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTg                                                                                                           <  1:457014/150‑1 (MQ=255)                                       tttGCGTTCCTTTTTTGATTTTGGTGCTTGTGCCTATCCCATATTTTTTAATTTTCTGTGTCCCCCCTTTATTTATGTTATTTGTCGCTTTTCCTGCACCACCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTgg                                                                                                          <  2:611030/150‑1 (MQ=255)                                          gCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTa                                                                                                       >  2:915870/1‑150 (MQ=255)                                          gCGTCCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATATTTATTAATATTCTGTGTGCCACCATTAATTATGGTTTTTGTCGCTTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGtt                                                                                                        <  1:613335/149‑1 (MQ=255)                                            gTTCCGCTTTTGATATTGGTCCCTGTGTCTTTTCCATAATTATTAATATTTTGTGGGCCTCAATTAATTTTGTTTTTTGGCGTTTTCCTTGCAACACCCACACCACCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTa                                                                                                       <  1:904554/148‑1 (MQ=255)                                              tCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACt                                                                                                  >  2:577407/1‑151 (MQ=255)                                               ccGCTGTTTATTTTGTTCCCTGTGTTTATGCCATATTTATAAATATTCTTTGTCCCCCCATTAATTTGGTTTTTTGTCGCTTTCCCCGCAACATCAAAACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTaa                                                                                                      <  2:1005697/146‑1 (MQ=255)                                               ccGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTg                                                                                                 >  1:299026/1‑151 (MQ=255)                                                  cTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGAc                                                                                               >  1:432752/1‑150 (MQ=255)                                                   tGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACAt                                                                                             >  2:201410/1‑151 (MQ=255)                                                     ttGATTTTGGTGCTTGGGGCTATGCCTTATTTATAAATTTTCTGTGTCCCCCCATAATTTATGTTTTTTGTCGCTTTTCCTGCAACATCAATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACt                                                                                                  <  2:25363/144‑1 (MQ=255)                                                      tGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGt                                                                                          >  1:102100/1‑151 (MQ=255)                                                         tatTGGTGCCTGTGGTTATGCCATAATTATTAATATTCTGTGTCCCCCCTTTAATTATGTTATTTGTCGCTTTTCCTGCAACACCAATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTc                                                                                        <  2:299016/150‑1 (MQ=255)                                                           ttGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCTTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCt                                                                                      <  1:943507/150‑1 (MQ=255)                                                             ggTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTTTTTGTCGCGTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTa                                                                                   <  1:82441/151‑1 (MQ=255)                                                               tGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATc                                                                                 >  2:193443/1‑151 (MQ=255)                                                                 ccTGTGGTTATGCATTATTTATTAATATTCTGGGTCCCACCTTTAATTATGTTTTTTGTCGCTTTTCCTGCAACACCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATc                                                                                 <  1:753655/149‑1 (MQ=255)                                                                 ccTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCtt                                                                               >  1:593570/1‑151 (MQ=255)                                                                 ccTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCtt                                                                               >  2:839778/1‑151 (MQ=255)                                                                      ggCTTTGCTATAATTATTAATTTTCTGTGTCCCCCCATTAATTATGTTTTTTGTCGCGTTTCCTGCAACACCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTtaat                                                                           <  2:414263/150‑1 (MQ=255)                                                                      ggCTATCCCATAATTATAAATATTCTGTGTGCCCCCATTAATTATGGTTTTTGTCGCTTTTCCTGAAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCttt                                                                              <  1:506361/147‑1 (MQ=255)                                                                         tATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATc                                                                       >  2:495101/1‑151 (MQ=255)                                                                          aTGCCATAATTATTATTATTCTGTGTCCCACTTTTAATTATGTTTTTGGTGGCTTTCCCACCAACTCCCAAACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTaataat                                                                        <  1:639014/149‑1 (MQ=255)                                                                            gCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTc                                                                    >  1:903162/1‑151 (MQ=255)                                                                                  attattAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGttt                                                              >  2:174748/1‑151 (MQ=255)                                                                                   ttattaATTTTCTGTGTGCCACCATTATTTATGGTATTTGTCGCTTTCCCTGCAAAATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGttt                                                              <  1:982807/150‑1 (MQ=255)                                                                                   ttataaATTTTCTGTGCGCCACTATTAATTATGGTTTTTGCTGCTTTTCTTCAATCACCCATAGCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGttt                                                              <  1:1054789/150‑1 (MQ=255)                                                                                      ttaATATTCTGTGTGCCACCATTAATTTTGTTTTTTGTCGTTTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGc                                                            <  2:270007/149‑1 (MQ=255)                                                                                       taATATTTTGTGCCCCCCCATAAATTTTGGTTTTTGTGGCGTTTCCCCCTCAATCCATACCCCCGCCATTATCTATTCGGGTCTCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCg                                                          <  2:1004383/150‑1 (MQ=255)                                                                                       taATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTCTCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCg                                                          >  2:921545/1‑150 (MQ=255)                                                                                          tatTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAAcc                                                      >  1:431414/1‑151 (MQ=255)                                                                                               tgtgtcCCCCCTTTATTTATGTTTTTTGTCGCTTTTCCTGAAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCTTTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCatat                                                  <  1:1087603/150‑1 (MQ=255)                                                                                                 tgtgCCACCATTTTTTTGGGTTTTTGCCCCTTTTCCTGCAACATAAATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATg                                                 <  2:1047716/149‑1 (MQ=255)                                                                                                 tgtcCCACAATTAATTATGGTTTTTGTCGGTTTCCCTGCAACACCCAAACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCatat                                                  <  1:899902/148‑1 (MQ=255)                                                                                                 tcccccccctttaattaTGTTTTTTGTCGCTTTTCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGc                                                <  2:9658/140‑1 (MQ=255)                                                                                                 gttcccaccaTTAATTATGTTTTTTGTCCTTTTTCCTCCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATg                                                 <  2:1087286/145‑1 (MQ=255)                                                                                                   tgCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGtt                                             >  1:455365/1‑151 (MQ=255)                                                                                                    gCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGttt                                            >  1:996855/1‑151 (MQ=255)                                                                                                        ccaTTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGt                                        >  1:661648/1‑151 (MQ=255)                                                                                                           ttaattaTGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCt                                      >  2:562697/1‑150 (MQ=255)                                                                                                            taattaTGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTa                                     >  1:476761/1‑150 (MQ=255)                                                                                                             atttaTGGTATTTGTCGCTTTTCCTGAAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTaa                                    <  1:374823/148‑1 (MQ=255)                                                                                                             aattaTGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTaa                                    >  1:1094565/1‑150 (MQ=255)                                                                                                                  tGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGac                               >  2:689924/1‑150 (MQ=255)                                                                                                                            cgcgTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTcc                    >  1:33522/1‑151 (MQ=255)                                                                                                                             gcgTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTcc                    >  2:584656/1‑150 (MQ=255)                                                                                                                              cgTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTcc                    >  1:714977/1‑149 (MQ=255)                                                                                                                                tttCCTGCAACTCCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGttt                       <  2:546709/144‑1 (MQ=255)                                                                                                                                tttCCTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTcc                    <  1:913772/147‑1 (MQ=255)                                                                                                                                tttCCGGCAACATCAATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAg                  <  2:992062/149‑1 (MQ=255)                                                                                                                                   ccTGCAACATCCATACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCaa               <  1:212507/149‑1 (MQ=255)                                                                                                                                    cTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAacac            >  1:126147/1‑151 (MQ=255)                                                                                                                                    cTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAacac            >  1:472310/1‑151 (MQ=255)                                                                                                                                        aaCATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTg        >  2:715308/1‑151 (MQ=255)                                                                                                                                            tCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTGTCTg    >  2:620290/1‑151 (MQ=255)                                                                                                                                             ccATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTg        <  2:151578/146‑1 (MQ=255)                                                                                                                                               aTACCCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTGTCTGc   <  1:983297/149‑1 (MQ=255)                                                                                                                                                tAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTGTCTGcc  >  2:334517/1‑149 (MQ=255)                                                                                                                                                  aCCCCGCCATTATCTATTCGGGGCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAAGAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACTCATGGTCt     <  2:713254/144‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TATAATTGTTGTGTCAGCTTTCCCGCCGCTTTTGATATTTTGCGTTCCGCTGTTGATATTGGTGCCTGTGGCTATGCCATAATTATTAATATTCTGTGTGCCACCATTAATTATGGTATTTGTCGCGTTTCCTGCAACATCCATAACCCCGCCATTATCTATTCGGGTCGCATCAGCTTTAGCATTGGTTAAAACTGACATTGTTCCTTTATCTTTAATAATCGTCTTGTTTGCCGAACCATATGCGTTTATGTCTAAATGACCACCGTTTTCCAGCAACACATTGTCTGCC  >  NC_000913/2781500‑2781791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑